RNA–Protein interactions for RNA: ENST00000513433.1

SNX25-206, Transcript of sorting nexin 25, humanhuman

TSL 3

Gene SNX25, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-206ENST00000513433 INVSQ9Y283 1065 aa6.72□□□□□ -1.33
SNX25-206ENST00000513433 ARHGEF28Q8N1W1 1705 aaKnown RBP6.72□□□□□ -1.33
SNX25-206ENST00000513433 RALGAPBQ86X10 1494 aa6.72□□□□□ -1.33
SNX25-206ENST00000513433 TECPR2O15040 1411 aa6.71□□□□□ -1.34
SNX25-206ENST00000513433 PTCH1Q13635 1447 aa6.71□□□□□ -1.34
SNX25-206ENST00000513433 TNFRSF1AP19438 455 aa6.71□□□□□ -1.34
SNX25-206ENST00000513433 STAT5AP42229 794 aa6.71□□□□□ -1.34
SNX25-206ENST00000513433 MAP4K2Q12851 820 aa6.71□□□□□ -1.34
SNX25-206ENST00000513433 SF1Q15637 639 aaKnown RBP6.71□□□□□ -1.34
SNX25-206ENST00000513433 FXNQ16595 210 aa6.71□□□□□ -1.34
SNX25-206ENST00000513433 SV2CQ496J9 727 aa6.71□□□□□ -1.34
SNX25-206ENST00000513433 VPS37DQ86XT2 251 aa6.71□□□□□ -1.34
SNX25-206ENST00000513433 TMEM145Q8NBT3 493 aa6.71□□□□□ -1.34
SNX25-206ENST00000513433 MICAL1Q8TDZ2 1067 aa6.71□□□□□ -1.34
SNX25-206ENST00000513433 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.71□□□□□ -1.34
SNX25-206ENST00000513433 TOE1Q96GM8 510 aaKnown RBP6.71□□□□□ -1.34
SNX25-206ENST00000513433 LCORQ96JN0 433 aaPredicted RBP6.71□□□□□ -1.34
SNX25-206ENST00000513433 CAPN10Q9HC96 672 aa6.71□□□□□ -1.34
SNX25-206ENST00000513433 COA3Q9Y2R0 106 aaPredicted RBP6.71□□□□□ -1.34
SNX25-206ENST00000513433 ADGRF5Q8IZF2 1346 aa6.71□□□□□ -1.34
SNX25-206ENST00000513433 XIRP1Q702N8 1843 aaKnown RBP6.71□□□□□ -1.34
SNX25-206ENST00000513433 B2RBV5 119 aa6.7□□□□□ -1.34
SNX25-206ENST00000513433 DDX3XO00571 662 aaKnown RBP eCLIP6.7□□□□□ -1.34
SNX25-206ENST00000513433 LRG1P02750 347 aa6.7□□□□□ -1.34
SNX25-206ENST00000513433 FGRP09769 529 aa6.7□□□□□ -1.34
SNX25-206ENST00000513433 ECI1P42126 302 aa6.7□□□□□ -1.34
SNX25-206ENST00000513433 SURF1Q15526 300 aa6.7□□□□□ -1.34
SNX25-206ENST00000513433 MCTP2Q6DN12 878 aa6.7□□□□□ -1.34
SNX25-206ENST00000513433 PPIL6Q8IXY8 311 aa6.7□□□□□ -1.34
SNX25-206ENST00000513433 ARRDC4Q8NCT1 418 aa6.7□□□□□ -1.34
SNX25-206ENST00000513433 PHOSPHO1Q8TCT1 267 aa6.7□□□□□ -1.34
SNX25-206ENST00000513433 PPP1R14AQ96A00 147 aa6.7□□□□□ -1.34
SNX25-206ENST00000513433 TMPRSS5Q9H3S3 457 aa6.7□□□□□ -1.34
SNX25-206ENST00000513433 LRRC7Q96NW7 1537 aa6.7□□□□□ -1.34
SNX25-206ENST00000513433 DLC1Q96QB1 1528 aa6.7□□□□□ -1.34
SNX25-206ENST00000513433 B4GALT3O60512 393 aa6.69□□□□□ -1.34
SNX25-206ENST00000513433 LCP1P13796 627 aa6.69□□□□□ -1.34
SNX25-206ENST00000513433 ZNF20P17024 532 aa6.69□□□□□ -1.34
SNX25-206ENST00000513433 ETFBP38117 255 aa6.69□□□□□ -1.34
SNX25-206ENST00000513433 PUM1Q14671 1186 aaKnown RBP eCLIP6.69□□□□□ -1.34
SNX25-206ENST00000513433 PRSS53Q2L4Q9 553 aa6.69□□□□□ -1.34
SNX25-206ENST00000513433 STEAP3Q658P3 488 aa6.69□□□□□ -1.34
SNX25-206ENST00000513433 ZNF772Q68DY9 489 aaPredicted RBP6.69□□□□□ -1.34
SNX25-206ENST00000513433 TEPPQ6URK8 271 aa6.69□□□□□ -1.34
SNX25-206ENST00000513433 TTLL11Q8NHH1 800 aa6.69□□□□□ -1.34
SNX25-206ENST00000513433 SMOC1Q9H4F8 434 aa6.69□□□□□ -1.34
SNX25-206ENST00000513433 EPB41L1Q9H4G0 881 aa6.69□□□□□ -1.34
SNX25-206ENST00000513433 WASF3Q9UPY6 502 aa6.69□□□□□ -1.34
SNX25-206ENST00000513433 TBX22Q9Y458 520 aa6.69□□□□□ -1.34
SNX25-206ENST00000513433 MRVI1Q9Y6F6 885 aa6.69□□□□□ -1.34
SNX25-206ENST00000513433 NALCNQ8IZF0 1738 aa6.69□□□□□ -1.34
SNX25-206ENST00000513433 METP08581 1390 aa6.69□□□□□ -1.34
SNX25-206ENST00000513433 GPRASP1Q5JY77 1395 aa6.69□□□□□ -1.34
SNX25-206ENST00000513433 PTPRUQ92729 1446 aa6.68□□□□□ -1.34
SNX25-206ENST00000513433 CYP7B1O75881 506 aa6.68□□□□□ -1.34
SNX25-206ENST00000513433 SSBP05455 408 aaKnown RBP eCLIP6.68□□□□□ -1.34
SNX25-206ENST00000513433 SLC10A6Q3KNW5 377 aa6.68□□□□□ -1.34
SNX25-206ENST00000513433 LARP1BQ659C4 914 aaKnown RBP6.68□□□□□ -1.34
SNX25-206ENST00000513433 RSPO2Q6UXX9 243 aaPredicted RBP6.68□□□□□ -1.34
SNX25-206ENST00000513433 EEPD1Q7L9B9 569 aa6.68□□□□□ -1.34
SNX25-206ENST00000513433 STK32CQ86UX6 486 aa6.68□□□□□ -1.34
SNX25-206ENST00000513433 WRNIP1Q96S55 665 aa6.68□□□□□ -1.34
SNX25-206ENST00000513433 TMEM209Q96SK2 561 aa6.68□□□□□ -1.34
SNX25-206ENST00000513433 GPR27Q9NS67 375 aa6.68□□□□□ -1.34
SNX25-206ENST00000513433 LRP2BPQ9P2M1 347 aa6.68□□□□□ -1.34
SNX25-206ENST00000513433 PCDHB4Q9Y5E5 795 aa6.68□□□□□ -1.34
SNX25-206ENST00000513433 PCDHA2Q9Y5H9 948 aa6.68□□□□□ -1.34
SNX25-206ENST00000513433 ADGRB2O60241 1585 aa6.68□□□□□ -1.34
SNX25-206ENST00000513433 YTHDC2Q9H6S0 1430 aaKnown RBP6.67□□□□□ -1.34
SNX25-206ENST00000513433 MATN3O15232 486 aa6.67□□□□□ -1.34
SNX25-206ENST00000513433 IL13P35225 146 aa6.67□□□□□ -1.34
SNX25-206ENST00000513433 PLEKHH3Q7Z736 793 aa6.67□□□□□ -1.34
SNX25-206ENST00000513433 C14orf93Q9H972 538 aaKnown RBP6.67□□□□□ -1.34
SNX25-206ENST00000513433 QRICH2Q9H0J4 1663 aa6.67□□□□□ -1.34
SNX25-206ENST00000513433 LRPPRCP42704 1394 aaKnown RBP6.67□□□□□ -1.34
SNX25-206ENST00000513433 FAM135BQ49AJ0 1406 aa6.67□□□□□ -1.34
SNX25-206ENST00000513433 CDC42BPGQ6DT37 1551 aa6.66□□□□□ -1.34
SNX25-206ENST00000513433 LAMTOR5O43504 91 aa6.66□□□□□ -1.34
SNX25-206ENST00000513433 DGKIO75912 1065 aa6.66□□□□□ -1.34
SNX25-206ENST00000513433 DDAH1O94760 285 aa6.66□□□□□ -1.34
SNX25-206ENST00000513433 GJB6O95452 261 aa6.66□□□□□ -1.34
SNX25-206ENST00000513433 EPHB4P54760 987 aa6.66□□□□□ -1.34
SNX25-206ENST00000513433 MLLT6P55198 1093 aaPredicted RBP6.66□□□□□ -1.34
SNX25-206ENST00000513433 PROSER1Q86XN7 944 aa6.66□□□□□ -1.34
SNX25-206ENST00000513433 DNERQ8NFT8 737 aa6.66□□□□□ -1.34
SNX25-206ENST00000513433 ZCCHC14Q8WYQ9 949 aaKnown RBP6.66□□□□□ -1.34
SNX25-206ENST00000513433 DVL3Q92997 716 aaPredicted RBP6.66□□□□□ -1.34
SNX25-206ENST00000513433 C8orf49Q96NF6 230 aa6.66□□□□□ -1.34
SNX25-206ENST00000513433 CLIC6Q96NY7 704 aa6.66□□□□□ -1.34
SNX25-206ENST00000513433 CLDND1Q9NY35 253 aa6.66□□□□□ -1.34
SNX25-206ENST00000513433 PPP4R1LQ9P1A2 415 aa6.66□□□□□ -1.34
SNX25-206ENST00000513433 ASH2LQ9UBL3 628 aa6.66□□□□□ -1.34
SNX25-206ENST00000513433 ROCK2O75116 1388 aaKnown RBP6.66□□□□□ -1.34
SNX25-206ENST00000513433 ABCC11Q96J66 1382 aa6.66□□□□□ -1.34
SNX25-206ENST00000513433 NCOA3Q9Y6Q9 1424 aa6.66□□□□□ -1.34
SNX25-206ENST00000513433 A0A1W2PQU0 124 aa6.65□□□□□ -1.34
SNX25-206ENST00000513433 MAFKO60675 156 aa6.65□□□□□ -1.34
SNX25-206ENST00000513433 COL6A1P12109 1028 aa6.65□□□□□ -1.34
SNX25-206ENST00000513433 KCNA6P17658 529 aa6.65□□□□□ -1.34
SNX25-206ENST00000513433 ERCC5P28715 1186 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms