RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 TFIP11Q9UBB9 837 aaKnown RBP8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 ZNF215Q9UL58 517 aaPredicted RBP8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 PCDHA10Q9Y5I2 948 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 IGSF9BQ9UPX0 1349 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 DNAH12Q6ZR08 3092 aa8.52□□□□□ -1.04
HMGXB3-204ENST00000513318 IGKV6D-21A0A0A0MT36 114 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 VWA3AA6NCI4 1184 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 EML1O00423 815 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 BACH1O14867 736 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 SPTLC2O15270 562 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 DKC1O60832 514 aaKnown RBP eCLIP8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 PPP6R2O75170 966 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 LGR5O75473 907 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 CABYRO75952 493 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 F2P00734 622 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 ASGR1P07306 291 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 PSAPP07602 524 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 MYL3P08590 195 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 ZNF286BP0CG31 522 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 MARCKSP29966 332 aaPredicted RBP8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 TECP42680 631 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 SLC26A2P50443 739 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 ACLYP53396 1101 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 PDIA5Q14554 519 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 EPHA7Q15375 998 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 KCNA10Q16322 511 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 TSR1Q2NL82 804 aaKnown RBP8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 C6orf132Q5T0Z8 1188 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 FAM160B1Q5W0V3 765 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 SMYD5Q6GMV2 418 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 CCDC60Q8IWA6 550 aaPredicted RBP8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 ERMNQ8TAM6 284 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 AFAP1L1Q8TED9 768 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 ATP6V0A1Q93050 837 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 SPATA32Q96LK8 384 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 GLT1D1Q96MS3 346 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 MTG1Q9BT17 334 aaPredicted RBP8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 SCAND2PQ9GZW5 306 aaPredicted RBP8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 SMARCAD1Q9H4L7 1026 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 AZI2Q9H6S1 392 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 PHF24Q9UPV7 400 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 TELO2Q9Y4R8 837 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 SRPRBQ9Y5M8 271 aaKnown RBP8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 LTBP2Q14767 1821 aa8.52□□□□□ -1.05
HMGXB3-204ENST00000513318 SCN5AQ14524 2016 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 A0A1W2PQ45 241 aaPredicted RBP8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 A0A1W2PQY0 241 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 H3BRB1 525 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 HAS3O00219 553 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 MAP3K7O43318 606 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 CUTAO60888 179 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 MUTP22033 750 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 LONP1P36776 959 aaKnown RBP8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 PSEN2P49810 448 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 STAT5BP51692 787 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 UTP14CQ5TAP6 766 aaKnown RBP8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 CXCL17Q6UXB2 119 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 PLPPR4Q7Z2D5 763 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 TRIM50Q86XT4 487 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 KRI1Q8N9T8 703 aaKnown RBP8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 GLG1Q92896 1179 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 FAM167AQ96KS9 214 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 PCYT2Q99447 389 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 EIF2AK1Q9BQI3 630 aaKnown RBP8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 LXNQ9BS40 222 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 C16orf70Q9BSU1 422 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 TUT1Q9H6E5 874 aaKnown RBP8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 STARD7Q9NQZ5 370 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 ZNF302Q9NR11 478 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 ERAP1Q9NZ08 941 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 LRWD1Q9UFC0 647 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 FBXO2Q9UK22 296 aaPredicted RBP8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 RCOR1Q9UKL0 485 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 KDM3AQ9Y4C1 1321 aa8.51□□□□□ -1.05
HMGXB3-204ENST00000513318 A0A0U1RQG5 324 aaPredicted RBP8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 ARHGAP33O14559 1287 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 SLC26A4O43511 780 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 P4HBP07237 508 aaKnown RBP8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 TXLNAP40222 546 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 QARSP47897 775 aaKnown RBP8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 PSMC5P62195 406 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 CYP4A11Q02928 519 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 GRIN1Q05586 938 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 IL17AQ16552 155 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 UGCGQ16739 394 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 CSPP1Q1MSJ5 1256 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 KRT79Q5XKE5 535 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 SWSAP1Q6NVH7 229 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 PDXDC2PQ6P474 469 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 NECAB2Q7Z6G3 386 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 BANK1Q8NDB2 785 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 SNX29Q8TEQ0 813 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 LEO1Q8WVC0 666 aaPredicted RBP8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 KAT2BQ92831 832 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 TNPO1Q92973 898 aaKnown RBP8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 CHAMP1Q96JM3 812 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 KCNK17Q96T54 332 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 POLR3CQ9BUI4 534 aaPredicted RBP8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 SEZ6LQ9BYH1 1024 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 KRTAP3-3Q9BYR6 98 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms