RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 ECHDC1Q9NTX5 307 aa14.41□□□□□ -0.1
SDHA-215ENST00000512962 PLXNA4Q9HCM2 1894 aa14.4□□□□□ -0.1
SDHA-215ENST00000512962 TSPY2A6NKD2 308 aa14.4□□□□□ -0.1
SDHA-215ENST00000512962 SORBS3O60504 671 aa14.4□□□□□ -0.1
SDHA-215ENST00000512962 EFCAB14O75071 495 aa14.4□□□□□ -0.1
SDHA-215ENST00000512962 PARNO95453 639 aaKnown RBP14.4□□□□□ -0.1
SDHA-215ENST00000512962 GH1P01241 217 aa14.4□□□□□ -0.1
SDHA-215ENST00000512962 AMHP03971 560 aa14.4□□□□□ -0.1
SDHA-215ENST00000512962 GNAT2P19087 354 aa14.4□□□□□ -0.1
SDHA-215ENST00000512962 GRM5P41594 1212 aa14.4□□□□□ -0.1
SDHA-215ENST00000512962 KIAA0753Q2KHM9 967 aa14.4□□□□□ -0.1
SDHA-215ENST00000512962 TRIM67Q6ZTA4 783 aa14.4□□□□□ -0.1
SDHA-215ENST00000512962 BMP8AQ7Z5Y6 402 aa14.4□□□□□ -0.1
SDHA-215ENST00000512962 C7orf31Q8N865 590 aa14.4□□□□□ -0.1
SDHA-215ENST00000512962 TAAR1Q96RJ0 339 aa14.4□□□□□ -0.1
SDHA-215ENST00000512962 TMEM47Q9BQJ4 181 aa14.4□□□□□ -0.1
SDHA-215ENST00000512962 NAPBQ9H115 298 aa14.4□□□□□ -0.1
SDHA-215ENST00000512962 CTNNA3Q9UI47 895 aa14.4□□□□□ -0.1
SDHA-215ENST00000512962 ZFHX2Q9C0A1 2572 aaPredicted RBP14.4□□□□□ -0.1
SDHA-215ENST00000512962 PRMT3O60678 531 aa14.39□□□□□ -0.11
SDHA-215ENST00000512962 RGS20O76081 388 aa14.39□□□□□ -0.11
SDHA-215ENST00000512962 CAMK1Q14012 370 aa14.39□□□□□ -0.11
SDHA-215ENST00000512962 USH1GQ495M9 461 aa14.39□□□□□ -0.11
SDHA-215ENST00000512962 DNERQ8NFT8 737 aa14.39□□□□□ -0.11
SDHA-215ENST00000512962 TOP1MTQ969P6 601 aa14.39□□□□□ -0.11
SDHA-215ENST00000512962 YME1L1Q96TA2 773 aa14.39□□□□□ -0.11
SDHA-215ENST00000512962 DDX41Q9UJV9 622 aaKnown RBP14.39□□□□□ -0.11
SDHA-215ENST00000512962 STXBP3O00186 592 aa14.38□□□□□ -0.11
SDHA-215ENST00000512962 SIAH2O43255 324 aa14.38□□□□□ -0.11
SDHA-215ENST00000512962 HMMRO75330 724 aa14.38□□□□□ -0.11
SDHA-215ENST00000512962 PDHBP11177 359 aa14.38□□□□□ -0.11
SDHA-215ENST00000512962 CASTP20810 708 aaKnown RBP14.38□□□□□ -0.11
SDHA-215ENST00000512962 THPOP40225 353 aa14.38□□□□□ -0.11
SDHA-215ENST00000512962 SMAD4Q13485 552 aaKnown RBP14.38□□□□□ -0.11
SDHA-215ENST00000512962 OCLNQ16625 522 aa14.38□□□□□ -0.11
SDHA-215ENST00000512962 VPS53Q5VIR6 699 aa14.38□□□□□ -0.11
SDHA-215ENST00000512962 SERINC5Q86VE9 423 aa14.38□□□□□ -0.11
SDHA-215ENST00000512962 SAMD11Q96NU1 681 aa14.38□□□□□ -0.11
SDHA-215ENST00000512962 UPF3BQ9BZI7 483 aaKnown RBP14.38□□□□□ -0.11
SDHA-215ENST00000512962 LRRCC1Q9C099 1032 aa14.38□□□□□ -0.11
SDHA-215ENST00000512962 TMPRSS4Q9NRS4 437 aa14.38□□□□□ -0.11
SDHA-215ENST00000512962 FAM50BQ9Y247 325 aa14.38□□□□□ -0.11
SDHA-215ENST00000512962 CACNA1HO95180 2353 aa14.37□□□□□ -0.11
SDHA-215ENST00000512962 RSPH10B2B2RC85 870 aa14.37□□□□□ -0.11
SDHA-215ENST00000512962 RANBP6O60518 1105 aaKnown RBP14.37□□□□□ -0.11
SDHA-215ENST00000512962 CTSHP09668 335 aa14.37□□□□□ -0.11
SDHA-215ENST00000512962 RSPH10BP0C881 870 aa14.37□□□□□ -0.11
SDHA-215ENST00000512962 CTNNB1P35222 781 aa14.37□□□□□ -0.11
SDHA-215ENST00000512962 SCNN1AP37088 669 aa14.37□□□□□ -0.11
SDHA-215ENST00000512962 DGKDQ16760 1214 aa14.37□□□□□ -0.11
SDHA-215ENST00000512962 ADGRD2Q7Z7M1 963 aa14.37□□□□□ -0.11
SDHA-215ENST00000512962 SYTL5Q8TDW5 730 aaPredicted RBP14.37□□□□□ -0.11
SDHA-215ENST00000512962 MSLNLQ96KJ4 702 aa14.37□□□□□ -0.11
SDHA-215ENST00000512962 PRIMPOLQ96LW4 560 aa14.37□□□□□ -0.11
SDHA-215ENST00000512962 IGFLR1Q9H665 355 aa14.37□□□□□ -0.11
SDHA-215ENST00000512962 RC3H2Q9HBD1 1191 aaKnown RBP14.37□□□□□ -0.11
SDHA-215ENST00000512962 WDR19Q8NEZ3 1342 aa14.37□□□□□ -0.11
SDHA-215ENST00000512962 PDGFBP01127 241 aaPredicted RBP14.36□□□□□ -0.11
SDHA-215ENST00000512962 GOLGA8HP0CJ92 632 aa14.36□□□□□ -0.11
SDHA-215ENST00000512962 HOXD8P13378 290 aaPredicted RBP14.36□□□□□ -0.11
SDHA-215ENST00000512962 DNAJB1P25685 340 aa14.36□□□□□ -0.11
SDHA-215ENST00000512962 ZXDAP98168 799 aa14.36□□□□□ -0.11
SDHA-215ENST00000512962 ZNF543Q08ER8 600 aa14.36□□□□□ -0.11
SDHA-215ENST00000512962 HSDL1Q3SXM5 330 aa14.36□□□□□ -0.11
SDHA-215ENST00000512962 ASCL5Q7RTU5 278 aa14.36□□□□□ -0.11
SDHA-215ENST00000512962 FBXL6Q8N531 539 aa14.36□□□□□ -0.11
SDHA-215ENST00000512962 ASIC4Q96FT7 647 aa14.36□□□□□ -0.11
SDHA-215ENST00000512962 IFIH1Q9BYX4 1025 aaKnown RBP14.36□□□□□ -0.11
SDHA-215ENST00000512962 BCAS3Q9H6U6 928 aa14.36□□□□□ -0.11
SDHA-215ENST00000512962 CYLDQ9NQC7 956 aa14.36□□□□□ -0.11
SDHA-215ENST00000512962 CLEC1BQ9P126 229 aa14.36□□□□□ -0.11
SDHA-215ENST00000512962 SUPT16HQ9Y5B9 1047 aaKnown RBP14.36□□□□□ -0.11
SDHA-215ENST00000512962 CACNA1AO00555 2505 aa14.36□□□□□ -0.11
SDHA-215ENST00000512962 LOC730098B7Z3J9 87 aa14.35□□□□□ -0.11
SDHA-215ENST00000512962 C5orf67F2Z3F1 127 aa14.35□□□□□ -0.11
SDHA-215ENST00000512962 ZFYP08048 801 aaPredicted RBP14.35□□□□□ -0.11
SDHA-215ENST00000512962 EIF2AK2P19525 551 aaKnown RBP14.35□□□□□ -0.11
SDHA-215ENST00000512962 HOXC8P31273 242 aa14.35□□□□□ -0.11
SDHA-215ENST00000512962 DHX9Q08211 1270 aaKnown RBP14.35□□□□□ -0.11
SDHA-215ENST00000512962 ZMYM1Q5SVZ6 1142 aa14.35□□□□□ -0.11
SDHA-215ENST00000512962 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.35□□□□□ -0.11
SDHA-215ENST00000512962 C1orf216Q8TAB5 229 aa14.35□□□□□ -0.11
SDHA-215ENST00000512962 OTUD7AQ8TE49 926 aaPredicted RBP14.35□□□□□ -0.11
SDHA-215ENST00000512962 POP1Q99575 1024 aaKnown RBP14.35□□□□□ -0.11
SDHA-215ENST00000512962 C16orf70Q9BSU1 422 aa14.35□□□□□ -0.11
SDHA-215ENST00000512962 NACAP1Q9BZK3 213 aa14.35□□□□□ -0.11
SDHA-215ENST00000512962 OSBPL3Q9H4L5 887 aa14.35□□□□□ -0.11
SDHA-215ENST00000512962 CD207Q9UJ71 328 aa14.35□□□□□ -0.11
SDHA-215ENST00000512962 PCDHGC5Q9Y5F6 944 aa14.35□□□□□ -0.11
SDHA-215ENST00000512962 VPS13AQ96RL7 3174 aa14.35□□□□□ -0.11
SDHA-215ENST00000512962 EMSYQ7Z589 1322 aa14.35□□□□□ -0.11
SDHA-215ENST00000512962 TREHO43280 583 aa14.34□□□□□ -0.11
SDHA-215ENST00000512962 ORC4O43929 436 aa14.34□□□□□ -0.11
SDHA-215ENST00000512962 GLP2RO95838 553 aa14.34□□□□□ -0.11
SDHA-215ENST00000512962 ADH1CP00326 375 aa14.34□□□□□ -0.11
SDHA-215ENST00000512962 SLC3A2P08195 630 aaKnown RBP14.34□□□□□ -0.11
SDHA-215ENST00000512962 FGRP09769 529 aa14.34□□□□□ -0.11
SDHA-215ENST00000512962 SNHG28P0DPA3 235 aa14.34□□□□□ -0.11
SDHA-215ENST00000512962 TOP1P11387 765 aaKnown RBP14.34□□□□□ -0.11
SDHA-215ENST00000512962 RBM10P98175 930 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms