RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 ODF2LQ9ULJ1 636 aa16.32■□□□□ 0.2
NUP54-217ENST00000514987 ATP8B3O60423 1300 aa16.32■□□□□ 0.2
NUP54-217ENST00000514987 GCNT3O95395 438 aa16.31■□□□□ 0.2
NUP54-217ENST00000514987 MOCS3O95396 460 aa16.31■□□□□ 0.2
NUP54-217ENST00000514987 MYBP10242 640 aa16.31■□□□□ 0.2
NUP54-217ENST00000514987 HOXD13P35453 343 aa16.31■□□□□ 0.2
NUP54-217ENST00000514987 MAP3K10Q02779 954 aa16.31■□□□□ 0.2
NUP54-217ENST00000514987 KLHL30Q0D2K2 578 aa16.31■□□□□ 0.2
NUP54-217ENST00000514987 RAPGEF1Q13905 1077 aa16.31■□□□□ 0.2
NUP54-217ENST00000514987 CCDC174Q6PII3 467 aa16.31■□□□□ 0.2
NUP54-217ENST00000514987 FMNL3Q8IVF7 1028 aa16.31■□□□□ 0.2
NUP54-217ENST00000514987 CYP2W1Q8TAV3 490 aa16.31■□□□□ 0.2
NUP54-217ENST00000514987 CAMKK2Q96RR4 588 aa16.31■□□□□ 0.2
NUP54-217ENST00000514987 MKNK1Q9BUB5 465 aa16.31■□□□□ 0.2
NUP54-217ENST00000514987 WDR18Q9BV38 432 aa16.31■□□□□ 0.2
NUP54-217ENST00000514987 PRDM4Q9UKN5 801 aa16.31■□□□□ 0.2
NUP54-217ENST00000514987 PNMA2Q9UL42 364 aa16.31■□□□□ 0.2
NUP54-217ENST00000514987 ZNRF3Q9ULT6 936 aa16.31■□□□□ 0.2
NUP54-217ENST00000514987 DAAM1Q9Y4D1 1078 aa16.31■□□□□ 0.2
NUP54-217ENST00000514987 CAPN6Q9Y6Q1 641 aa16.31■□□□□ 0.2
NUP54-217ENST00000514987 BTNL10A8MVZ5 291 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 TLR2O60603 784 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 SRGAP2O75044 1071 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 RAD17O75943 681 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 PRPF6O94906 941 aaKnown RBP16.3■□□□□ 0.2
NUP54-217ENST00000514987 SLITRK3O94933 977 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 TFRCP02786 760 aaKnown RBP16.3■□□□□ 0.2
NUP54-217ENST00000514987 PAFAH1B1P43034 410 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 GFPT1Q06210 699 aaPredicted RBP16.3■□□□□ 0.2
NUP54-217ENST00000514987 NAB2Q15742 525 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 EXOC3L4Q17RC7 722 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 KIAA1755Q5JYT7 1200 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 GBP6Q6ZN66 633 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 C1orf186Q6ZWK4 172 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 NIPA1Q7RTP0 329 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 TPH2Q8IWU9 490 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 GOLGA5Q8TBA6 731 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 DYDC2Q96IM9 177 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 CAPZA3Q96KX2 299 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 RUSC1Q9BVN2 902 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 TEKT3Q9BXF9 490 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 MLXIPQ9HAP2 919 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 PARVGQ9HBI0 331 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 EP400Q96L91 3159 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 ASTN1O14525 1302 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 FRMPD4Q14CM0 1322 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 SHTN1A0MZ66 631 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 BCRP11274 1271 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 RASSF7Q02833 373 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 CASP8Q14790 479 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 TNIP1Q15025 636 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 IFI16Q16666 785 aaKnown RBP16.3■□□□□ 0.2
NUP54-217ENST00000514987 CCDC181Q5TID7 509 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 KLHDC7AQ5VTJ3 777 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 LDHDQ86WU2 507 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 MCF2L2Q86YR7 1114 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 CREG2Q8IUH2 290 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 NIM1KQ8IY84 436 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 MYCT1Q8N699 235 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 SPAG5Q96R06 1193 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 OSBPL9Q96SU4 736 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 ZNF577Q9BSK1 485 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 CRACR2AQ9BSW2 395 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 VEZTQ9HBM0 779 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 ST7Q9NRC1 585 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 MAP3K20Q9NYL2 800 aaKnown RBP16.3■□□□□ 0.2
NUP54-217ENST00000514987 RGL1Q9NZL6 768 aa16.3■□□□□ 0.2
NUP54-217ENST00000514987 ICAM1P05362 532 aa16.29■□□□□ 0.2
NUP54-217ENST00000514987 ERCC3P19447 782 aa16.29■□□□□ 0.2
NUP54-217ENST00000514987 GUCY2CP25092 1073 aa16.29■□□□□ 0.2
NUP54-217ENST00000514987 PSMC2P35998 433 aaKnown RBP16.29■□□□□ 0.2
NUP54-217ENST00000514987 HSD17B4P51659 736 aa16.29■□□□□ 0.2
NUP54-217ENST00000514987 ZNF131P52739 623 aa16.29■□□□□ 0.2
NUP54-217ENST00000514987 CTTNQ14247 550 aaKnown RBP16.29■□□□□ 0.2
NUP54-217ENST00000514987 TBC1D5Q92609 795 aa16.29■□□□□ 0.2
NUP54-217ENST00000514987 MED4Q9NPJ6 270 aa16.29■□□□□ 0.2
NUP54-217ENST00000514987 PCDHB13Q9Y5F0 798 aa16.29■□□□□ 0.2
NUP54-217ENST00000514987 RSPH10B2B2RC85 870 aa16.28■□□□□ 0.2
NUP54-217ENST00000514987 AKAP3O75969 853 aa16.28■□□□□ 0.2
NUP54-217ENST00000514987 GFPT2O94808 682 aa16.28■□□□□ 0.2
NUP54-217ENST00000514987 RSPH10BP0C881 870 aa16.28■□□□□ 0.2
NUP54-217ENST00000514987 UCHL3P15374 230 aa16.28■□□□□ 0.2
NUP54-217ENST00000514987 PON1P27169 355 aa16.28■□□□□ 0.2
NUP54-217ENST00000514987 PRKCIP41743 596 aa16.28■□□□□ 0.2
NUP54-217ENST00000514987 PTGER2P43116 358 aa16.28■□□□□ 0.2
NUP54-217ENST00000514987 NAP1L1P55209 391 aaKnown RBP16.28■□□□□ 0.2
NUP54-217ENST00000514987 GHRHRQ02643 423 aa16.28■□□□□ 0.2
NUP54-217ENST00000514987 MYBPC2Q14324 1141 aa16.28■□□□□ 0.2
NUP54-217ENST00000514987 EZH2Q15910 746 aaKnown RBP16.28■□□□□ 0.2
NUP54-217ENST00000514987 GLE1Q53GS7 698 aaKnown RBP16.28■□□□□ 0.2
NUP54-217ENST00000514987 HSP90B2PQ58FF3 399 aa16.28■□□□□ 0.2
NUP54-217ENST00000514987 B3GNT9Q6UX72 402 aa16.28■□□□□ 0.2
NUP54-217ENST00000514987 HS2ST1Q7LGA3 356 aa16.28■□□□□ 0.2
NUP54-217ENST00000514987 VPS36Q86VN1 386 aa16.28■□□□□ 0.2
NUP54-217ENST00000514987 LPAR1Q92633 364 aa16.28■□□□□ 0.2
NUP54-217ENST00000514987 ZBED3Q96IU2 234 aaPredicted RBP16.28■□□□□ 0.2
NUP54-217ENST00000514987 MXRA8Q9BRK3 442 aa16.28■□□□□ 0.2
NUP54-217ENST00000514987 PDE2AO00408 941 aaPredicted RBP16.27■□□□□ 0.2
NUP54-217ENST00000514987 IPO5O00410 1097 aaKnown RBP16.27■□□□□ 0.2
NUP54-217ENST00000514987 ZNF185O15231 689 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms