RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 ARID2Q68CP9 1835 aa23.48■■□□□ 1.35
LSM6-207ENST00000515311 MYCNP04198 464 aaPredicted RBP23.48■■□□□ 1.35
LSM6-207ENST00000515311 PRKCEQ02156 737 aa23.48■■□□□ 1.35
LSM6-207ENST00000515311 GRB10Q13322 594 aa23.48■■□□□ 1.35
LSM6-207ENST00000515311 KARSQ15046 597 aaKnown RBP23.48■■□□□ 1.35
LSM6-207ENST00000515311 FSIP1Q8NA03 581 aa23.48■■□□□ 1.35
LSM6-207ENST00000515311 RASSF8Q8NHQ8 419 aa23.48■■□□□ 1.35
LSM6-207ENST00000515311 KAT2BQ92831 832 aa23.48■■□□□ 1.35
LSM6-207ENST00000515311 PNMA5Q96PV4 448 aa23.48■■□□□ 1.35
LSM6-207ENST00000515311 PYM1Q9BRP8 204 aaKnown RBP23.48■■□□□ 1.35
LSM6-207ENST00000515311 KCNH3Q9ULD8 1083 aa23.48■■□□□ 1.35
LSM6-207ENST00000515311 PHF24Q9UPV7 400 aa23.48■■□□□ 1.35
LSM6-207ENST00000515311 KIAA1024Q9UPX6 916 aa23.48■■□□□ 1.35
LSM6-207ENST00000515311 HAS3O00219 553 aa23.47■■□□□ 1.35
LSM6-207ENST00000515311 GADD45BO75293 160 aaPredicted RBP23.47■■□□□ 1.35
LSM6-207ENST00000515311 TFRCP02786 760 aaKnown RBP23.47■■□□□ 1.35
LSM6-207ENST00000515311 OATP04181 439 aa23.47■■□□□ 1.35
LSM6-207ENST00000515311 XRCC6P12956 609 aaKnown RBP eCLIP23.47■■□□□ 1.35
LSM6-207ENST00000515311 PFKFB1P16118 471 aa23.47■■□□□ 1.35
LSM6-207ENST00000515311 ATP4AP20648 1035 aa23.47■■□□□ 1.35
LSM6-207ENST00000515311 ECM1Q16610 540 aa23.47■■□□□ 1.35
LSM6-207ENST00000515311 XKR3Q5GH77 459 aa23.47■■□□□ 1.35
LSM6-207ENST00000515311 CXCL17Q6UXB2 119 aa23.47■■□□□ 1.35
LSM6-207ENST00000515311 CCDC73Q6ZRK6 1079 aa23.47■■□□□ 1.35
LSM6-207ENST00000515311 ANKLE1Q8NAG6 615 aa23.47■■□□□ 1.35
LSM6-207ENST00000515311 ATP8B4Q8TF62 1192 aa23.47■■□□□ 1.35
LSM6-207ENST00000515311 NACC1Q96RE7 527 aa23.47■■□□□ 1.35
LSM6-207ENST00000515311 LMBRD1Q9NUN5 540 aa23.47■■□□□ 1.35
LSM6-207ENST00000515311 DDX19AQ9NUU7 478 aaKnown RBP23.47■■□□□ 1.35
LSM6-207ENST00000515311 BRCA2P51587 3418 aa23.46■■□□□ 1.35
LSM6-207ENST00000515311 A0A1B0GVL5 298 aa23.46■■□□□ 1.35
LSM6-207ENST00000515311 STBD1O95210 358 aa23.46■■□□□ 1.35
LSM6-207ENST00000515311 PLCG1P19174 1290 aa23.46■■□□□ 1.35
LSM6-207ENST00000515311 MCM4P33991 863 aa23.46■■□□□ 1.35
LSM6-207ENST00000515311 ZRSR1Q15695 479 aaKnown RBP23.46■■□□□ 1.35
LSM6-207ENST00000515311 COL13A1Q5TAT6 717 aaPredicted RBP23.46■■□□□ 1.35
LSM6-207ENST00000515311 CKAP2LQ8IYA6 745 aa23.46■■□□□ 1.35
LSM6-207ENST00000515311 BBXQ8WY36 941 aaPredicted RBP23.46■■□□□ 1.35
LSM6-207ENST00000515311 STK17AQ9UEE5 414 aa23.46■■□□□ 1.35
LSM6-207ENST00000515311 A0A087X0B3 334 aa23.45■■□□□ 1.34
LSM6-207ENST00000515311 DDX11L8A8MPP1 907 aa23.45■■□□□ 1.34
LSM6-207ENST00000515311 MARK3P27448 753 aa23.45■■□□□ 1.34
LSM6-207ENST00000515311 YWHABP31946 246 aaKnown RBP23.45■■□□□ 1.34
LSM6-207ENST00000515311 PSEN2P49810 448 aa23.45■■□□□ 1.34
LSM6-207ENST00000515311 NDUFA8P51970 172 aa23.45■■□□□ 1.34
LSM6-207ENST00000515311 MFSD10Q14728 455 aa23.45■■□□□ 1.34
LSM6-207ENST00000515311 PLCB4Q15147 1175 aa23.45■■□□□ 1.34
LSM6-207ENST00000515311 RRAGBQ5VZM2 374 aa23.45■■□□□ 1.34
LSM6-207ENST00000515311 OTUD6AQ7L8S5 288 aa23.45■■□□□ 1.34
LSM6-207ENST00000515311 RNPEPQ9H4A4 650 aa23.45■■□□□ 1.34
LSM6-207ENST00000515311 GOLPH3LQ9H4A5 285 aa23.45■■□□□ 1.34
LSM6-207ENST00000515311 NRBP2Q9NSY0 501 aa23.45■■□□□ 1.34
LSM6-207ENST00000515311 ANKEF1Q9NU02 776 aa23.45■■□□□ 1.34
LSM6-207ENST00000515311 DBR1Q9UK59 544 aaKnown RBP23.45■■□□□ 1.34
LSM6-207ENST00000515311 DNM3Q9UQ16 869 aa23.45■■□□□ 1.34
LSM6-207ENST00000515311 KIAA0100Q14667 2235 aaKnown RBP23.45■■□□□ 1.34
LSM6-207ENST00000515311 STAT6P42226 847 aa23.44■■□□□ 1.34
LSM6-207ENST00000515311 FAM160A1Q05DH4 1040 aa23.44■■□□□ 1.34
LSM6-207ENST00000515311 KIAA0753Q2KHM9 967 aa23.44■■□□□ 1.34
LSM6-207ENST00000515311 ANO5Q75V66 913 aa23.44■■□□□ 1.34
LSM6-207ENST00000515311 IQUBQ8NA54 791 aa23.44■■□□□ 1.34
LSM6-207ENST00000515311 GLT1D1Q96MS3 346 aa23.44■■□□□ 1.34
LSM6-207ENST00000515311 NIFKQ9BYG3 293 aaKnown RBP23.44■■□□□ 1.34
LSM6-207ENST00000515311 CUEDC2Q9H467 287 aa23.44■■□□□ 1.34
LSM6-207ENST00000515311 COL1A2P08123 1366 aa23.43■■□□□ 1.34
LSM6-207ENST00000515311 A0A1W2PQ45 241 aaPredicted RBP23.43■■□□□ 1.34
LSM6-207ENST00000515311 A0A1W2PQY0 241 aa23.43■■□□□ 1.34
LSM6-207ENST00000515311 POLR2DO15514 142 aaKnown RBP23.43■■□□□ 1.34
LSM6-207ENST00000515311 HBP1O60381 514 aa23.43■■□□□ 1.34
LSM6-207ENST00000515311 SYKP43405 635 aa23.43■■□□□ 1.34
LSM6-207ENST00000515311 MNX1P50219 401 aaPredicted RBP23.43■■□□□ 1.34
LSM6-207ENST00000515311 PSMC6P62333 389 aa23.43■■□□□ 1.34
LSM6-207ENST00000515311 E2F4Q16254 413 aa23.43■■□□□ 1.34
LSM6-207ENST00000515311 KCNK18Q7Z418 384 aa23.43■■□□□ 1.34
LSM6-207ENST00000515311 PDILTQ8N807 584 aa23.43■■□□□ 1.34
LSM6-207ENST00000515311 PIGOQ8TEQ8 1089 aa23.43■■□□□ 1.34
LSM6-207ENST00000515311 PLIN2Q99541 437 aa23.43■■□□□ 1.34
LSM6-207ENST00000515311 SEPT9Q9UHD8 586 aaPredicted RBP23.43■■□□□ 1.34
LSM6-207ENST00000515311 USP25Q9UHP3 1055 aa23.43■■□□□ 1.34
LSM6-207ENST00000515311 TRPC6Q9Y210 931 aa23.43■■□□□ 1.34
LSM6-207ENST00000515311 PPME1Q9Y570 386 aa23.43■■□□□ 1.34
LSM6-207ENST00000515311 KAT6AQ92794 2004 aa23.42■■□□□ 1.34
LSM6-207ENST00000515311 EYA4O95677 639 aa23.42■■□□□ 1.34
LSM6-207ENST00000515311 TPRNQ4KMQ1 711 aa23.42■■□□□ 1.34
LSM6-207ENST00000515311 NAALADL2Q58DX5 795 aa23.42■■□□□ 1.34
LSM6-207ENST00000515311 FMR1NBQ8N0W7 255 aaPredicted RBP23.42■■□□□ 1.34
LSM6-207ENST00000515311 ENGASEQ8NFI3 743 aa23.42■■□□□ 1.34
LSM6-207ENST00000515311 PANK2Q9BZ23 570 aa23.42■■□□□ 1.34
LSM6-207ENST00000515311 BLOC1S4Q9NUP1 217 aa23.42■■□□□ 1.34
LSM6-207ENST00000515311 E9PMD0 336 aa23.41■■□□□ 1.34
LSM6-207ENST00000515311 ZBTB39O15060 712 aa23.41■■□□□ 1.34
LSM6-207ENST00000515311 PTMSP20962 102 aa23.41■■□□□ 1.34
LSM6-207ENST00000515311 RARRES1P49788 294 aa23.41■■□□□ 1.34
LSM6-207ENST00000515311 TARBP2Q15633 366 aaKnown RBP23.41■■□□□ 1.34
LSM6-207ENST00000515311 NFRKBQ6P4R8 1299 aa23.41■■□□□ 1.34
LSM6-207ENST00000515311 SESTD1Q86VW0 696 aa23.41■■□□□ 1.34
LSM6-207ENST00000515311 LRRC15Q8TF66 581 aa23.41■■□□□ 1.34
LSM6-207ENST00000515311 RAD54LQ92698 747 aa23.41■■□□□ 1.34
LSM6-207ENST00000515311 DHX58Q96C10 678 aa23.41■■□□□ 1.34
LSM6-207ENST00000515311 SEZ6LQ9BYH1 1024 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms