RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 ATG2AQ2TAZ0 1938 aa13.68□□□□□ -0.22
CHFR-208ENST00000511001 COL4A6Q14031 1691 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 POTEB3A0JP26 581 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 LINC01553A4QN01 128 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 TNFRSF10AO00220 468 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 CPLX1O14810 134 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 LPXNO60711 386 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 PFKFB2O60825 505 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 DTNBO60941 627 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 AMHP03971 560 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 USP11P51784 963 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 MRPS6P82932 125 aaKnown RBP13.67□□□□□ -0.22
CHFR-208ENST00000511001 HTRA4P83105 476 aaPredicted RBP13.67□□□□□ -0.22
CHFR-208ENST00000511001 CCDC85BQ15834 202 aaPredicted RBP13.67□□□□□ -0.22
CHFR-208ENST00000511001 PRR16Q569H4 304 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 FBXO47Q5MNV8 452 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 KRT40Q6A162 431 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 ZNF746Q6NUN9 644 aaPredicted RBP13.67□□□□□ -0.22
CHFR-208ENST00000511001 POTEBQ6S5H4 581 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 DAGLBQ8NCG7 672 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 ATP8B4Q8TF62 1192 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 APBB2Q92870 758 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 TOP1MTQ969P6 601 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 IFIH1Q9BYX4 1025 aaKnown RBP13.67□□□□□ -0.22
CHFR-208ENST00000511001 TBC1D22BQ9NU19 505 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 PCDHA2Q9Y5H9 948 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 MTCH2Q9Y6C9 303 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 KIAA1671Q9BY89 1806 aa13.67□□□□□ -0.22
CHFR-208ENST00000511001 BRWD1Q9NSI6 2320 aa13.66□□□□□ -0.22
CHFR-208ENST00000511001 ZBTB42B2RXF5 422 aa13.66□□□□□ -0.22
CHFR-208ENST00000511001 BACH1O14867 736 aa13.66□□□□□ -0.22
CHFR-208ENST00000511001 MSH4O15457 936 aa13.66□□□□□ -0.22
CHFR-208ENST00000511001 HBP1O60381 514 aa13.66□□□□□ -0.22
CHFR-208ENST00000511001 CTDNEP1O95476 244 aa13.66□□□□□ -0.22
CHFR-208ENST00000511001 SEC24BO95487 1268 aa13.66□□□□□ -0.22
CHFR-208ENST00000511001 SLC26A2P50443 739 aa13.66□□□□□ -0.22
CHFR-208ENST00000511001 AK2P54819 239 aa13.66□□□□□ -0.22
CHFR-208ENST00000511001 ERVK-21P61565 698 aa13.66□□□□□ -0.22
CHFR-208ENST00000511001 GRB10Q13322 594 aa13.66□□□□□ -0.22
CHFR-208ENST00000511001 FAM160B1Q5W0V3 765 aa13.66□□□□□ -0.22
CHFR-208ENST00000511001 SWSAP1Q6NVH7 229 aa13.66□□□□□ -0.22
CHFR-208ENST00000511001 MIS18BP1Q6P0N0 1132 aa13.66□□□□□ -0.22
CHFR-208ENST00000511001 PDXDC2PQ6P474 469 aa13.66□□□□□ -0.22
CHFR-208ENST00000511001 CPLX2Q6PUV4 134 aaKnown RBP13.66□□□□□ -0.22
CHFR-208ENST00000511001 MTHFD1LQ6UB35 978 aa13.66□□□□□ -0.22
CHFR-208ENST00000511001 RSPH3Q86UC2 560 aa13.66□□□□□ -0.22
CHFR-208ENST00000511001 BLIDQ8IZY5 108 aa13.66□□□□□ -0.22
CHFR-208ENST00000511001 FAM177A1Q8N128 213 aaPredicted RBP13.66□□□□□ -0.22
CHFR-208ENST00000511001 SP7Q8TDD2 431 aaPredicted RBP13.66□□□□□ -0.22
CHFR-208ENST00000511001 TBCKQ8TEA7 893 aa13.66□□□□□ -0.22
CHFR-208ENST00000511001 FAM49AQ9H0Q0 323 aaPredicted RBP13.66□□□□□ -0.22
CHFR-208ENST00000511001 AGO3Q9H9G7 860 aaKnown RBP13.66□□□□□ -0.22
CHFR-208ENST00000511001 ZNF302Q9NR11 478 aa13.66□□□□□ -0.22
CHFR-208ENST00000511001 MAFBQ9Y5Q3 323 aaPredicted RBP13.66□□□□□ -0.22
CHFR-208ENST00000511001 STK36Q9NRP7 1315 aa13.65□□□□□ -0.22
CHFR-208ENST00000511001 SMIM35A0A1B0GVV1 85 aa13.65□□□□□ -0.22
CHFR-208ENST00000511001 LARGE1O95461 756 aa13.65□□□□□ -0.22
CHFR-208ENST00000511001 RPLP2P05387 115 aaKnown RBP13.65□□□□□ -0.22
CHFR-208ENST00000511001 KLRC1P26715 233 aa13.65□□□□□ -0.22
CHFR-208ENST00000511001 KRT76Q01546 638 aa13.65□□□□□ -0.22
CHFR-208ENST00000511001 LINC01599Q8WXQ3 324 aa13.65□□□□□ -0.22
CHFR-208ENST00000511001 SLC5A5Q92911 643 aa13.65□□□□□ -0.22
CHFR-208ENST00000511001 TNPO1Q92973 898 aaKnown RBP13.65□□□□□ -0.22
CHFR-208ENST00000511001 MBOAT7Q96N66 472 aa13.65□□□□□ -0.22
CHFR-208ENST00000511001 SLKQ9H2G2 1235 aaPredicted RBP13.65□□□□□ -0.22
CHFR-208ENST00000511001 KCNJ14Q9UNX9 436 aa13.65□□□□□ -0.22
CHFR-208ENST00000511001 INSL6Q9Y581 213 aa13.65□□□□□ -0.22
CHFR-208ENST00000511001 TRPV2Q9Y5S1 764 aa13.65□□□□□ -0.22
CHFR-208ENST00000511001 MYO7AQ13402 2215 aa13.65□□□□□ -0.22
CHFR-208ENST00000511001 COL1A2P08123 1366 aa13.65□□□□□ -0.22
CHFR-208ENST00000511001 IGSF9BQ9UPX0 1349 aa13.64□□□□□ -0.23
CHFR-208ENST00000511001 KDM3AQ9Y4C1 1321 aa13.64□□□□□ -0.23
CHFR-208ENST00000511001 FNDC1Q4ZHG4 1894 aaPredicted RBP13.64□□□□□ -0.23
CHFR-208ENST00000511001 CYP3A7-CYP3A51PA0A087WV96 503 aa13.64□□□□□ -0.23
CHFR-208ENST00000511001 UPP2O95045 317 aa13.64□□□□□ -0.23
CHFR-208ENST00000511001 TDP2O95551 362 aa13.64□□□□□ -0.23
CHFR-208ENST00000511001 CYP3A7P24462 503 aa13.64□□□□□ -0.23
CHFR-208ENST00000511001 TMEM62Q0P6H9 643 aa13.64□□□□□ -0.23
CHFR-208ENST00000511001 Q4G0T1 1027 aa13.64□□□□□ -0.23
CHFR-208ENST00000511001 ZNF484Q5JVG2 852 aa13.64□□□□□ -0.23
CHFR-208ENST00000511001 GALNT17Q6IS24 598 aa13.64□□□□□ -0.23
CHFR-208ENST00000511001 TSHZ1Q6ZSZ6 1077 aa13.64□□□□□ -0.23
CHFR-208ENST00000511001 SMAP1Q8IYB5 467 aaPredicted RBP13.64□□□□□ -0.23
CHFR-208ENST00000511001 GDPD5Q8WTR4 605 aa13.64□□□□□ -0.23
CHFR-208ENST00000511001 GJA10Q969M2 543 aa13.64□□□□□ -0.23
CHFR-208ENST00000511001 TGS1Q96RS0 853 aaKnown RBP13.64□□□□□ -0.23
CHFR-208ENST00000511001 C17orf80Q9BSJ5 609 aa13.64□□□□□ -0.23
CHFR-208ENST00000511001 PHF20Q9BVI0 1012 aa13.64□□□□□ -0.23
CHFR-208ENST00000511001 C22orf23Q9BZE7 217 aa13.64□□□□□ -0.23
CHFR-208ENST00000511001 SUGCTQ9HAC7 445 aa13.64□□□□□ -0.23
CHFR-208ENST00000511001 GJB4Q9NTQ9 266 aa13.64□□□□□ -0.23
CHFR-208ENST00000511001 GABBR1Q9UBS5 961 aa13.64□□□□□ -0.23
CHFR-208ENST00000511001 PCDHA10Q9Y5I2 948 aa13.64□□□□□ -0.23
CHFR-208ENST00000511001 SQORQ9Y6N5 450 aa13.64□□□□□ -0.23
CHFR-208ENST00000511001 ENPP3O14638 875 aa13.63□□□□□ -0.23
CHFR-208ENST00000511001 ZNF862O60290 1169 aa13.63□□□□□ -0.23
CHFR-208ENST00000511001 PSMD10O75832 226 aa13.63□□□□□ -0.23
CHFR-208ENST00000511001 C22orf31O95567 290 aa13.63□□□□□ -0.23
CHFR-208ENST00000511001 PSAPP07602 524 aa13.63□□□□□ -0.23
CHFR-208ENST00000511001 FDPSP14324 419 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms