RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 NSUN7Q8NE18 718 aaKnown RBP16.6■□□□□ 0.25
HMGCL-208ENST00000509389 ZBTB10Q96DT7 871 aa16.6■□□□□ 0.25
HMGCL-208ENST00000509389 NFASCO94856 1347 aa16.6■□□□□ 0.25
HMGCL-208ENST00000509389 MYO7AQ13402 2215 aa16.59■□□□□ 0.25
HMGCL-208ENST00000509389 SMCO2A6NFE2 343 aa16.59■□□□□ 0.25
HMGCL-208ENST00000509389 RRN3P2A6NIE6 340 aa16.59■□□□□ 0.25
HMGCL-208ENST00000509389 STXBP3O00186 592 aa16.59■□□□□ 0.25
HMGCL-208ENST00000509389 ENPP3O14638 875 aa16.59■□□□□ 0.25
HMGCL-208ENST00000509389 FOSP01100 380 aaPredicted RBP16.59■□□□□ 0.25
HMGCL-208ENST00000509389 ARP10275 920 aa16.59■□□□□ 0.25
HMGCL-208ENST00000509389 ACTR2P61160 394 aa16.59■□□□□ 0.25
HMGCL-208ENST00000509389 GPM6BQ13491 265 aa16.59■□□□□ 0.25
HMGCL-208ENST00000509389 PTPROQ16827 1216 aa16.59■□□□□ 0.25
HMGCL-208ENST00000509389 FBXO47Q5MNV8 452 aa16.59■□□□□ 0.25
HMGCL-208ENST00000509389 TEX2Q8IWB9 1127 aa16.59■□□□□ 0.25
HMGCL-208ENST00000509389 SDF4Q9BRK5 362 aa16.59■□□□□ 0.25
HMGCL-208ENST00000509389 ANO3Q9BYT9 981 aa16.59■□□□□ 0.25
HMGCL-208ENST00000509389 AZI2Q9H6S1 392 aa16.59■□□□□ 0.25
HMGCL-208ENST00000509389 FAM217BQ9NTX9 383 aaPredicted RBP16.59■□□□□ 0.25
HMGCL-208ENST00000509389 TMEM260Q9NX78 707 aa16.59■□□□□ 0.25
HMGCL-208ENST00000509389 CDY2AQ9Y6F7 541 aa16.59■□□□□ 0.25
HMGCL-208ENST00000509389 LOXHD1Q8IVV2 1947 aa16.59■□□□□ 0.25
HMGCL-208ENST00000509389 TTC3P53804 2025 aa16.59■□□□□ 0.25
HMGCL-208ENST00000509389 GOLGA8AA7E2F4 631 aa16.58■□□□□ 0.24
HMGCL-208ENST00000509389 hCG_1984214I3L0E3 225 aa16.58■□□□□ 0.24
HMGCL-208ENST00000509389 CDC27P30260 824 aa16.58■□□□□ 0.24
HMGCL-208ENST00000509389 MRPS6P82932 125 aaKnown RBP16.58■□□□□ 0.24
HMGCL-208ENST00000509389 ITGB3BPQ13352 177 aaPredicted RBP16.58■□□□□ 0.24
HMGCL-208ENST00000509389 PLCB4Q15147 1175 aa16.58■□□□□ 0.24
HMGCL-208ENST00000509389 CEP55Q53EZ4 464 aa16.58■□□□□ 0.24
HMGCL-208ENST00000509389 ZNF713Q8N859 430 aaPredicted RBP16.58■□□□□ 0.24
HMGCL-208ENST00000509389 AGO4Q9HCK5 861 aaKnown RBP16.58■□□□□ 0.24
HMGCL-208ENST00000509389 FOXD4L1Q9NU39 408 aa16.58■□□□□ 0.24
HMGCL-208ENST00000509389 BARHL2Q9NY43 387 aa16.58■□□□□ 0.24
HMGCL-208ENST00000509389 RAPGEFL1Q9UHV5 662 aa16.58■□□□□ 0.24
HMGCL-208ENST00000509389 TRPC6Q9Y210 931 aa16.58■□□□□ 0.24
HMGCL-208ENST00000509389 MEIS1O00470 390 aa16.57■□□□□ 0.24
HMGCL-208ENST00000509389 KCNA5P22460 613 aa16.57■□□□□ 0.24
HMGCL-208ENST00000509389 SREBF1P36956 1147 aa16.57■□□□□ 0.24
HMGCL-208ENST00000509389 CLK2P49760 499 aaKnown RBP16.57■□□□□ 0.24
HMGCL-208ENST00000509389 STAT5BP51692 787 aa16.57■□□□□ 0.24
HMGCL-208ENST00000509389 NUCB2P80303 420 aa16.57■□□□□ 0.24
HMGCL-208ENST00000509389 AP3B2Q13367 1082 aa16.57■□□□□ 0.24
HMGCL-208ENST00000509389 NTRK3Q16288 839 aa16.57■□□□□ 0.24
HMGCL-208ENST00000509389 LEXMQ3ZCV2 418 aa16.57■□□□□ 0.24
HMGCL-208ENST00000509389 TSHZ1Q6ZSZ6 1077 aa16.57■□□□□ 0.24
HMGCL-208ENST00000509389 PLPPR4Q7Z2D5 763 aa16.57■□□□□ 0.24
HMGCL-208ENST00000509389 FIBCD1Q8N539 461 aa16.57■□□□□ 0.24
HMGCL-208ENST00000509389 TRAPPC12Q8WVT3 735 aa16.57■□□□□ 0.24
HMGCL-208ENST00000509389 C1QTNF1Q9BXJ1 281 aa16.57■□□□□ 0.24
HMGCL-208ENST00000509389 FAM49AQ9H0Q0 323 aaPredicted RBP16.57■□□□□ 0.24
HMGCL-208ENST00000509389 EPHX3Q9H6B9 360 aa16.57■□□□□ 0.24
HMGCL-208ENST00000509389 AGO3Q9H9G7 860 aaKnown RBP16.57■□□□□ 0.24
HMGCL-208ENST00000509389 SMC3Q9UQE7 1217 aa16.57■□□□□ 0.24
HMGCL-208ENST00000509389 ZDHHC9Q9Y397 364 aa16.57■□□□□ 0.24
HMGCL-208ENST00000509389 TCHHQ07283 1943 aa16.57■□□□□ 0.24
HMGCL-208ENST00000509389 ATG7O95352 703 aa16.56■□□□□ 0.24
HMGCL-208ENST00000509389 BRD1O95696 1058 aa16.56■□□□□ 0.24
HMGCL-208ENST00000509389 RPLP2P05387 115 aaKnown RBP16.56■□□□□ 0.24
HMGCL-208ENST00000509389 LINC00271P0C7V0 271 aa16.56■□□□□ 0.24
HMGCL-208ENST00000509389 PDIA4P13667 645 aaKnown RBP16.56■□□□□ 0.24
HMGCL-208ENST00000509389 GJB2P29033 226 aa16.56■□□□□ 0.24
HMGCL-208ENST00000509389 CD52P31358 61 aa16.56■□□□□ 0.24
HMGCL-208ENST00000509389 HMGN5P82970 282 aaKnown RBP16.56■□□□□ 0.24
HMGCL-208ENST00000509389 STK3Q13188 491 aa16.56■□□□□ 0.24
HMGCL-208ENST00000509389 TIGD5Q53EQ6 642 aa16.56■□□□□ 0.24
HMGCL-208ENST00000509389 IER5Q5VY09 327 aa16.56■□□□□ 0.24
HMGCL-208ENST00000509389 CLEC17AQ6ZS10 378 aa16.56■□□□□ 0.24
HMGCL-208ENST00000509389 BANK1Q8NDB2 785 aa16.56■□□□□ 0.24
HMGCL-208ENST00000509389 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.56■□□□□ 0.24
HMGCL-208ENST00000509389 TNPO1Q92973 898 aaKnown RBP16.56■□□□□ 0.24
HMGCL-208ENST00000509389 GLT8D2Q9H1C3 349 aa16.56■□□□□ 0.24
HMGCL-208ENST00000509389 RC3H2Q9HBD1 1191 aaKnown RBP16.56■□□□□ 0.24
HMGCL-208ENST00000509389 NCOA5Q9HCD5 579 aaKnown RBP16.56■□□□□ 0.24
HMGCL-208ENST00000509389 PCDHA2Q9Y5H9 948 aa16.56■□□□□ 0.24
HMGCL-208ENST00000509389 STK36Q9NRP7 1315 aa16.56■□□□□ 0.24
HMGCL-208ENST00000509389 ATG2AQ2TAZ0 1938 aa16.56■□□□□ 0.24
HMGCL-208ENST00000509389 CTNNB1P35222 781 aa16.55■□□□□ 0.24
HMGCL-208ENST00000509389 ADD1P35611 737 aaKnown RBP16.55■□□□□ 0.24
HMGCL-208ENST00000509389 METAP2P50579 478 aaKnown RBP eCLIP16.55■□□□□ 0.24
HMGCL-208ENST00000509389 TMEM62Q0P6H9 643 aa16.55■□□□□ 0.24
HMGCL-208ENST00000509389 PKP1Q13835 747 aa16.55■□□□□ 0.24
HMGCL-208ENST00000509389 TCEAL5Q5H9L2 206 aa16.55■□□□□ 0.24
HMGCL-208ENST00000509389 RTN4RL1Q86UN2 441 aaPredicted RBP16.55■□□□□ 0.24
HMGCL-208ENST00000509389 ADGRA3Q8IWK6 1321 aa16.55■□□□□ 0.24
HMGCL-208ENST00000509389 LINC01599Q8WXQ3 324 aa16.55■□□□□ 0.24
HMGCL-208ENST00000509389 ZNF689Q96CS4 500 aaPredicted RBP16.55■□□□□ 0.24
HMGCL-208ENST00000509389 CD320Q9NPF0 282 aa16.55■□□□□ 0.24
HMGCL-208ENST00000509389 NAP1L2Q9ULW6 460 aaPredicted RBP16.55■□□□□ 0.24
HMGCL-208ENST00000509389 TRPV2Q9Y5S1 764 aa16.55■□□□□ 0.24
HMGCL-208ENST00000509389 SQORQ9Y6N5 450 aa16.55■□□□□ 0.24
HMGCL-208ENST00000509389 IGKV6D-21A0A0A0MT36 114 aa16.54■□□□□ 0.24
HMGCL-208ENST00000509389 POTEB3A0JP26 581 aa16.54■□□□□ 0.24
HMGCL-208ENST00000509389 C5orf67F2Z3F1 127 aa16.54■□□□□ 0.24
HMGCL-208ENST00000509389 DDX39AO00148 427 aaKnown RBP16.54■□□□□ 0.24
HMGCL-208ENST00000509389 JAK2O60674 1132 aa16.54■□□□□ 0.24
HMGCL-208ENST00000509389 CCNE2O96020 404 aa16.54■□□□□ 0.24
HMGCL-208ENST00000509389 RB1P06400 928 aa16.54■□□□□ 0.24
HMGCL-208ENST00000509389 ZNF76P36508 570 aa16.54■□□□□ 0.24
HMGCL-208ENST00000509389 BMPR1AP36894 532 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms