RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 TSPY26PQ9H489 355 aa8.98□□□□□ -0.97
SMAD1-209ENST00000511125 SRRDQ9UH36 339 aa8.98□□□□□ -0.97
SMAD1-209ENST00000511125 LCTP09848 1927 aa8.98□□□□□ -0.97
SMAD1-209ENST00000511125 RPN1P04843 607 aaKnown RBP8.98□□□□□ -0.97
SMAD1-209ENST00000511125 TMEM62Q0P6H9 643 aa8.98□□□□□ -0.97
SMAD1-209ENST00000511125 ARSHQ5FYA8 562 aa8.98□□□□□ -0.97
SMAD1-209ENST00000511125 GNASQ5JWF2 1037 aa8.98□□□□□ -0.97
SMAD1-209ENST00000511125 METTL7BQ6UX53 244 aa8.98□□□□□ -0.97
SMAD1-209ENST00000511125 TLK2Q86UE8 772 aa8.98□□□□□ -0.97
SMAD1-209ENST00000511125 SAMD3Q8N6K7 520 aa8.98□□□□□ -0.97
SMAD1-209ENST00000511125 SEPT1Q8WYJ6 367 aa8.98□□□□□ -0.97
SMAD1-209ENST00000511125 PCYT2Q99447 389 aa8.98□□□□□ -0.97
SMAD1-209ENST00000511125 GPR20Q99678 358 aa8.98□□□□□ -0.97
SMAD1-209ENST00000511125 ZSWIM4Q9H7M6 989 aa8.98□□□□□ -0.97
SMAD1-209ENST00000511125 ZCCHC17Q9NP64 241 aaKnown RBP8.98□□□□□ -0.97
SMAD1-209ENST00000511125 SYNGAP1Q96PV0 1343 aa8.98□□□□□ -0.97
SMAD1-209ENST00000511125 SUPT20HL2P0C7V6 817 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 ZNF865P0CJ78 1059 aaPredicted RBP8.97□□□□□ -0.97
SMAD1-209ENST00000511125 CCDC192P0DO97 292 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 MAP2K1Q02750 393 aaPredicted RBP8.97□□□□□ -0.97
SMAD1-209ENST00000511125 ARHGAP1Q07960 439 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 MFSD14CQ5VZR4 134 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 XRRA1Q6P2D8 792 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 LRSAM1Q6UWE0 723 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 MAMDC4Q6UXC1 1216 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 ABHD15Q6UXT9 468 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 SOCS4Q8WXH5 440 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 REEP2Q9BRK0 252 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 TRIM9Q9C026 710 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 KATNBL1Q9H079 304 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 PLXNB2O15031 1838 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 GH1P01241 217 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 CYP11B2P19099 503 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 PSMC5P62195 406 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 DPYDQ12882 1025 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 STK4Q13043 487 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 ORC2Q13416 577 aaPredicted RBP8.97□□□□□ -0.97
SMAD1-209ENST00000511125 FAM47CQ5HY64 1035 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 PADI6Q6TGC4 694 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 NIPA1Q7RTP0 329 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 MYCT1Q8N699 235 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 USP6NLQ92738 828 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 NT5C3AQ9H0P0 336 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 MAFGO15525 162 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 CD44P16070 742 aaKnown RBP8.97□□□□□ -0.97
SMAD1-209ENST00000511125 ZNF200P98182 395 aaPredicted RBP8.97□□□□□ -0.97
SMAD1-209ENST00000511125 DRP2Q13474 957 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 MTFR1Q15390 333 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 TMEM119Q4V9L6 283 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 ZNF746Q6NUN9 644 aaPredicted RBP8.97□□□□□ -0.97
SMAD1-209ENST00000511125 RINT1Q6NUQ1 792 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 CXCL17Q6UXB2 119 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 AOPEPQ8N6M6 819 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 DNAJC5GQ8N7S2 189 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 NACC1Q96RE7 527 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 PANK4Q9NVE7 773 aa8.97□□□□□ -0.97
SMAD1-209ENST00000511125 HOOK1Q9UJC3 728 aaKnown RBP8.97□□□□□ -0.97
SMAD1-209ENST00000511125 A0A0G2JMZ2 1700 aa8.96□□□□□ -0.97
SMAD1-209ENST00000511125 TRIM49BA6NDI0 452 aa8.96□□□□□ -0.97
SMAD1-209ENST00000511125 CCDC169A6NNP5 214 aa8.96□□□□□ -0.97
SMAD1-209ENST00000511125 NMT1P30419 496 aaKnown RBP8.96□□□□□ -0.97
SMAD1-209ENST00000511125 ZNF165P49910 485 aa8.96□□□□□ -0.97
SMAD1-209ENST00000511125 JAK3P52333 1124 aa8.96□□□□□ -0.97
SMAD1-209ENST00000511125 ZC2HC1CQ53FD0 456 aaPredicted RBP8.96□□□□□ -0.97
SMAD1-209ENST00000511125 B3GNT9Q6UX72 402 aa8.96□□□□□ -0.97
SMAD1-209ENST00000511125 AP5M1Q9H0R1 490 aa8.96□□□□□ -0.97
SMAD1-209ENST00000511125 VTA1Q9NP79 307 aa8.96□□□□□ -0.97
SMAD1-209ENST00000511125 EXOC1Q9NV70 894 aa8.96□□□□□ -0.97
SMAD1-209ENST00000511125 KBTBD4Q9NVX7 518 aa8.96□□□□□ -0.97
SMAD1-209ENST00000511125 GOLGA6L3A6NEY3 463 aa8.96□□□□□ -0.98
SMAD1-209ENST00000511125 GTPBP6O43824 516 aaPredicted RBP8.96□□□□□ -0.98
SMAD1-209ENST00000511125 STAM2O75886 525 aa8.96□□□□□ -0.98
SMAD1-209ENST00000511125 SMC2O95347 1197 aa8.96□□□□□ -0.98
SMAD1-209ENST00000511125 INHAP05111 366 aa8.96□□□□□ -0.98
SMAD1-209ENST00000511125 TGFB3P10600 412 aa8.96□□□□□ -0.98
SMAD1-209ENST00000511125 ICAM3P32942 547 aa8.96□□□□□ -0.98
SMAD1-209ENST00000511125 SLC12A3P55017 1021 aa8.96□□□□□ -0.98
SMAD1-209ENST00000511125 KCNA1Q09470 495 aa8.96□□□□□ -0.98
SMAD1-209ENST00000511125 DUSP28Q4G0W2 176 aa8.96□□□□□ -0.98
SMAD1-209ENST00000511125 SFR1Q86XK3 245 aa8.96□□□□□ -0.98
SMAD1-209ENST00000511125 SENP7Q9BQF6 1050 aa8.96□□□□□ -0.98
SMAD1-209ENST00000511125 POLR3CQ9BUI4 534 aaPredicted RBP8.96□□□□□ -0.98
SMAD1-209ENST00000511125 FAM49AQ9H0Q0 323 aaPredicted RBP8.96□□□□□ -0.98
SMAD1-209ENST00000511125 SETD4Q9NVD3 440 aa8.96□□□□□ -0.98
SMAD1-209ENST00000511125 WBP1LQ9NX94 342 aa8.96□□□□□ -0.98
SMAD1-209ENST00000511125 FAM184BQ9ULE4 1060 aa8.96□□□□□ -0.98
SMAD1-209ENST00000511125 KDM3AQ9Y4C1 1321 aa8.96□□□□□ -0.98
SMAD1-209ENST00000511125 FAM237AA0A1B0GTK4 181 aa8.95□□□□□ -0.98
SMAD1-209ENST00000511125 HIP1RO75146 1068 aa8.95□□□□□ -0.98
SMAD1-209ENST00000511125 FAM13AO94988 1023 aa8.95□□□□□ -0.98
SMAD1-209ENST00000511125 LGALS2P05162 132 aa8.95□□□□□ -0.98
SMAD1-209ENST00000511125 HOXD10P28358 340 aa8.95□□□□□ -0.98
SMAD1-209ENST00000511125 RARRES1P49788 294 aa8.95□□□□□ -0.98
SMAD1-209ENST00000511125 ATP6V0A1Q93050 837 aa8.95□□□□□ -0.98
SMAD1-209ENST00000511125 CCDC34Q96HJ3 373 aa8.95□□□□□ -0.98
SMAD1-209ENST00000511125 CTNND2Q9UQB3 1225 aa8.95□□□□□ -0.98
SMAD1-209ENST00000511125 BECN2A8MW95 431 aa8.95□□□□□ -0.98
SMAD1-209ENST00000511125 CTAGE5O15320 804 aa8.95□□□□□ -0.98
SMAD1-209ENST00000511125 TBCAO75347 108 aaKnown RBP8.95□□□□□ -0.98
SMAD1-209ENST00000511125 PRPF6O94906 941 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms