RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 IKBKEQ14164 716 aa8.18□□□□□ -1.1
RFC1-215ENST00000512881 TMEM132BQ14DG7 1078 aa8.18□□□□□ -1.1
RFC1-215ENST00000512881 ANKRD45Q5TZF3 282 aa8.18□□□□□ -1.1
RFC1-215ENST00000512881 ANKRD34AQ69YU3 496 aa8.18□□□□□ -1.1
RFC1-215ENST00000512881 GALNT12Q8IXK2 581 aa8.18□□□□□ -1.1
RFC1-215ENST00000512881 C7orf61Q8IZ16 206 aa8.18□□□□□ -1.1
RFC1-215ENST00000512881 IFNL3Q8IZI9 196 aa8.18□□□□□ -1.1
RFC1-215ENST00000512881 ZNF444Q8N0Y2 327 aaPredicted RBP8.18□□□□□ -1.1
RFC1-215ENST00000512881 TRPV1Q8NER1 839 aa8.18□□□□□ -1.1
RFC1-215ENST00000512881 ASAP3Q8TDY4 903 aa8.18□□□□□ -1.1
RFC1-215ENST00000512881 CRBNQ96SW2 442 aa8.18□□□□□ -1.1
RFC1-215ENST00000512881 SEC62Q99442 399 aaKnown RBP8.18□□□□□ -1.1
RFC1-215ENST00000512881 RUSC1Q9BVN2 902 aa8.18□□□□□ -1.1
RFC1-215ENST00000512881 EPB41L4AQ9HCS5 686 aaPredicted RBP8.18□□□□□ -1.1
RFC1-215ENST00000512881 FBXO28Q9NVF7 368 aa8.18□□□□□ -1.1
RFC1-215ENST00000512881 NYAP2Q9P242 653 aa8.18□□□□□ -1.1
RFC1-215ENST00000512881 STAP2Q9UGK3 403 aa8.18□□□□□ -1.1
RFC1-215ENST00000512881 ADAMTS5Q9UNA0 930 aa8.18□□□□□ -1.1
RFC1-215ENST00000512881 F5H6K3 240 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 VWA5AO00534 786 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 PRDM1O75626 825 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 SLC25A27O95847 323 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 IGLV1-40P01703 118 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 ESRRAP11474 423 aaPredicted RBP8.17□□□□□ -1.1
RFC1-215ENST00000512881 COL6A1P12109 1028 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 FCER1AP12319 257 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 MX1P20591 662 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 STAT3P40763 770 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 KLRC3Q07444 240 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 FAM83BQ5T0W9 1011 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 OLFML2BQ68BL8 750 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 ABRAQ8N0Z2 381 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 FAM129BQ96TA1 746 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 NUP88Q99567 741 aaPredicted RBP8.17□□□□□ -1.1
RFC1-215ENST00000512881 FSD1Q9BTV5 496 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 NACAP1Q9BZK3 213 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 SOX17Q9H6I2 414 aaPredicted RBP8.17□□□□□ -1.1
RFC1-215ENST00000512881 C7orf69Q9H7B7 122 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 ZNF287Q9HBT7 754 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 SLC5A4Q9NY91 659 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 STOML1Q9UBI4 398 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 CLIP2Q9UDT6 1046 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 DDX20Q9UHI6 824 aaKnown RBP8.17□□□□□ -1.1
RFC1-215ENST00000512881 BRPF3Q9ULD4 1205 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 PPP1R9AQ9ULJ8 1098 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 ZMYND8Q9ULU4 1186 aaPredicted RBP8.17□□□□□ -1.1
RFC1-215ENST00000512881 PFASO15067 1338 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 FOCADQ5VW36 1801 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 DOCK3Q8IZD9 2030 aa8.17□□□□□ -1.1
RFC1-215ENST00000512881 IGKV6D-41A0A0C4DH26 115 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 LOC100289279A0A1B0GTE1 492 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 A0A1W2PP55 124 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 GSC2O15499 205 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 MGAMO43451 1857 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 MSCO60682 206 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 NDUFB10O96000 172 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 MYH1P12882 1939 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 CYBAP13498 195 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 ARL4DP49703 201 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 HDAC1Q13547 482 aaPredicted RBP8.16□□□□□ -1.1
RFC1-215ENST00000512881 LAMA3Q16787 3333 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 PRAMEF19Q5SWL8 479 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 RIOX2Q8IUF8 465 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 FAM20CQ8IXL6 584 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 REPS2Q8NFH8 660 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 MKL1Q969V6 931 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 ATAD5Q96QE3 1844 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 CDK5RAP2Q96SN8 1893 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 TCF12Q99081 682 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 MMP19Q99542 508 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 KRTAP4-8Q9BYQ9 185 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 NRSN2Q9GZP1 204 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 SENP6Q9GZR1 1112 aaPredicted RBP8.16□□□□□ -1.1
RFC1-215ENST00000512881 MTMR4Q9NYA4 1195 aa8.16□□□□□ -1.1
RFC1-215ENST00000512881 A0A0C4DFX4 3053 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 ROBO3Q96MS0 1386 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 SALL3Q9BXA9 1300 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 A0A1W2PPC1 479 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 PGK2P07205 417 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 SLC3A2P08195 630 aaKnown RBP8.15□□□□□ -1.1
RFC1-215ENST00000512881 SYN1P17600 705 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 BMP8BP34820 402 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 COPB2P35606 906 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 TFAP4Q01664 338 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 PDE4BQ07343 736 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 KCTD2Q14681 263 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 LRRC26Q2I0M4 334 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 FAM47AQ5JRC9 791 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 CCNJLQ8IV13 435 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 TRIM42Q8IWZ5 723 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 PRPF38AQ8NAV1 312 aaKnown RBP8.15□□□□□ -1.1
RFC1-215ENST00000512881 ARRDC4Q8NCT1 418 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 CEP95Q96GE4 821 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 MAML3Q96JK9 1138 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 YTHDC1Q96MU7 727 aaKnown RBP8.15□□□□□ -1.1
RFC1-215ENST00000512881 GDF15Q99988 308 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 SLF1Q9BQI6 1058 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 USP26Q9BXU7 913 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 NAPBQ9H115 298 aa8.15□□□□□ -1.1
RFC1-215ENST00000512881 ZNF214Q9UL59 606 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms