RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 STK24Q9Y6E0 443 aa13.68□□□□□ -0.22
CDK7-208ENST00000512687 CUL9Q8IWT3 2517 aa13.68□□□□□ -0.22
CDK7-208ENST00000512687 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.67□□□□□ -0.22
CDK7-208ENST00000512687 EFCAB14O75071 495 aa13.67□□□□□ -0.22
CDK7-208ENST00000512687 GNA11P29992 359 aa13.67□□□□□ -0.22
CDK7-208ENST00000512687 SSRP1Q08945 709 aaKnown RBP13.67□□□□□ -0.22
CDK7-208ENST00000512687 NPY5RQ15761 445 aa13.67□□□□□ -0.22
CDK7-208ENST00000512687 CCDC85BQ15834 202 aaPredicted RBP13.67□□□□□ -0.22
CDK7-208ENST00000512687 ABHD15Q6UXT9 468 aa13.67□□□□□ -0.22
CDK7-208ENST00000512687 ARNTL2Q8WYA1 636 aa13.67□□□□□ -0.22
CDK7-208ENST00000512687 COL25A1Q9BXS0 654 aaPredicted RBP13.67□□□□□ -0.22
CDK7-208ENST00000512687 TRPC6Q9Y210 931 aa13.67□□□□□ -0.22
CDK7-208ENST00000512687 PCDHB13Q9Y5F0 798 aa13.67□□□□□ -0.22
CDK7-208ENST00000512687 BRWD1Q9NSI6 2320 aa13.67□□□□□ -0.22
CDK7-208ENST00000512687 PLXNA4Q9HCM2 1894 aa13.66□□□□□ -0.22
CDK7-208ENST00000512687 KIF28PB7ZC32 967 aa13.66□□□□□ -0.22
CDK7-208ENST00000512687 IPO5O00410 1097 aaKnown RBP13.66□□□□□ -0.22
CDK7-208ENST00000512687 GHRP10912 638 aa13.66□□□□□ -0.22
CDK7-208ENST00000512687 ATP4AP20648 1035 aa13.66□□□□□ -0.22
CDK7-208ENST00000512687 CIITAP33076 1130 aa13.66□□□□□ -0.22
CDK7-208ENST00000512687 STAT5BP51692 787 aa13.66□□□□□ -0.22
CDK7-208ENST00000512687 SCRN1Q12765 414 aa13.66□□□□□ -0.22
CDK7-208ENST00000512687 LPIN1Q14693 890 aa13.66□□□□□ -0.22
CDK7-208ENST00000512687 PRR16Q569H4 304 aa13.66□□□□□ -0.22
CDK7-208ENST00000512687 MCTP2Q6DN12 878 aa13.66□□□□□ -0.22
CDK7-208ENST00000512687 TAF2Q6P1X5 1199 aa13.66□□□□□ -0.22
CDK7-208ENST00000512687 PLPPR4Q7Z2D5 763 aa13.66□□□□□ -0.22
CDK7-208ENST00000512687 MYOCDQ8IZQ8 938 aa13.66□□□□□ -0.22
CDK7-208ENST00000512687 SEPT8Q92599 483 aa13.66□□□□□ -0.22
CDK7-208ENST00000512687 ZNF577Q9BSK1 485 aa13.66□□□□□ -0.22
CDK7-208ENST00000512687 ZBED2Q9BTP6 218 aa13.66□□□□□ -0.22
CDK7-208ENST00000512687 IFIH1Q9BYX4 1025 aaKnown RBP13.66□□□□□ -0.22
CDK7-208ENST00000512687 AZI2Q9H6S1 392 aa13.66□□□□□ -0.22
CDK7-208ENST00000512687 SH3GLB2Q9NR46 395 aa13.66□□□□□ -0.22
CDK7-208ENST00000512687 CDY2AQ9Y6F7 541 aa13.66□□□□□ -0.22
CDK7-208ENST00000512687 XIRP2A4UGR9 3374 aa13.65□□□□□ -0.22
CDK7-208ENST00000512687 POTEB3A0JP26 581 aa13.65□□□□□ -0.22
CDK7-208ENST00000512687 LINC01553A4QN01 128 aa13.65□□□□□ -0.22
CDK7-208ENST00000512687 RRN3P2A6NIE6 340 aa13.65□□□□□ -0.22
CDK7-208ENST00000512687 M0R2N6 131 aa13.65□□□□□ -0.22
CDK7-208ENST00000512687 LPXNO60711 386 aa13.65□□□□□ -0.22
CDK7-208ENST00000512687 NLRP5P59047 1200 aa13.65□□□□□ -0.22
CDK7-208ENST00000512687 MRPS6P82932 125 aaKnown RBP13.65□□□□□ -0.22
CDK7-208ENST00000512687 SETQ01105 290 aaPredicted RBP13.65□□□□□ -0.22
CDK7-208ENST00000512687 POTEBQ6S5H4 581 aa13.65□□□□□ -0.22
CDK7-208ENST00000512687 TRIM22Q8IYM9 498 aa13.65□□□□□ -0.22
CDK7-208ENST00000512687 MICALL1Q8N3F8 863 aa13.65□□□□□ -0.22
CDK7-208ENST00000512687 BICD2Q8TD16 824 aa13.65□□□□□ -0.22
CDK7-208ENST00000512687 GDPD5Q8WTR4 605 aa13.65□□□□□ -0.22
CDK7-208ENST00000512687 RAD9AQ99638 391 aa13.65□□□□□ -0.22
CDK7-208ENST00000512687 FAM49AQ9H0Q0 323 aaPredicted RBP13.65□□□□□ -0.22
CDK7-208ENST00000512687 TPCN1Q9ULQ1 816 aa13.65□□□□□ -0.22
CDK7-208ENST00000512687 MTCH2Q9Y6C9 303 aa13.65□□□□□ -0.22
CDK7-208ENST00000512687 ZBTB42B2RXF5 422 aa13.64□□□□□ -0.23
CDK7-208ENST00000512687 CPLX1O14810 134 aa13.64□□□□□ -0.23
CDK7-208ENST00000512687 BACH1O14867 736 aa13.64□□□□□ -0.23
CDK7-208ENST00000512687 DEXIO95424 95 aa13.64□□□□□ -0.23
CDK7-208ENST00000512687 LARGE1O95461 756 aa13.64□□□□□ -0.23
CDK7-208ENST00000512687 SEC24BO95487 1268 aa13.64□□□□□ -0.23
CDK7-208ENST00000512687 AMHP03971 560 aa13.64□□□□□ -0.23
CDK7-208ENST00000512687 HTRA4P83105 476 aaPredicted RBP13.64□□□□□ -0.23
CDK7-208ENST00000512687 TMEM62Q0P6H9 643 aa13.64□□□□□ -0.23
CDK7-208ENST00000512687 GRB10Q13322 594 aa13.64□□□□□ -0.23
CDK7-208ENST00000512687 FBXO47Q5MNV8 452 aa13.64□□□□□ -0.23
CDK7-208ENST00000512687 DAGLBQ8NCG7 672 aa13.64□□□□□ -0.23
CDK7-208ENST00000512687 SP7Q8TDD2 431 aaPredicted RBP13.64□□□□□ -0.23
CDK7-208ENST00000512687 LINC01599Q8WXQ3 324 aa13.64□□□□□ -0.23
CDK7-208ENST00000512687 GJA10Q969M2 543 aa13.64□□□□□ -0.23
CDK7-208ENST00000512687 IL17RAQ96F46 866 aa13.64□□□□□ -0.23
CDK7-208ENST00000512687 KIF12Q96FN5 646 aa13.64□□□□□ -0.23
CDK7-208ENST00000512687 AGO3Q9H9G7 860 aaKnown RBP13.64□□□□□ -0.23
CDK7-208ENST00000512687 ZNF302Q9NR11 478 aa13.64□□□□□ -0.23
CDK7-208ENST00000512687 MTUS1Q9ULD2 1270 aa13.64□□□□□ -0.23
CDK7-208ENST00000512687 PCDHA4Q9UN74 947 aa13.64□□□□□ -0.23
CDK7-208ENST00000512687 IGSF9BQ9UPX0 1349 aa13.64□□□□□ -0.23
CDK7-208ENST00000512687 MSH4O15457 936 aa13.63□□□□□ -0.23
CDK7-208ENST00000512687 PFKFB2O60825 505 aa13.63□□□□□ -0.23
CDK7-208ENST00000512687 UPP2O95045 317 aa13.63□□□□□ -0.23
CDK7-208ENST00000512687 CTDNEP1O95476 244 aa13.63□□□□□ -0.23
CDK7-208ENST00000512687 POU3F3P20264 500 aaPredicted RBP13.63□□□□□ -0.23
CDK7-208ENST00000512687 AK2P54819 239 aa13.63□□□□□ -0.23
CDK7-208ENST00000512687 ANAPC15P60006 121 aa13.63□□□□□ -0.23
CDK7-208ENST00000512687 ERVK-21P61565 698 aa13.63□□□□□ -0.23
CDK7-208ENST00000512687 FAM160B1Q5W0V3 765 aa13.63□□□□□ -0.23
CDK7-208ENST00000512687 ZNF746Q6NUN9 644 aaPredicted RBP13.63□□□□□ -0.23
CDK7-208ENST00000512687 SWSAP1Q6NVH7 229 aa13.63□□□□□ -0.23
CDK7-208ENST00000512687 MIS18BP1Q6P0N0 1132 aa13.63□□□□□ -0.23
CDK7-208ENST00000512687 PDXDC2PQ6P474 469 aa13.63□□□□□ -0.23
CDK7-208ENST00000512687 MTHFD1LQ6UB35 978 aa13.63□□□□□ -0.23
CDK7-208ENST00000512687 RSPH3Q86UC2 560 aa13.63□□□□□ -0.23
CDK7-208ENST00000512687 BLIDQ8IZY5 108 aa13.63□□□□□ -0.23
CDK7-208ENST00000512687 TBCKQ8TEA7 893 aa13.63□□□□□ -0.23
CDK7-208ENST00000512687 ATP8B4Q8TF62 1192 aa13.63□□□□□ -0.23
CDK7-208ENST00000512687 APBB2Q92870 758 aa13.63□□□□□ -0.23
CDK7-208ENST00000512687 TOP1MTQ969P6 601 aa13.63□□□□□ -0.23
CDK7-208ENST00000512687 C17orf80Q9BSJ5 609 aa13.63□□□□□ -0.23
CDK7-208ENST00000512687 GJB4Q9NTQ9 266 aa13.63□□□□□ -0.23
CDK7-208ENST00000512687 TBC1D22BQ9NU19 505 aa13.63□□□□□ -0.23
CDK7-208ENST00000512687 RYDENQ9NUL5 291 aaKnown RBP13.63□□□□□ -0.23
CDK7-208ENST00000512687 PCDHB8Q9UN66 801 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms