RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 TMEM87AQ8NBN3 555 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 ZBTB44Q8NCP5 570 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 PPTC7Q8NI37 304 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 ZCCHC14Q8WYQ9 949 aaKnown RBP3.84□□□□□ -1.79
CHD1-211ENST00000514344 DDX1Q92499 740 aaKnown RBP3.84□□□□□ -1.79
CHD1-211ENST00000514344 SPATA33Q96N06 139 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 IRX2Q9BZI1 471 aaPredicted RBP3.84□□□□□ -1.79
CHD1-211ENST00000514344 RXFP3Q9NSD7 469 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 DDX41Q9UJV9 622 aaKnown RBP3.84□□□□□ -1.79
CHD1-211ENST00000514344 LRFN2Q9ULH4 789 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 SPTA1P02549 2419 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 TBKBP1A7MCY6 615 aa3.84□□□□□ -1.8
CHD1-211ENST00000514344 MYBP10242 640 aa3.84□□□□□ -1.8
CHD1-211ENST00000514344 EPCAMP16422 314 aa3.84□□□□□ -1.8
CHD1-211ENST00000514344 GBP2P32456 591 aaPredicted RBP3.84□□□□□ -1.8
CHD1-211ENST00000514344 ARHGAP4P98171 946 aa3.84□□□□□ -1.8
CHD1-211ENST00000514344 TTBK2Q6IQ55 1244 aa3.84□□□□□ -1.8
CHD1-211ENST00000514344 PSAPL1Q6NUJ1 521 aa3.84□□□□□ -1.8
CHD1-211ENST00000514344 OTOP3Q7RTS5 596 aa3.84□□□□□ -1.8
CHD1-211ENST00000514344 RTN4RL1Q86UN2 441 aaPredicted RBP3.84□□□□□ -1.8
CHD1-211ENST00000514344 TRIM50Q86XT4 487 aa3.84□□□□□ -1.8
CHD1-211ENST00000514344 DNERQ8NFT8 737 aa3.84□□□□□ -1.8
CHD1-211ENST00000514344 MKL1Q969V6 931 aa3.84□□□□□ -1.8
CHD1-211ENST00000514344 ZFP91Q96JP5 570 aaPredicted RBP3.84□□□□□ -1.8
CHD1-211ENST00000514344 C16orf70Q9BSU1 422 aa3.84□□□□□ -1.8
CHD1-211ENST00000514344 AGO3Q9H9G7 860 aaKnown RBP3.84□□□□□ -1.8
CHD1-211ENST00000514344 TYW1Q9NV66 732 aaKnown RBP3.84□□□□□ -1.8
CHD1-211ENST00000514344 PUF60Q9UHX1 559 aaKnown RBP3.84□□□□□ -1.8
CHD1-211ENST00000514344 NOB1Q9ULX3 412 aaKnown RBP3.84□□□□□ -1.8
CHD1-211ENST00000514344 MTF2Q9Y483 593 aaPredicted RBP3.84□□□□□ -1.8
CHD1-211ENST00000514344 MIA3Q5JRA6 1907 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 ATMQ13315 3056 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 LOC102724159A0A0B4J2E5 919 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 N4BP1O75113 896 aaKnown RBP3.83□□□□□ -1.8
CHD1-211ENST00000514344 PPFIA4O75335 1185 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 BCAR3O75815 825 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 GNAI3P08754 354 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 TSPY3P0CV98 308 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 TSPY8P0CW00 308 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 EIF2AK2P19525 551 aaKnown RBP3.83□□□□□ -1.8
CHD1-211ENST00000514344 RARSP54136 660 aaKnown RBP3.83□□□□□ -1.8
CHD1-211ENST00000514344 TMEM62Q0P6H9 643 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 SNW1Q13573 536 aaKnown RBP3.83□□□□□ -1.8
CHD1-211ENST00000514344 LAMC2Q13753 1193 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 PWP2Q15269 919 aaKnown RBP3.83□□□□□ -1.8
CHD1-211ENST00000514344 FAM102BQ5T8I3 360 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 DCLRE1AQ6PJP8 1040 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 NPAS4Q8IUM7 802 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 SLC44A3Q8N4M1 653 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 CLEC4DQ8WXI8 215 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 AUTS2Q8WXX7 1259 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 BBC3Q96PG8 261 aaPredicted RBP3.83□□□□□ -1.8
CHD1-211ENST00000514344 BCO2Q9BYV7 579 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 ADAM33Q9BZ11 813 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 ZSCAN32Q9NX65 697 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 KIAA1217Q5T5P2 1943 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 IGKV6D-41A0A0C4DH26 115 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 B4DLN1 442 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 FSCN2O14926 492 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 GGPS1O95749 300 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 STAG3L1P0CL83 205 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 SRFP11831 508 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 SCG2P13521 617 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 MRPL12P52815 198 aaKnown RBP3.83□□□□□ -1.8
CHD1-211ENST00000514344 ATP8B2P98198 1209 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 SP4Q02446 784 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 TTF1Q15361 905 aaPredicted RBP3.83□□□□□ -1.8
CHD1-211ENST00000514344 STXBP2Q15833 593 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 TMEM266Q2M3C6 531 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 ZNF528Q3MIS6 628 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 AASDHQ4L235 1098 aaPredicted RBP3.83□□□□□ -1.8
CHD1-211ENST00000514344 MYSM1Q5VVJ2 828 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 PDE12Q6L8Q7 609 aaKnown RBP3.83□□□□□ -1.8
CHD1-211ENST00000514344 AACSQ86V21 672 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 COLGALT1Q8NBJ5 622 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 LMBR1Q8WVP7 490 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 MRPS27Q92552 414 aaKnown RBP3.83□□□□□ -1.8
CHD1-211ENST00000514344 TBC1D5Q92609 795 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 ZBTB10Q96DT7 871 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 GMCL1Q96IK5 515 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 TAAR1Q96RJ0 339 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 BCAS3Q9H6U6 928 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 EHMT1Q9H9B1 1298 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 NGRNQ9NPE2 291 aaKnown RBP3.83□□□□□ -1.8
CHD1-211ENST00000514344 IGSF9Q9P2J2 1179 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 ARPP21Q9UBL0 812 aaPredicted RBP3.83□□□□□ -1.8
CHD1-211ENST00000514344 FBXO4Q9UKT5 387 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 FRMPD2Q68DX3 1309 aaPredicted RBP3.83□□□□□ -1.8
CHD1-211ENST00000514344 DOCK8Q8NF50 2099 aa3.83□□□□□ -1.8
CHD1-211ENST00000514344 TEX15Q9BXT5 2789 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 KAT6AQ92794 2004 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 C2orf16Q68DN1 1984 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.82□□□□□ -1.8
CHD1-211ENST00000514344 GIPC1O14908 333 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 TBC1D4O60343 1298 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 NMT2O60551 498 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 CAND2O75155 1236 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 KCNK5O95279 499 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 PRB1P04280 392 aa3.82□□□□□ -1.8
CHD1-211ENST00000514344 NFX1Q12986 1120 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms