RNA–Protein interactions for RNA: ENST00000509967.6

TRIO-214, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-214ENST00000509967 KRT1P04264 644 aa9.97□□□□□ -0.81
TRIO-214ENST00000509967 DLATP10515 647 aaKnown RBP9.97□□□□□ -0.81
TRIO-214ENST00000509967 ATP5OP48047 213 aa9.97□□□□□ -0.81
TRIO-214ENST00000509967 RPS6KA2Q15349 733 aa9.97□□□□□ -0.81
TRIO-214ENST00000509967 RFX6Q8HWS3 928 aa9.97□□□□□ -0.81
TRIO-214ENST00000509967 DHX40Q8IX18 779 aaKnown RBP9.97□□□□□ -0.81
TRIO-214ENST00000509967 PDIK1LQ8N165 341 aa9.97□□□□□ -0.81
TRIO-214ENST00000509967 MASTLQ96GX5 879 aa9.97□□□□□ -0.81
TRIO-214ENST00000509967 GCOM2Q9BZD3 368 aaPredicted RBP9.97□□□□□ -0.81
TRIO-214ENST00000509967 TUFT1Q9NNX1 390 aa9.97□□□□□ -0.81
TRIO-214ENST00000509967 UBN2Q6ZU65 1347 aa9.97□□□□□ -0.81
TRIO-214ENST00000509967 MAPK13O15264 365 aa9.97□□□□□ -0.81
TRIO-214ENST00000509967 CPP00450 1065 aa9.97□□□□□ -0.81
TRIO-214ENST00000509967 MYCNP04198 464 aaPredicted RBP9.97□□□□□ -0.81
TRIO-214ENST00000509967 KRT10P13645 584 aa9.97□□□□□ -0.81
TRIO-214ENST00000509967 ATP1A2P50993 1020 aa9.97□□□□□ -0.81
TRIO-214ENST00000509967 GPC5P78333 572 aa9.97□□□□□ -0.81
TRIO-214ENST00000509967 SUSD4Q5VX71 490 aa9.97□□□□□ -0.81
TRIO-214ENST00000509967 SDCCAG3Q96C92 435 aa9.97□□□□□ -0.81
TRIO-214ENST00000509967 C2orf40Q9H1Z8 148 aa9.97□□□□□ -0.81
TRIO-214ENST00000509967 DDX56Q9NY93 547 aaKnown RBP9.97□□□□□ -0.81
TRIO-214ENST00000509967 NEDD4P46934 1319 aa9.96□□□□□ -0.81
TRIO-214ENST00000509967 A0A1B0GTH6 734 aa9.96□□□□□ -0.81
TRIO-214ENST00000509967 CFAP73A6NFT4 308 aa9.96□□□□□ -0.81
TRIO-214ENST00000509967 CTNND1O60716 968 aaKnown RBP9.96□□□□□ -0.81
TRIO-214ENST00000509967 TTC4O95801 387 aa9.96□□□□□ -0.81
TRIO-214ENST00000509967 SKIP12755 728 aa9.96□□□□□ -0.81
TRIO-214ENST00000509967 ARMCX2Q7L311 632 aa9.96□□□□□ -0.81
TRIO-214ENST00000509967 ABCB6Q9NP58 842 aa9.96□□□□□ -0.81
TRIO-214ENST00000509967 SEPT9Q9UHD8 586 aaPredicted RBP9.96□□□□□ -0.81
TRIO-214ENST00000509967 AFF2P51816 1311 aa9.96□□□□□ -0.81
TRIO-214ENST00000509967 PRKAB2O43741 272 aa9.96□□□□□ -0.81
TRIO-214ENST00000509967 DTNBO60941 627 aa9.96□□□□□ -0.81
TRIO-214ENST00000509967 DNAJC8O75937 253 aaPredicted RBP9.96□□□□□ -0.81
TRIO-214ENST00000509967 STX1BP61266 288 aa9.96□□□□□ -0.81
TRIO-214ENST00000509967 YWHAGP61981 247 aaKnown RBP eCLIP9.96□□□□□ -0.81
TRIO-214ENST00000509967 FOXO4P98177 505 aa9.96□□□□□ -0.81
TRIO-214ENST00000509967 ARHGEF6Q15052 776 aa9.96□□□□□ -0.81
TRIO-214ENST00000509967 SLC27A3Q5K4L6 730 aa9.96□□□□□ -0.81
TRIO-214ENST00000509967 XXYLT1Q8NBI6 393 aa9.96□□□□□ -0.81
TRIO-214ENST00000509967 DHX38Q92620 1227 aaKnown RBP9.96□□□□□ -0.81
TRIO-214ENST00000509967 EPSTI1Q96J88 318 aa9.96□□□□□ -0.81
TRIO-214ENST00000509967 TTC1Q99614 292 aa9.96□□□□□ -0.81
TRIO-214ENST00000509967 ST7Q9NRC1 585 aa9.96□□□□□ -0.81
TRIO-214ENST00000509967 CEMIPQ8WUJ3 1361 aa9.96□□□□□ -0.82
TRIO-214ENST00000509967 PDXKO00764 312 aa9.96□□□□□ -0.82
TRIO-214ENST00000509967 MT-ND3P03897 115 aa9.96□□□□□ -0.82
TRIO-214ENST00000509967 METTL23Q86XA0 190 aa9.96□□□□□ -0.82
TRIO-214ENST00000509967 ENAHQ8N8S7 591 aaPredicted RBP9.96□□□□□ -0.82
TRIO-214ENST00000509967 SYN2Q92777 582 aaPredicted RBP9.96□□□□□ -0.82
TRIO-214ENST00000509967 MED10Q9BTT4 135 aa9.96□□□□□ -0.82
TRIO-214ENST00000509967 SEC31BQ9NQW1 1179 aa9.96□□□□□ -0.82
TRIO-214ENST00000509967 CYP26B1Q9NR63 512 aa9.96□□□□□ -0.82
TRIO-214ENST00000509967 SETD1BQ9UPS6 1966 aaKnown RBP9.96□□□□□ -0.82
TRIO-214ENST00000509967 WDR64B1ANS9 1081 aa9.96□□□□□ -0.82
TRIO-214ENST00000509967 SGK1O00141 431 aa9.96□□□□□ -0.82
TRIO-214ENST00000509967 KRT37O76014 449 aa9.96□□□□□ -0.82
TRIO-214ENST00000509967 SLC1A1P43005 524 aa9.96□□□□□ -0.82
TRIO-214ENST00000509967 SPARCL1Q14515 664 aa9.96□□□□□ -0.82
TRIO-214ENST00000509967 KNOP1Q1ED39 458 aaKnown RBP9.96□□□□□ -0.82
TRIO-214ENST00000509967 SMCR8Q8TEV9 937 aaPredicted RBP9.96□□□□□ -0.82
TRIO-214ENST00000509967 CCDC127Q96BQ5 260 aa9.96□□□□□ -0.82
TRIO-214ENST00000509967 CEP170P1Q96L14 293 aa9.96□□□□□ -0.82
TRIO-214ENST00000509967 TRIM62Q9BVG3 475 aa9.96□□□□□ -0.82
TRIO-214ENST00000509967 UBE2TQ9NPD8 197 aaPredicted RBP9.96□□□□□ -0.82
TRIO-214ENST00000509967 FAM8A1Q9UBU6 413 aa9.96□□□□□ -0.82
TRIO-214ENST00000509967 NR3C1P04150 777 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 C2orf54Q08AI8 447 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 RC3H1Q5TC82 1133 aaKnown RBP9.95□□□□□ -0.82
TRIO-214ENST00000509967 KRT27Q7Z3Y8 459 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 KIAA0825Q8IV33 1275 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 PSMD1Q99460 953 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 TMEM47Q9BQJ4 181 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.95□□□□□ -0.821e-7■■□□□ 13.5
TRIO-214ENST00000509967 GOLPH3LQ9H4A5 285 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 DCP1AQ9NPI6 582 aaPredicted RBP9.95□□□□□ -0.82
TRIO-214ENST00000509967 GINM1Q9NU53 330 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 SLC12A6Q9UHW9 1150 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 HERC5Q9UII4 1024 aaKnown RBP9.95□□□□□ -0.82
TRIO-214ENST00000509967 CEP170BQ9Y4F5 1589 aaPredicted RBP9.95□□□□□ -0.82
TRIO-214ENST00000509967 CD163L1Q9NR16 1453 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 AP3B1O00203 1094 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 PLTPP55058 493 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 ARL4CP56559 192 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 CYP4A11Q02928 519 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 TMEM35BQ8NCS4 154 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 MGARPQ8TDB4 240 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 DCPSQ96C86 337 aaKnown RBP9.95□□□□□ -0.82
TRIO-214ENST00000509967 C7orf25Q9BPX7 421 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 TRIM15Q9C019 465 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 TMEM60Q9H2L4 133 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 PSD3Q9NYI0 1048 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 SH3BP5O60239 455 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 S100BP04271 92 aaPredicted RBP9.95□□□□□ -0.82
TRIO-214ENST00000509967 CYP19A1P11511 503 aaPredicted RBP9.95□□□□□ -0.82
TRIO-214ENST00000509967 LIG3P49916 1009 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 COG7P83436 770 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 CFAP61Q8NHU2 1237 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 KLHL29Q96CT2 875 aa9.95□□□□□ -0.82
TRIO-214ENST00000509967 INO80BQ9C086 356 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms