RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 TRIM22Q8IYM9 498 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 PCSK9Q8NBP7 692 aaKnown RBP8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 TBCKQ8TEA7 893 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 GLT1D1Q96MS3 346 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 SPATA33Q96N06 139 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 MTG1Q9BT17 334 aaPredicted RBP8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 NOC4LQ9BVI4 516 aaKnown RBP8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 C6orf50Q9HD87 102 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 PRDM5Q9NQX1 630 aaPredicted RBP8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 COL6A3P12111 3177 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 SPTBN5Q9NRC6 3674 aaKnown RBP8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 ARID2Q68CP9 1835 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 IGKV6D-21A0A0A0MT36 114 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 BTBD18B2RXH4 712 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 DDX39AO00148 427 aaKnown RBP8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 LGR5O75473 907 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 FOSP01100 380 aaPredicted RBP8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 MMP1P03956 469 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 ATP4AP20648 1035 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 NLRP5P59047 1200 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 ADAM17P78536 824 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 SPIRE1Q08AE8 756 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 LAMC2Q13753 1193 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 KIAA0753Q2KHM9 967 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 GNPTABQ3T906 1256 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 C16orf59Q7L2K0 433 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 NIPA1Q7RTP0 329 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 SESTD1Q86VW0 696 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 CCDC60Q8IWA6 550 aaPredicted RBP8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 TEX2Q8IWB9 1127 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 RETREG2Q8NC44 543 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 BADQ92934 168 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 SENP7Q9BQF6 1050 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 PPP1R12CQ9BZL4 782 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 HDAC6Q9UBN7 1215 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 GTF2IRD1Q9UHL9 959 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 VAV3Q9UKW4 847 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 PCDHB3Q9Y5E6 796 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 NFASCO94856 1347 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 EMSYQ7Z589 1322 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 IGSF9BQ9UPX0 1349 aa8.2□□□□□ -1.1
TOPBP1-207ENST00000509162 CYP3A7-CYP3A51PA0A087WV96 503 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 POM121CA8CG34 1229 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 DDX11L8A8MPP1 907 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 ZBTB42B2RXF5 422 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 ACTN4O43707 911 aaKnown RBP8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 ZNF862O60290 1169 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 CDKL5O76039 1030 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 STBD1O95210 358 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 ATG7O95352 703 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 SMIM10L2AP0DMW4 78 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 SMIM10L2BP0DMW5 78 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 TGFB3P10600 412 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 CYP3A7P24462 503 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 CYP2C18P33260 490 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 TCF7P36402 384 aaPredicted RBP8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 GGCXP38435 758 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 ACTR2P61160 394 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 COPS2P61201 443 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 CUL4AQ13619 759 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 PRR16Q569H4 304 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 MARCH8Q5T0T0 291 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 UTP14CQ5TAP6 766 aaKnown RBP8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 FAM109BQ6ICB4 259 aaPredicted RBP8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 RUFY4Q6ZNE9 571 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 PIK3AP1Q6ZUJ8 805 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 PLA2G4DQ86XP0 818 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 DIS3L2Q8IYB7 885 aaKnown RBP8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 CCDC12Q8WUD4 166 aaPredicted RBP8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 LMBR1Q8WVP7 490 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 TRAPPC12Q8WVT3 735 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 HAS1Q92839 578 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 SLC5A5Q92911 643 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 SCLYQ96I15 445 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 TOX2Q96NM4 488 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 MPHOSPH6Q99547 160 aaKnown RBP8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 TMEM60Q9H2L4 133 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 UNC45AQ9H3U1 944 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 RNPEPQ9H4A4 650 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 SPC25Q9HBM1 224 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 JPH1Q9HDC5 661 aaPredicted RBP8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 KCNMB3Q9NPA1 279 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 SH2B1Q9NRF2 756 aaPredicted RBP8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 WRAP73Q9P2S5 460 aaPredicted RBP8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 PRUNE2Q8WUY3 3088 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 GBF1Q92538 1859 aa8.19□□□□□ -1.1
TOPBP1-207ENST00000509162 TMEM150BA6NC51 233 aa8.18□□□□□ -1.1
TOPBP1-207ENST00000509162 B4DLN1 442 aa8.18□□□□□ -1.1
TOPBP1-207ENST00000509162 EML1O00423 815 aa8.18□□□□□ -1.1
TOPBP1-207ENST00000509162 PSMD10O75832 226 aa8.18□□□□□ -1.1
TOPBP1-207ENST00000509162 CABYRO75952 493 aa8.18□□□□□ -1.1
TOPBP1-207ENST00000509162 MARK3P27448 753 aa8.18□□□□□ -1.1
TOPBP1-207ENST00000509162 GNA11P29992 359 aa8.18□□□□□ -1.1
TOPBP1-207ENST00000509162 FXR1P51114 621 aaKnown RBP eCLIP8.18□□□□□ -1.1
TOPBP1-207ENST00000509162 AKAP17AQ02040 695 aaKnown RBP8.18□□□□□ -1.1
TOPBP1-207ENST00000509162 RBL2Q08999 1139 aa8.18□□□□□ -1.1
TOPBP1-207ENST00000509162 NEDD9Q14511 834 aa8.18□□□□□ -1.1
TOPBP1-207ENST00000509162 NONOQ15233 471 aaKnown RBP eCLIP8.18□□□□□ -1.1
TOPBP1-207ENST00000509162 DGKDQ16760 1214 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms