RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 MYO19Q96H55 970 aa10.84□□□□□ -0.67
SNF8-211ENST00000512243 LLPHQ9BRT6 129 aaKnown RBP10.84□□□□□ -0.67
SNF8-211ENST00000512243 AMNQ9BXJ7 453 aa10.84□□□□□ -0.67
SNF8-211ENST00000512243 MOV10L1Q9BXT6 1211 aaKnown RBP10.84□□□□□ -0.67
SNF8-211ENST00000512243 HOMER2Q9NSB8 354 aa10.84□□□□□ -0.67
SNF8-211ENST00000512243 RNF146Q9NTX7 359 aa10.84□□□□□ -0.67
SNF8-211ENST00000512243 ORC3Q9UBD5 711 aaPredicted RBP10.84□□□□□ -0.67
SNF8-211ENST00000512243 LRFN2Q9ULH4 789 aa10.84□□□□□ -0.67
SNF8-211ENST00000512243 ZNF536O15090 1300 aa10.84□□□□□ -0.67
SNF8-211ENST00000512243 JAK2O60674 1132 aa10.83□□□□□ -0.68
SNF8-211ENST00000512243 FKTNO75072 461 aa10.83□□□□□ -0.68
SNF8-211ENST00000512243 DEXIO95424 95 aa10.83□□□□□ -0.68
SNF8-211ENST00000512243 CTDNEP1O95476 244 aa10.83□□□□□ -0.68
SNF8-211ENST00000512243 HSPA1AP0DMV8 641 aaKnown RBP10.83□□□□□ -0.68
SNF8-211ENST00000512243 HSPA1BP0DMV9 641 aaKnown RBP10.83□□□□□ -0.68
SNF8-211ENST00000512243 SCG2P13521 617 aa10.83□□□□□ -0.68
SNF8-211ENST00000512243 TAL1P17542 331 aaPredicted RBP10.83□□□□□ -0.68
SNF8-211ENST00000512243 ERCC3P19447 782 aa10.83□□□□□ -0.68
SNF8-211ENST00000512243 MAPK4P31152 587 aa10.83□□□□□ -0.68
SNF8-211ENST00000512243 ANP32AP39687 249 aaKnown RBP10.83□□□□□ -0.68
SNF8-211ENST00000512243 HMGN5P82970 282 aaKnown RBP10.83□□□□□ -0.68
SNF8-211ENST00000512243 SP3Q02447 781 aa10.83□□□□□ -0.68
SNF8-211ENST00000512243 CCINQ13939 588 aa10.83□□□□□ -0.68
SNF8-211ENST00000512243 ELOAQ14241 798 aaKnown RBP10.83□□□□□ -0.68
SNF8-211ENST00000512243 PFKFB3Q16875 520 aaPredicted RBP10.83□□□□□ -0.68
SNF8-211ENST00000512243 NOM1Q5C9Z4 860 aaKnown RBP10.83□□□□□ -0.68
SNF8-211ENST00000512243 MICALL1Q8N3F8 863 aa10.83□□□□□ -0.68
SNF8-211ENST00000512243 CHST13Q8NET6 341 aa10.83□□□□□ -0.68
SNF8-211ENST00000512243 WASF1Q92558 559 aa10.83□□□□□ -0.68
SNF8-211ENST00000512243 ACAD9Q9H845 621 aa10.83□□□□□ -0.68
SNF8-211ENST00000512243 FBXO40Q9UH90 709 aa10.83□□□□□ -0.68
SNF8-211ENST00000512243 MRPL11Q9Y3B7 192 aaKnown RBP10.83□□□□□ -0.68
SNF8-211ENST00000512243 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.83□□□□□ -0.68
SNF8-211ENST00000512243 MCM3APO60318 1980 aa10.83□□□□□ -0.68
SNF8-211ENST00000512243 PPP1R11O60927 126 aaPredicted RBP10.82□□□□□ -0.68
SNF8-211ENST00000512243 MICAL2O94851 1124 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 HSP90AA1P07900 732 aaKnown RBP10.82□□□□□ -0.68
SNF8-211ENST00000512243 EPB42P16452 691 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 CHRNA4P43681 627 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 NAPAP54920 295 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 FCGRTP55899 365 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 CUL4AQ13619 759 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 OCLNQ16625 522 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 C11orf91Q3C1V1 193 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 TMEM164Q5U3C3 297 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 WWC2Q6AWC2 1192 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 KRT25Q7Z3Z0 450 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 FAM184AQ8NB25 1140 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 CCDC148Q8NFR7 591 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 CCDC12Q8WUD4 166 aaPredicted RBP10.82□□□□□ -0.68
SNF8-211ENST00000512243 COA7Q96BR5 231 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 DDX11Q96FC9 970 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 ERO1AQ96HE7 468 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 MKNK1Q9BUB5 465 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 PORCNQ9H237 461 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 MROH8Q9H579 483 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 EFCC1Q9HA90 598 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 SMC3Q9UQE7 1217 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 USP20Q9Y2K6 914 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 KIF3AQ9Y496 699 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 PCDHA1Q9Y5I3 950 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.82□□□□□ -0.68
SNF8-211ENST00000512243 IVNS1ABPQ9Y6Y0 642 aa10.82□□□□□ -0.68
SNF8-211ENST00000512243 C1QTNF9BB2RNN3 333 aa10.81□□□□□ -0.68
SNF8-211ENST00000512243 STXBP3O00186 592 aa10.81□□□□□ -0.68
SNF8-211ENST00000512243 ATG7O95352 703 aa10.81□□□□□ -0.68
SNF8-211ENST00000512243 XBP1P17861 261 aa10.81□□□□□ -0.68
SNF8-211ENST00000512243 CTCFP49711 727 aaPredicted RBP10.81□□□□□ -0.68
SNF8-211ENST00000512243 ARSDP51689 593 aa10.81□□□□□ -0.68
SNF8-211ENST00000512243 LACTBP83111 547 aaPredicted RBP10.81□□□□□ -0.68
SNF8-211ENST00000512243 ARHGEF6Q15052 776 aa10.81□□□□□ -0.68
SNF8-211ENST00000512243 PKN1Q16512 942 aa10.81□□□□□ -0.68
SNF8-211ENST00000512243 GPR142Q7Z601 462 aa10.81□□□□□ -0.68
SNF8-211ENST00000512243 PLEKHH3Q7Z736 793 aa10.81□□□□□ -0.68
SNF8-211ENST00000512243 CD163Q86VB7 1156 aa10.81□□□□□ -0.68
SNF8-211ENST00000512243 SMARCC2Q8TAQ2 1214 aa10.81□□□□□ -0.68
SNF8-211ENST00000512243 CD99L2Q8TCZ2 262 aa10.81□□□□□ -0.68
SNF8-211ENST00000512243 ZNF296Q8WUU4 475 aaPredicted RBP10.81□□□□□ -0.68
SNF8-211ENST00000512243 IFT43Q96FT9 208 aa10.81□□□□□ -0.68
SNF8-211ENST00000512243 MMP19Q99542 508 aa10.81□□□□□ -0.68
SNF8-211ENST00000512243 BARHL2Q9NY43 387 aa10.81□□□□□ -0.68
SNF8-211ENST00000512243 SLC6A14Q9UN76 642 aa10.81□□□□□ -0.68
SNF8-211ENST00000512243 RIPK3Q9Y572 518 aa10.81□□□□□ -0.68
SNF8-211ENST00000512243 PFASO15067 1338 aa10.81□□□□□ -0.68
SNF8-211ENST00000512243 MYH7BA7E2Y1 1941 aa10.8□□□□□ -0.68
SNF8-211ENST00000512243 FAM229AH3BQW9 127 aa10.8□□□□□ -0.68
SNF8-211ENST00000512243 NFIBO00712 420 aa10.8□□□□□ -0.68
SNF8-211ENST00000512243 TNPO2O14787 897 aaKnown RBP10.8□□□□□ -0.68
SNF8-211ENST00000512243 FOXN1O15353 648 aa10.8□□□□□ -0.68
SNF8-211ENST00000512243 DTNBO60941 627 aa10.8□□□□□ -0.68
SNF8-211ENST00000512243 HSPA8P11142 646 aaKnown RBP10.8□□□□□ -0.68
SNF8-211ENST00000512243 FCER1AP12319 257 aa10.8□□□□□ -0.68
SNF8-211ENST00000512243 PSMC4P43686 418 aa10.8□□□□□ -0.68
SNF8-211ENST00000512243 TRIM29Q14134 588 aa10.8□□□□□ -0.68
SNF8-211ENST00000512243 MUM1L1Q5H9M0 696 aa10.8□□□□□ -0.68
SNF8-211ENST00000512243 COX20Q5RI15 118 aa10.8□□□□□ -0.68
SNF8-211ENST00000512243 NSMFQ6X4W1 530 aa10.8□□□□□ -0.68
SNF8-211ENST00000512243 MCF2L2Q86YR7 1114 aa10.8□□□□□ -0.68
SNF8-211ENST00000512243 SOCS4Q8WXH5 440 aa10.8□□□□□ -0.68
SNF8-211ENST00000512243 CUL5Q93034 780 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms