RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 CNKSR3Q6P9H4 555 aa18.24■□□□□ 0.51
PDLIM5-212ENST00000509333 FAM161BQ96MY7 647 aa18.24■□□□□ 0.51
PDLIM5-212ENST00000509333 UNC45AQ9H3U1 944 aa18.24■□□□□ 0.51
PDLIM5-212ENST00000509333 GABBR1Q9UBS5 961 aa18.24■□□□□ 0.51
PDLIM5-212ENST00000509333 DDX25Q9UHL0 483 aaKnown RBP18.24■□□□□ 0.51
PDLIM5-212ENST00000509333 TMEM265A0A087WTH1 108 aa18.23■□□□□ 0.51
PDLIM5-212ENST00000509333 WDR64B1ANS9 1081 aa18.23■□□□□ 0.51
PDLIM5-212ENST00000509333 ZBTB42B2RXF5 422 aa18.23■□□□□ 0.51
PDLIM5-212ENST00000509333 SLC37A4O43826 429 aa18.23■□□□□ 0.51
PDLIM5-212ENST00000509333 ATP2A2P16615 1042 aaKnown RBP18.23■□□□□ 0.51
PDLIM5-212ENST00000509333 RABGGTBP53611 331 aa18.23■□□□□ 0.51
PDLIM5-212ENST00000509333 IKBKEQ14164 716 aa18.23■□□□□ 0.51
PDLIM5-212ENST00000509333 MTHFD1LQ6UB35 978 aa18.23■□□□□ 0.51
PDLIM5-212ENST00000509333 TIFAQ96CG3 184 aa18.23■□□□□ 0.51
PDLIM5-212ENST00000509333 FAM20AQ96MK3 541 aa18.23■□□□□ 0.51
PDLIM5-212ENST00000509333 GUCD1Q96NT3 240 aa18.23■□□□□ 0.51
PDLIM5-212ENST00000509333 TEKT3Q9BXF9 490 aa18.23■□□□□ 0.51
PDLIM5-212ENST00000509333 UPF2Q9HAU5 1272 aaKnown RBP18.23■□□□□ 0.51
PDLIM5-212ENST00000509333 KCNMB3Q9NPA1 279 aa18.23■□□□□ 0.51
PDLIM5-212ENST00000509333 MSRAQ9UJ68 235 aa18.23■□□□□ 0.51
PDLIM5-212ENST00000509333 YBX2Q9Y2T7 364 aaKnown RBP18.23■□□□□ 0.51
PDLIM5-212ENST00000509333 SAMM50Q9Y512 469 aa18.23■□□□□ 0.51
PDLIM5-212ENST00000509333 ZNF862O60290 1169 aa18.22■□□□□ 0.51
PDLIM5-212ENST00000509333 CTSHP09668 335 aa18.22■□□□□ 0.51
PDLIM5-212ENST00000509333 MYOGP15173 224 aa18.22■□□□□ 0.51
PDLIM5-212ENST00000509333 GCFC2P16383 781 aaKnown RBP18.22■□□□□ 0.51
PDLIM5-212ENST00000509333 SFNP31947 248 aa18.22■□□□□ 0.51
PDLIM5-212ENST00000509333 MGAT3Q09327 533 aa18.22■□□□□ 0.51
PDLIM5-212ENST00000509333 MKRN4PQ13434 485 aaPredicted RBP18.22■□□□□ 0.51
PDLIM5-212ENST00000509333 RAB30Q15771 203 aa18.22■□□□□ 0.51
PDLIM5-212ENST00000509333 DIS3L2Q8IYB7 885 aaKnown RBP18.22■□□□□ 0.51
PDLIM5-212ENST00000509333 NME8Q8N427 588 aa18.22■□□□□ 0.51
PDLIM5-212ENST00000509333 RDM1Q8NG50 284 aa18.22■□□□□ 0.51
PDLIM5-212ENST00000509333 BBXQ8WY36 941 aaPredicted RBP18.22■□□□□ 0.51
PDLIM5-212ENST00000509333 HAS1Q92839 578 aa18.22■□□□□ 0.51
PDLIM5-212ENST00000509333 TBC1D32Q96NH3 1257 aa18.22■□□□□ 0.51
PDLIM5-212ENST00000509333 ZNF576Q9H609 170 aa18.22■□□□□ 0.51
PDLIM5-212ENST00000509333 PCDHA11Q9Y5I1 949 aa18.22■□□□□ 0.51
PDLIM5-212ENST00000509333 SMIM35A0A1B0GVV1 85 aa18.21■□□□□ 0.51
PDLIM5-212ENST00000509333 CCNT1O60563 726 aaKnown RBP18.21■□□□□ 0.51
PDLIM5-212ENST00000509333 STBD1O95210 358 aa18.21■□□□□ 0.51
PDLIM5-212ENST00000509333 FOSBP53539 338 aa18.21■□□□□ 0.51
PDLIM5-212ENST00000509333 WDR5P61964 334 aaKnown RBP18.21■□□□□ 0.51
PDLIM5-212ENST00000509333 TRIM29Q14134 588 aa18.21■□□□□ 0.51
PDLIM5-212ENST00000509333 GRIN2CQ14957 1233 aa18.21■□□□□ 0.51
PDLIM5-212ENST00000509333 RSPH3Q86UC2 560 aa18.21■□□□□ 0.51
PDLIM5-212ENST00000509333 KIAA0319LQ8IZA0 1049 aa18.21■□□□□ 0.51
PDLIM5-212ENST00000509333 FBXO18Q8NFZ0 1043 aa18.21■□□□□ 0.51
PDLIM5-212ENST00000509333 SLC9A7Q96T83 725 aa18.21■□□□□ 0.51
PDLIM5-212ENST00000509333 CDX2Q99626 313 aaPredicted RBP18.21■□□□□ 0.51
PDLIM5-212ENST00000509333 NAP1L4Q99733 375 aaKnown RBP18.21■□□□□ 0.51
PDLIM5-212ENST00000509333 BACH2Q9BYV9 841 aa18.21■□□□□ 0.51
PDLIM5-212ENST00000509333 BRMS1Q9HCU9 246 aa18.21■□□□□ 0.51
PDLIM5-212ENST00000509333 NRBP2Q9NSY0 501 aa18.21■□□□□ 0.51
PDLIM5-212ENST00000509333 EML1O00423 815 aa18.2■□□□□ 0.5
PDLIM5-212ENST00000509333 TBX3O15119 743 aa18.2■□□□□ 0.5
PDLIM5-212ENST00000509333 ST18O60284 1047 aa18.2■□□□□ 0.5
PDLIM5-212ENST00000509333 CD2BP2O95400 341 aaKnown RBP18.2■□□□□ 0.5
PDLIM5-212ENST00000509333 RPLP2P05387 115 aaKnown RBP18.2■□□□□ 0.5
PDLIM5-212ENST00000509333 JAK3P52333 1124 aa18.2■□□□□ 0.5
PDLIM5-212ENST00000509333 HMGN5P82970 282 aaKnown RBP18.2■□□□□ 0.5
PDLIM5-212ENST00000509333 GUCY1B3Q02153 619 aa18.2■□□□□ 0.5
PDLIM5-212ENST00000509333 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.2■□□□□ 0.5
PDLIM5-212ENST00000509333 TRMT1LQ7Z2T5 733 aaKnown RBP18.2■□□□□ 0.5
PDLIM5-212ENST00000509333 MIER3Q7Z3K6 550 aa18.2■□□□□ 0.5
PDLIM5-212ENST00000509333 HERC6Q8IVU3 1022 aa18.2■□□□□ 0.5
PDLIM5-212ENST00000509333 CKAP2LQ8IYA6 745 aa18.2■□□□□ 0.5
PDLIM5-212ENST00000509333 SEPT8Q92599 483 aa18.2■□□□□ 0.5
PDLIM5-212ENST00000509333 FAM49AQ9H0Q0 323 aaPredicted RBP18.2■□□□□ 0.5
PDLIM5-212ENST00000509333 NKX2-4Q9H2Z4 354 aa18.2■□□□□ 0.5
PDLIM5-212ENST00000509333 TCEAL9Q9UHQ7 104 aa18.2■□□□□ 0.5
PDLIM5-212ENST00000509333 STXBP5LQ9Y2K9 1186 aa18.2■□□□□ 0.5
PDLIM5-212ENST00000509333 CHMP2AO43633 222 aa18.19■□□□□ 0.5
PDLIM5-212ENST00000509333 EFCAB14O75071 495 aa18.19■□□□□ 0.5
PDLIM5-212ENST00000509333 DEFB103AP81534 67 aa18.19■□□□□ 0.5
PDLIM5-212ENST00000509333 MRPS6P82932 125 aaKnown RBP18.19■□□□□ 0.5
PDLIM5-212ENST00000509333 LPIN1Q14693 890 aa18.19■□□□□ 0.5
PDLIM5-212ENST00000509333 UGCGQ16739 394 aa18.19■□□□□ 0.5
PDLIM5-212ENST00000509333 IER5Q5VY09 327 aa18.19■□□□□ 0.5
PDLIM5-212ENST00000509333 TMX3Q96JJ7 454 aa18.19■□□□□ 0.5
PDLIM5-212ENST00000509333 C8orf76Q96K31 380 aa18.19■□□□□ 0.5
PDLIM5-212ENST00000509333 NIFKQ9BYG3 293 aaKnown RBP18.19■□□□□ 0.5
PDLIM5-212ENST00000509333 VAV3Q9UKW4 847 aa18.19■□□□□ 0.5
PDLIM5-212ENST00000509333 GTF3C3Q9Y5Q9 886 aa18.19■□□□□ 0.5
PDLIM5-212ENST00000509333 CDY2AQ9Y6F7 541 aa18.19■□□□□ 0.5
PDLIM5-212ENST00000509333 COL1A2P08123 1366 aa18.18■□□□□ 0.5
PDLIM5-212ENST00000509333 KIF28PB7ZC32 967 aa18.18■□□□□ 0.5
PDLIM5-212ENST00000509333 WNT7AO00755 349 aa18.18■□□□□ 0.5
PDLIM5-212ENST00000509333 KCNJ6P48051 423 aa18.18■□□□□ 0.5
PDLIM5-212ENST00000509333 PPP2R5CQ13362 524 aa18.18■□□□□ 0.5
PDLIM5-212ENST00000509333 SAFBQ15424 915 aaKnown RBP eCLIP18.18■□□□□ 0.5
PDLIM5-212ENST00000509333 FBXO47Q5MNV8 452 aa18.18■□□□□ 0.5
PDLIM5-212ENST00000509333 TMCO2Q7Z6W1 182 aaPredicted RBP18.18■□□□□ 0.5
PDLIM5-212ENST00000509333 CELF4Q9BZC1 486 aaKnown RBP18.18■□□□□ 0.5
PDLIM5-212ENST00000509333 AGO3Q9H9G7 860 aaKnown RBP18.18■□□□□ 0.5
PDLIM5-212ENST00000509333 SLC28A3Q9HAS3 691 aa18.18■□□□□ 0.5
PDLIM5-212ENST00000509333 SQORQ9Y6N5 450 aa18.18■□□□□ 0.5
PDLIM5-212ENST00000509333 IGSF9BQ9UPX0 1349 aa18.18■□□□□ 0.5
PDLIM5-212ENST00000509333 MYH9P35579 1960 aaKnown RBP18.17■□□□□ 0.5
PDLIM5-212ENST00000509333 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms