RNA–Protein interactions for RNA: ENST00000509861.1

CSF1R-204, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 2

Gene CSF1R, Length 886 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-204ENST00000509861 UGCGQ16739 394 aa13.33□□□□□ -0.28
CSF1R-204ENST00000509861 TRIM71Q2Q1W2 868 aaKnown RBP13.33□□□□□ -0.28
CSF1R-204ENST00000509861 ZNF484Q5JVG2 852 aa13.33□□□□□ -0.28
CSF1R-204ENST00000509861 MARCH8Q5T0T0 291 aa13.33□□□□□ -0.28
CSF1R-204ENST00000509861 NCAPH2Q6IBW4 605 aa13.33□□□□□ -0.28
CSF1R-204ENST00000509861 TAF2Q6P1X5 1199 aa13.33□□□□□ -0.28
CSF1R-204ENST00000509861 BRAPQ7Z569 592 aa13.33□□□□□ -0.28
CSF1R-204ENST00000509861 WNT8BQ93098 351 aa13.33□□□□□ -0.28
CSF1R-204ENST00000509861 TUBE1Q9UJT0 475 aa13.33□□□□□ -0.28
CSF1R-204ENST00000509861 PCDHB6Q9Y5E3 794 aa13.33□□□□□ -0.28
CSF1R-204ENST00000509861 COL1A2P08123 1366 aa13.32□□□□□ -0.28
CSF1R-204ENST00000509861 OATP04181 439 aa13.32□□□□□ -0.28
CSF1R-204ENST00000509861 P4HBP07237 508 aaKnown RBP13.32□□□□□ -0.28
CSF1R-204ENST00000509861 CKBP12277 381 aa13.32□□□□□ -0.28
CSF1R-204ENST00000509861 SELPP16109 830 aa13.32□□□□□ -0.28
CSF1R-204ENST00000509861 THPOP40225 353 aa13.32□□□□□ -0.28
CSF1R-204ENST00000509861 EPHB4P54760 987 aa13.32□□□□□ -0.28
CSF1R-204ENST00000509861 PSMC5P62195 406 aa13.32□□□□□ -0.28
CSF1R-204ENST00000509861 TRMT1LQ7Z2T5 733 aaKnown RBP13.32□□□□□ -0.28
CSF1R-204ENST00000509861 FERMT3Q86UX7 667 aa13.32□□□□□ -0.28
CSF1R-204ENST00000509861 C4orf32Q8N8J7 132 aa13.32□□□□□ -0.28
CSF1R-204ENST00000509861 BANK1Q8NDB2 785 aa13.32□□□□□ -0.28
CSF1R-204ENST00000509861 TRAPPC12Q8WVT3 735 aa13.32□□□□□ -0.28
CSF1R-204ENST00000509861 SCLYQ96I15 445 aa13.32□□□□□ -0.28
CSF1R-204ENST00000509861 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.32□□□□□ -0.28
CSF1R-204ENST00000509861 NRBP2Q9NSY0 501 aa13.32□□□□□ -0.28
CSF1R-204ENST00000509861 TRIP12Q14669 1992 aaPredicted RBP13.32□□□□□ -0.28
CSF1R-204ENST00000509861 MYH9P35579 1960 aaKnown RBP13.31□□□□□ -0.28
CSF1R-204ENST00000509861 KAT6AQ92794 2004 aa13.31□□□□□ -0.28
CSF1R-204ENST00000509861 A0A1W2PPC1 479 aa13.31□□□□□ -0.28
CSF1R-204ENST00000509861 ZBTB42B2RXF5 422 aa13.31□□□□□ -0.28
CSF1R-204ENST00000509861 LAD1O00515 517 aa13.31□□□□□ -0.28
CSF1R-204ENST00000509861 STX6O43752 255 aa13.31□□□□□ -0.28
CSF1R-204ENST00000509861 DKC1O60832 514 aaKnown RBP eCLIP13.31□□□□□ -0.28
CSF1R-204ENST00000509861 CAND2O75155 1236 aa13.31□□□□□ -0.28
CSF1R-204ENST00000509861 STBD1O95210 358 aa13.31□□□□□ -0.28
CSF1R-204ENST00000509861 RFC2P35250 354 aa13.31□□□□□ -0.28
CSF1R-204ENST00000509861 QARSP47897 775 aaKnown RBP13.31□□□□□ -0.28
CSF1R-204ENST00000509861 PTGDRQ13258 359 aa13.31□□□□□ -0.28
CSF1R-204ENST00000509861 XKR3Q5GH77 459 aa13.31□□□□□ -0.28
CSF1R-204ENST00000509861 ZNF618Q5T7W0 954 aa13.31□□□□□ -0.28
CSF1R-204ENST00000509861 MTHFD1LQ6UB35 978 aa13.31□□□□□ -0.28
CSF1R-204ENST00000509861 RUFY4Q6ZNE9 571 aa13.31□□□□□ -0.28
CSF1R-204ENST00000509861 LRRC8DQ7L1W4 858 aa13.31□□□□□ -0.28
CSF1R-204ENST00000509861 RPAINQ86UA6 219 aa13.31□□□□□ -0.28
CSF1R-204ENST00000509861 IL23AQ9NPF7 189 aa13.31□□□□□ -0.28
CSF1R-204ENST00000509861 CEP131Q9UPN4 1083 aa13.31□□□□□ -0.28
CSF1R-204ENST00000509861 MTMR6Q9Y217 621 aa13.31□□□□□ -0.28
CSF1R-204ENST00000509861 PCDHA2Q9Y5H9 948 aa13.31□□□□□ -0.28
CSF1R-204ENST00000509861 PARNO95453 639 aaKnown RBP13.3□□□□□ -0.28
CSF1R-204ENST00000509861 RPLP2P05387 115 aaKnown RBP13.3□□□□□ -0.28
CSF1R-204ENST00000509861 ACRP10323 421 aa13.3□□□□□ -0.28
CSF1R-204ENST00000509861 PDIA4P13667 645 aaKnown RBP13.3□□□□□ -0.28
CSF1R-204ENST00000509861 KLRC1P26715 233 aa13.3□□□□□ -0.28
CSF1R-204ENST00000509861 TECP42680 631 aa13.3□□□□□ -0.28
CSF1R-204ENST00000509861 TMEM266Q2M3C6 531 aa13.3□□□□□ -0.28
CSF1R-204ENST00000509861 TRAF7Q6Q0C0 670 aa13.3□□□□□ -0.28
CSF1R-204ENST00000509861 C16orf59Q7L2K0 433 aa13.3□□□□□ -0.28
CSF1R-204ENST00000509861 RSPH3Q86UC2 560 aa13.3□□□□□ -0.28
CSF1R-204ENST00000509861 RPUSD2Q8IZ73 545 aaKnown RBP13.3□□□□□ -0.28
CSF1R-204ENST00000509861 TDHQ8IZJ6 230 aa13.3□□□□□ -0.28
CSF1R-204ENST00000509861 NEK9Q8TD19 979 aa13.3□□□□□ -0.28
CSF1R-204ENST00000509861 ZBTB10Q96DT7 871 aa13.3□□□□□ -0.28
CSF1R-204ENST00000509861 HSD17B14Q9BPX1 270 aa13.3□□□□□ -0.28
CSF1R-204ENST00000509861 LXNQ9BS40 222 aa13.3□□□□□ -0.28
CSF1R-204ENST00000509861 NIFKQ9BYG3 293 aaKnown RBP13.3□□□□□ -0.28
CSF1R-204ENST00000509861 RGL1Q9NZL6 768 aa13.3□□□□□ -0.28
CSF1R-204ENST00000509861 WDR81Q562E7 1941 aa13.3□□□□□ -0.28
CSF1R-204ENST00000509861 POTEMA6NI47 508 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 DDX11L8A8MPP1 907 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 RSPH10B2B2RC85 870 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 MAGEB2O15479 319 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 SLITRK3O94933 977 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 C22orf31O95567 290 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 PFKMP08237 780 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 RSPH10BP0C881 870 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 PRPHP41219 470 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 FXR2P51116 673 aaKnown RBP eCLIP13.29□□□□□ -0.28
CSF1R-204ENST00000509861 CYP4A11Q02928 519 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 RESTQ13127 1097 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 CTTNQ14247 550 aaKnown RBP13.29□□□□□ -0.28
CSF1R-204ENST00000509861 SHHQ15465 462 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 TMEM240Q5SV17 173 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 C9orf50Q5SZB4 431 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 PSRC1Q6PGN9 363 aaPredicted RBP13.29□□□□□ -0.28
CSF1R-204ENST00000509861 DEFB128Q7Z7B8 93 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 TPH2Q8IWU9 490 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 C4orf19Q8IY42 314 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 SPRYD3Q8NCJ5 442 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 DNAJB3Q8WWF6 145 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 VWCEQ96DN2 955 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 DYDC2Q96IM9 177 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 EIF2AK1Q9BQI3 630 aaKnown RBP13.29□□□□□ -0.28
CSF1R-204ENST00000509861 FAM49AQ9H0Q0 323 aaPredicted RBP13.29□□□□□ -0.28
CSF1R-204ENST00000509861 ZSWIM4Q9H7M6 989 aa13.29□□□□□ -0.28
CSF1R-204ENST00000509861 WRAP73Q9P2S5 460 aaPredicted RBP13.29□□□□□ -0.28
CSF1R-204ENST00000509861 SEPT9Q9UHD8 586 aaPredicted RBP13.29□□□□□ -0.28
CSF1R-204ENST00000509861 TANC1Q9C0D5 1861 aa13.28□□□□□ -0.28
CSF1R-204ENST00000509861 SMIM35A0A1B0GVV1 85 aa13.28□□□□□ -0.28
CSF1R-204ENST00000509861 TMEM150BA6NC51 233 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms