RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 RFC2P35250 354 aa17.54■□□□□ 0.4
SH3TC1-220ENST00000511002 RABGGTBP53611 331 aa17.54■□□□□ 0.4
SH3TC1-220ENST00000511002 CCDC155Q8N6L0 562 aa17.54■□□□□ 0.4
SH3TC1-220ENST00000511002 FTOQ9C0B1 505 aaKnown RBP eCLIP17.54■□□□□ 0.4
SH3TC1-220ENST00000511002 TMEM60Q9H2L4 133 aa17.54■□□□□ 0.4
SH3TC1-220ENST00000511002 YBX2Q9Y2T7 364 aaKnown RBP17.54■□□□□ 0.4
SH3TC1-220ENST00000511002 MYO9BQ13459 2157 aa17.54■□□□□ 0.4
SH3TC1-220ENST00000511002 SIP14410 1827 aa17.54■□□□□ 0.4
SH3TC1-220ENST00000511002 EMSYQ7Z589 1322 aa17.53■□□□□ 0.4
SH3TC1-220ENST00000511002 MYOGP15173 224 aa17.53■□□□□ 0.4
SH3TC1-220ENST00000511002 DDIT3P35638 169 aa17.53■□□□□ 0.4
SH3TC1-220ENST00000511002 THPOP40225 353 aa17.53■□□□□ 0.4
SH3TC1-220ENST00000511002 RILPL1Q5EBL4 403 aa17.53■□□□□ 0.4
SH3TC1-220ENST00000511002 RUFY4Q6ZNE9 571 aa17.53■□□□□ 0.4
SH3TC1-220ENST00000511002 HAS1Q92839 578 aa17.53■□□□□ 0.4
SH3TC1-220ENST00000511002 GLG1Q92896 1179 aa17.53■□□□□ 0.4
SH3TC1-220ENST00000511002 ZDHHC9Q9Y397 364 aa17.53■□□□□ 0.4
SH3TC1-220ENST00000511002 CDH23Q9H251 3354 aa17.53■□□□□ 0.4
SH3TC1-220ENST00000511002 ATG7O95352 703 aa17.52■□□□□ 0.4
SH3TC1-220ENST00000511002 F13A1P00488 732 aa17.52■□□□□ 0.4
SH3TC1-220ENST00000511002 CXCL10P02778 98 aa17.52■□□□□ 0.4
SH3TC1-220ENST00000511002 CTSHP09668 335 aa17.52■□□□□ 0.4
SH3TC1-220ENST00000511002 PPFIA1Q13136 1202 aa17.52■□□□□ 0.4
SH3TC1-220ENST00000511002 GRIK4Q16099 956 aa17.52■□□□□ 0.4
SH3TC1-220ENST00000511002 CALCRLQ16602 461 aa17.52■□□□□ 0.4
SH3TC1-220ENST00000511002 LRCH2Q5VUJ6 765 aa17.52■□□□□ 0.4
SH3TC1-220ENST00000511002 TIFAQ96CG3 184 aa17.52■□□□□ 0.4
SH3TC1-220ENST00000511002 CDX2Q99626 313 aaPredicted RBP17.52■□□□□ 0.4
SH3TC1-220ENST00000511002 NKX2-4Q9H2Z4 354 aa17.52■□□□□ 0.4
SH3TC1-220ENST00000511002 SMARCAD1Q9H4L7 1026 aa17.52■□□□□ 0.4
SH3TC1-220ENST00000511002 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.52■□□□□ 0.4
SH3TC1-220ENST00000511002 TBC1D22BQ9NU19 505 aa17.52■□□□□ 0.4
SH3TC1-220ENST00000511002 ERAP1Q9NZ08 941 aa17.52■□□□□ 0.4
SH3TC1-220ENST00000511002 SLC4A7Q9Y6M7 1214 aa17.52■□□□□ 0.4
SH3TC1-220ENST00000511002 COL6A3P12111 3177 aa17.52■□□□□ 0.39
SH3TC1-220ENST00000511002 TBX3O15119 743 aa17.51■□□□□ 0.39
SH3TC1-220ENST00000511002 GAS7O60861 476 aa17.51■□□□□ 0.39
SH3TC1-220ENST00000511002 PSMD10O75832 226 aa17.51■□□□□ 0.39
SH3TC1-220ENST00000511002 BRD1O95696 1058 aa17.51■□□□□ 0.39
SH3TC1-220ENST00000511002 ORC2Q13416 577 aaPredicted RBP17.51■□□□□ 0.39
SH3TC1-220ENST00000511002 PLCB4Q15147 1175 aa17.51■□□□□ 0.39
SH3TC1-220ENST00000511002 MARCH8Q5T0T0 291 aa17.51■□□□□ 0.39
SH3TC1-220ENST00000511002 ABHD15Q6UXT9 468 aa17.51■□□□□ 0.39
SH3TC1-220ENST00000511002 TMCO2Q7Z6W1 182 aaPredicted RBP17.51■□□□□ 0.39
SH3TC1-220ENST00000511002 CCDC60Q8IWA6 550 aaPredicted RBP17.51■□□□□ 0.39
SH3TC1-220ENST00000511002 TRAPPC12Q8WVT3 735 aa17.51■□□□□ 0.39
SH3TC1-220ENST00000511002 MYLIPQ8WY64 445 aa17.51■□□□□ 0.39
SH3TC1-220ENST00000511002 FAM20AQ96MK3 541 aa17.51■□□□□ 0.39
SH3TC1-220ENST00000511002 MTMR9Q96QG7 549 aa17.51■□□□□ 0.39
SH3TC1-220ENST00000511002 RIT2Q99578 217 aa17.51■□□□□ 0.39
SH3TC1-220ENST00000511002 TEKT3Q9BXF9 490 aa17.51■□□□□ 0.39
SH3TC1-220ENST00000511002 MTIF3Q9H2K0 278 aaKnown RBP17.51■□□□□ 0.39
SH3TC1-220ENST00000511002 UNC45AQ9H3U1 944 aa17.51■□□□□ 0.39
SH3TC1-220ENST00000511002 ZSCAN16Q9H4T2 348 aaPredicted RBP17.51■□□□□ 0.39
SH3TC1-220ENST00000511002 DAXXQ9UER7 740 aaPredicted RBP17.51■□□□□ 0.39
SH3TC1-220ENST00000511002 VAV3Q9UKW4 847 aa17.51■□□□□ 0.39
SH3TC1-220ENST00000511002 NRCAMQ92823 1304 aa17.5■□□□□ 0.39
SH3TC1-220ENST00000511002 IGKV6D-21A0A0A0MT36 114 aa17.5■□□□□ 0.39
SH3TC1-220ENST00000511002 RSPH10B2B2RC85 870 aa17.5■□□□□ 0.39
SH3TC1-220ENST00000511002 CHMP2AO43633 222 aa17.5■□□□□ 0.39
SH3TC1-220ENST00000511002 MARCH6O60337 910 aa17.5■□□□□ 0.39
SH3TC1-220ENST00000511002 ARHGEF15O94989 841 aa17.5■□□□□ 0.39
SH3TC1-220ENST00000511002 RSPH10BP0C881 870 aa17.5■□□□□ 0.39
SH3TC1-220ENST00000511002 PDIA4P13667 645 aaKnown RBP17.5■□□□□ 0.39
SH3TC1-220ENST00000511002 INSRRP14616 1297 aa17.5■□□□□ 0.39
SH3TC1-220ENST00000511002 ATP2A2P16615 1042 aaKnown RBP17.5■□□□□ 0.39
SH3TC1-220ENST00000511002 IGBP1P78318 339 aa17.5■□□□□ 0.39
SH3TC1-220ENST00000511002 DEFB103AP81534 67 aa17.5■□□□□ 0.39
SH3TC1-220ENST00000511002 GRIN2CQ14957 1233 aa17.5■□□□□ 0.39
SH3TC1-220ENST00000511002 C4orf32Q8N8J7 132 aa17.5■□□□□ 0.39
SH3TC1-220ENST00000511002 STXBP5LQ9Y2K9 1186 aa17.5■□□□□ 0.39
SH3TC1-220ENST00000511002 MICAL3Q7RTP6 2002 aa17.5■□□□□ 0.39
SH3TC1-220ENST00000511002 OR52Z1P0C646 297 aa17.49■□□□□ 0.39
SH3TC1-220ENST00000511002 GNAT1P11488 350 aa17.49■□□□□ 0.39
SH3TC1-220ENST00000511002 ACTN1P12814 892 aa17.49■□□□□ 0.39
SH3TC1-220ENST00000511002 STAT5BP51692 787 aa17.49■□□□□ 0.39
SH3TC1-220ENST00000511002 KRT76Q01546 638 aa17.49■□□□□ 0.39
SH3TC1-220ENST00000511002 PTGDRQ13258 359 aa17.49■□□□□ 0.39
SH3TC1-220ENST00000511002 B3GNT9Q6UX72 402 aa17.49■□□□□ 0.39
SH3TC1-220ENST00000511002 SLFN12Q8IYM2 578 aa17.49■□□□□ 0.39
SH3TC1-220ENST00000511002 ZNF576Q9H609 170 aa17.49■□□□□ 0.39
SH3TC1-220ENST00000511002 MYH9P35579 1960 aaKnown RBP17.49■□□□□ 0.39
SH3TC1-220ENST00000511002 TMEM265A0A087WTH1 108 aa17.48■□□□□ 0.39
SH3TC1-220ENST00000511002 MBLAC1A4D2B0 266 aaPredicted RBP17.48■□□□□ 0.39
SH3TC1-220ENST00000511002 BAG4O95429 457 aaKnown RBP17.48■□□□□ 0.39
SH3TC1-220ENST00000511002 ATP4AP20648 1035 aa17.48■□□□□ 0.39
SH3TC1-220ENST00000511002 TXKP42681 527 aa17.48■□□□□ 0.39
SH3TC1-220ENST00000511002 WDR5P61964 334 aaKnown RBP17.48■□□□□ 0.39
SH3TC1-220ENST00000511002 SPIRE1Q08AE8 756 aa17.48■□□□□ 0.39
SH3TC1-220ENST00000511002 FOXD4L6Q3SYB3 417 aaPredicted RBP17.48■□□□□ 0.39
SH3TC1-220ENST00000511002 ZNF746Q6NUN9 644 aaPredicted RBP17.48■□□□□ 0.39
SH3TC1-220ENST00000511002 CNKSR3Q6P9H4 555 aa17.48■□□□□ 0.39
SH3TC1-220ENST00000511002 FOXD4L3Q6VB84 417 aaPredicted RBP17.48■□□□□ 0.39
SH3TC1-220ENST00000511002 PLPPR4Q7Z2D5 763 aa17.48■□□□□ 0.39
SH3TC1-220ENST00000511002 DBF4BQ8NFT6 615 aa17.48■□□□□ 0.39
SH3TC1-220ENST00000511002 AZI2Q9H6S1 392 aa17.48■□□□□ 0.39
SH3TC1-220ENST00000511002 TCEAL9Q9UHQ7 104 aa17.48■□□□□ 0.39
SH3TC1-220ENST00000511002 TUBE1Q9UJT0 475 aa17.48■□□□□ 0.39
SH3TC1-220ENST00000511002 TRPC6Q9Y210 931 aa17.48■□□□□ 0.39
SH3TC1-220ENST00000511002 CLIC4Q9Y696 253 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms