RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 FAM13BQ9NYF5 915 aa16.61■□□□□ 0.25
RNF4-213ENST00000509388 IGSF9BQ9UPX0 1349 aa16.61■□□□□ 0.25
RNF4-213ENST00000509388 KDM3AQ9Y4C1 1321 aa16.61■□□□□ 0.25
RNF4-213ENST00000509388 HBP1O60381 514 aa16.6■□□□□ 0.25
RNF4-213ENST00000509388 MED24O75448 989 aa16.6■□□□□ 0.25
RNF4-213ENST00000509388 GNAT1P11488 350 aa16.6■□□□□ 0.25
RNF4-213ENST00000509388 MUTP22033 750 aa16.6■□□□□ 0.25
RNF4-213ENST00000509388 MNX1P50219 401 aaPredicted RBP16.6■□□□□ 0.25
RNF4-213ENST00000509388 PLCB4Q15147 1175 aa16.6■□□□□ 0.25
RNF4-213ENST00000509388 UGCGQ16739 394 aa16.6■□□□□ 0.25
RNF4-213ENST00000509388 NFRKBQ6P4R8 1299 aa16.6■□□□□ 0.25
RNF4-213ENST00000509388 C4orf19Q8IY42 314 aa16.6■□□□□ 0.25
RNF4-213ENST00000509388 SYMPKQ92797 1274 aaKnown RBP16.6■□□□□ 0.25
RNF4-213ENST00000509388 NACC1Q96RE7 527 aa16.6■□□□□ 0.25
RNF4-213ENST00000509388 NT5C3AQ9H0P0 336 aa16.6■□□□□ 0.25
RNF4-213ENST00000509388 SEPT9Q9UHD8 586 aaPredicted RBP16.6■□□□□ 0.25
RNF4-213ENST00000509388 KIAA1024Q9UPX6 916 aa16.6■□□□□ 0.25
RNF4-213ENST00000509388 HTTP42858 3142 aa16.59■□□□□ 0.25
RNF4-213ENST00000509388 ARVCFO00192 962 aa16.59■□□□□ 0.25
RNF4-213ENST00000509388 HAS3O00219 553 aa16.59■□□□□ 0.25
RNF4-213ENST00000509388 SLC26A4O43511 780 aa16.59■□□□□ 0.25
RNF4-213ENST00000509388 SPATA31C1P0DKV0 1188 aa16.59■□□□□ 0.25
RNF4-213ENST00000509388 SMIM10L2AP0DMW4 78 aa16.59■□□□□ 0.25
RNF4-213ENST00000509388 SMIM10L2BP0DMW5 78 aa16.59■□□□□ 0.25
RNF4-213ENST00000509388 COL6A1P12109 1028 aa16.59■□□□□ 0.25
RNF4-213ENST00000509388 YWHABP31946 246 aaKnown RBP16.59■□□□□ 0.25
RNF4-213ENST00000509388 PTPN11Q06124 597 aaPredicted RBP16.59■□□□□ 0.25
RNF4-213ENST00000509388 PPFIA1Q13136 1202 aa16.59■□□□□ 0.25
RNF4-213ENST00000509388 ADALQ6DHV7 355 aa16.59■□□□□ 0.25
RNF4-213ENST00000509388 SLC39A5Q6ZMH5 540 aa16.59■□□□□ 0.25
RNF4-213ENST00000509388 EPSTI1Q96J88 318 aa16.59■□□□□ 0.25
RNF4-213ENST00000509388 CCSER1Q9C0I3 900 aa16.59■□□□□ 0.25
RNF4-213ENST00000509388 DNM3Q9UQ16 869 aa16.59■□□□□ 0.25
RNF4-213ENST00000509388 NOD1Q9Y239 953 aa16.59■□□□□ 0.25
RNF4-213ENST00000509388 C17orf102A2RUQ5 167 aa16.58■□□□□ 0.24
RNF4-213ENST00000509388 RRN3P2A6NIE6 340 aa16.58■□□□□ 0.24
RNF4-213ENST00000509388 ZNF862O60290 1169 aa16.58■□□□□ 0.24
RNF4-213ENST00000509388 LYPLA2O95372 231 aa16.58■□□□□ 0.24
RNF4-213ENST00000509388 XRCC6P12956 609 aaKnown RBP eCLIP16.58■□□□□ 0.24
RNF4-213ENST00000509388 INSRRP14616 1297 aa16.58■□□□□ 0.24
RNF4-213ENST00000509388 ATP4AP20648 1035 aa16.58■□□□□ 0.24
RNF4-213ENST00000509388 IGBP1P78318 339 aa16.58■□□□□ 0.24
RNF4-213ENST00000509388 ZNF484Q5JVG2 852 aa16.58■□□□□ 0.24
RNF4-213ENST00000509388 AXDND1Q5T1B0 1012 aaPredicted RBP16.58■□□□□ 0.24
RNF4-213ENST00000509388 POTEGQ6S5H5 508 aa16.58■□□□□ 0.24
RNF4-213ENST00000509388 CCDC73Q6ZRK6 1079 aa16.58■□□□□ 0.24
RNF4-213ENST00000509388 KCTD17Q8N5Z5 321 aa16.58■□□□□ 0.24
RNF4-213ENST00000509388 PPP1R13LQ8WUF5 828 aa16.58■□□□□ 0.24
RNF4-213ENST00000509388 CEP170P1Q96L14 293 aa16.58■□□□□ 0.24
RNF4-213ENST00000509388 PLIN2Q99541 437 aa16.58■□□□□ 0.24
RNF4-213ENST00000509388 MMTAG2Q9BU76 263 aaKnown RBP16.58■□□□□ 0.24
RNF4-213ENST00000509388 DDX19AQ9NUU7 478 aaKnown RBP16.58■□□□□ 0.24
RNF4-213ENST00000509388 SETD4Q9NVD3 440 aa16.58■□□□□ 0.24
RNF4-213ENST00000509388 HDAC6Q9UBN7 1215 aa16.58■□□□□ 0.24
RNF4-213ENST00000509388 NRCAMQ92823 1304 aa16.58■□□□□ 0.24
RNF4-213ENST00000509388 MROH7Q68CQ1 1323 aa16.57■□□□□ 0.24
RNF4-213ENST00000509388 GOLGA6L22H0YM25 854 aa16.57■□□□□ 0.24
RNF4-213ENST00000509388 TLR3O15455 904 aaKnown RBP16.57■□□□□ 0.24
RNF4-213ENST00000509388 KARSQ15046 597 aaKnown RBP16.57■□□□□ 0.24
RNF4-213ENST00000509388 GRIK4Q16099 956 aa16.57■□□□□ 0.24
RNF4-213ENST00000509388 MTERF2Q49AM1 385 aa16.57■□□□□ 0.24
RNF4-213ENST00000509388 XKR9Q5GH70 373 aa16.57■□□□□ 0.24
RNF4-213ENST00000509388 RRAGBQ5VZM2 374 aa16.57■□□□□ 0.24
RNF4-213ENST00000509388 PIGOQ8TEQ8 1089 aa16.57■□□□□ 0.24
RNF4-213ENST00000509388 PANK2Q9BZ23 570 aa16.57■□□□□ 0.24
RNF4-213ENST00000509388 ANKEF1Q9NU02 776 aa16.57■□□□□ 0.24
RNF4-213ENST00000509388 WRAP73Q9P2S5 460 aaPredicted RBP16.57■□□□□ 0.24
RNF4-213ENST00000509388 GTF2IRD1Q9UHL9 959 aa16.57■□□□□ 0.24
RNF4-213ENST00000509388 GRIN2DO15399 1336 aa16.56■□□□□ 0.24
RNF4-213ENST00000509388 A0A087WWV3 80 aa16.56■□□□□ 0.24
RNF4-213ENST00000509388 PQBP1O60828 265 aaKnown RBP16.56■□□□□ 0.24
RNF4-213ENST00000509388 CMA1P23946 247 aa16.56■□□□□ 0.24
RNF4-213ENST00000509388 SHC4Q6S5L8 630 aa16.56■□□□□ 0.24
RNF4-213ENST00000509388 USP49Q70CQ1 688 aa16.56■□□□□ 0.24
RNF4-213ENST00000509388 ANO5Q75V66 913 aa16.56■□□□□ 0.24
RNF4-213ENST00000509388 SESTD1Q86VW0 696 aa16.56■□□□□ 0.24
RNF4-213ENST00000509388 PYM1Q9BRP8 204 aaKnown RBP16.56■□□□□ 0.24
RNF4-213ENST00000509388 NIFKQ9BYG3 293 aaKnown RBP16.56■□□□□ 0.24
RNF4-213ENST00000509388 ATP11BQ9Y2G3 1177 aa16.56■□□□□ 0.24
RNF4-213ENST00000509388 COL1A2P08123 1366 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 DOCK5Q9H7D0 1870 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 A0A1W2PQ27 194 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 A0A1W2PQ64 194 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 A0A1W2PQD8 194 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 ARHGEF35A5YM69 484 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 DCDC2CA8MYV0 355 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 E9PMD0 336 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 SSBP05455 408 aaKnown RBP eCLIP16.55■□□□□ 0.24
RNF4-213ENST00000509388 STAT6P42226 847 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 TBC1D8BQ0IIM8 1120 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 GRB10Q13322 594 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 ECM1Q16610 540 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 PTGISQ16647 500 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 HYIQ5T013 277 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 C1orf53Q5VUE5 145 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 RESP18Q5W5W9 173 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 PLA2G4FQ68DD2 849 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 EXOC8Q8IYI6 725 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 PDILTQ8N807 584 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 SLC43A3Q8NBI5 491 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms