RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 NFRKBQ6P4R8 1299 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 DTHD1Q6ZMT9 781 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 ANO5Q75V66 913 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 ANKRD33Q7Z3H0 272 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 CATSPER3Q86XQ3 398 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 ATP8B4Q8TF62 1192 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 TRAPPC12Q8WVT3 735 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 GLG1Q92896 1179 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 WNT8BQ93098 351 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 ZNF396Q96N95 335 aaPredicted RBP11.62□□□□□ -0.55
PTPN20-220ENST00000508715 PNMA5Q96PV4 448 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 SH2D3AQ9BRG2 576 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 LXNQ9BS40 222 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 TRPV6Q9H1D0 765 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 TRMT13Q9NUP7 481 aaKnown RBP11.62□□□□□ -0.55
PTPN20-220ENST00000508715 SETD4Q9NVD3 440 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 ERAP1Q9NZ08 941 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 GTF2IRD1Q9UHL9 959 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 SAMM50Q9Y512 469 aa11.62□□□□□ -0.55
PTPN20-220ENST00000508715 SRPRBQ9Y5M8 271 aaKnown RBP11.62□□□□□ -0.55
PTPN20-220ENST00000508715 POTEB3A0JP26 581 aa11.61□□□□□ -0.55
PTPN20-220ENST00000508715 SPTLC2O15270 562 aa11.61□□□□□ -0.55
PTPN20-220ENST00000508715 YEATS4O95619 227 aa11.61□□□□□ -0.55
PTPN20-220ENST00000508715 BMP15O95972 392 aa11.61□□□□□ -0.55
PTPN20-220ENST00000508715 P4HBP07237 508 aaKnown RBP11.61□□□□□ -0.55
PTPN20-220ENST00000508715 INSRRP14616 1297 aa11.61□□□□□ -0.55
PTPN20-220ENST00000508715 QARSP47897 775 aaKnown RBP11.61□□□□□ -0.55
PTPN20-220ENST00000508715 FAAP100Q0VG06 881 aa11.61□□□□□ -0.55
PTPN20-220ENST00000508715 TARBP2Q15633 366 aaKnown RBP11.61□□□□□ -0.55
PTPN20-220ENST00000508715 SPECC1Q5M775 1068 aa11.61□□□□□ -0.55
PTPN20-220ENST00000508715 POTEBQ6S5H4 581 aa11.61□□□□□ -0.55
PTPN20-220ENST00000508715 TRMT1LQ7Z2T5 733 aaKnown RBP11.61□□□□□ -0.55
PTPN20-220ENST00000508715 KCNK18Q7Z418 384 aa11.61□□□□□ -0.55
PTPN20-220ENST00000508715 SH3RF1Q7Z6J0 888 aa11.61□□□□□ -0.55
PTPN20-220ENST00000508715 LEO1Q8WVC0 666 aaPredicted RBP11.61□□□□□ -0.55
PTPN20-220ENST00000508715 LMBR1Q8WVP7 490 aa11.61□□□□□ -0.55
PTPN20-220ENST00000508715 DHX38Q92620 1227 aaKnown RBP11.61□□□□□ -0.55
PTPN20-220ENST00000508715 VTI1AQ96AJ9 217 aa11.61□□□□□ -0.55
PTPN20-220ENST00000508715 POLR3CQ9BUI4 534 aaPredicted RBP11.61□□□□□ -0.55
PTPN20-220ENST00000508715 CSRNP2Q9H175 543 aa11.61□□□□□ -0.55
PTPN20-220ENST00000508715 AZI2Q9H6S1 392 aa11.61□□□□□ -0.55
PTPN20-220ENST00000508715 GDPD2Q9HCC8 539 aa11.61□□□□□ -0.55
PTPN20-220ENST00000508715 CHMP5Q9NZZ3 219 aa11.61□□□□□ -0.55
PTPN20-220ENST00000508715 LRWD1Q9UFC0 647 aa11.61□□□□□ -0.55
PTPN20-220ENST00000508715 TANC1Q9C0D5 1861 aa11.61□□□□□ -0.55
PTPN20-220ENST00000508715 MBLAC1A4D2B0 266 aaPredicted RBP11.6□□□□□ -0.55
PTPN20-220ENST00000508715 TREHO43280 583 aa11.6□□□□□ -0.55
PTPN20-220ENST00000508715 PPP6R2O75170 966 aa11.6□□□□□ -0.55
PTPN20-220ENST00000508715 LYPLA2O95372 231 aa11.6□□□□□ -0.55
PTPN20-220ENST00000508715 ITGB8P26012 769 aa11.6□□□□□ -0.55
PTPN20-220ENST00000508715 RPA1P27694 616 aa11.6□□□□□ -0.55
PTPN20-220ENST00000508715 SLC26A2P50443 739 aa11.6□□□□□ -0.55
PTPN20-220ENST00000508715 NPEPPSP55786 919 aa11.6□□□□□ -0.55
PTPN20-220ENST00000508715 PSMC5P62195 406 aa11.6□□□□□ -0.55
PTPN20-220ENST00000508715 PTPN11Q06124 597 aaPredicted RBP11.6□□□□□ -0.55
PTPN20-220ENST00000508715 GRB10Q13322 594 aa11.6□□□□□ -0.55
PTPN20-220ENST00000508715 STK38Q15208 465 aa11.6□□□□□ -0.55
PTPN20-220ENST00000508715 TRIM71Q2Q1W2 868 aaKnown RBP11.6□□□□□ -0.55
PTPN20-220ENST00000508715 HYIQ5T013 277 aa11.6□□□□□ -0.55
PTPN20-220ENST00000508715 FAM160B1Q5W0V3 765 aa11.6□□□□□ -0.55
PTPN20-220ENST00000508715 ATL3Q6DD88 541 aa11.6□□□□□ -0.55
PTPN20-220ENST00000508715 POTEGQ6S5H5 508 aa11.6□□□□□ -0.55
PTPN20-220ENST00000508715 TPH2Q8IWU9 490 aa11.6□□□□□ -0.55
PTPN20-220ENST00000508715 C4orf19Q8IY42 314 aa11.6□□□□□ -0.55
PTPN20-220ENST00000508715 EPSTI1Q96J88 318 aa11.6□□□□□ -0.55
PTPN20-220ENST00000508715 TOX2Q96NM4 488 aa11.6□□□□□ -0.55
PTPN20-220ENST00000508715 KATNAL1Q9BW62 490 aa11.6□□□□□ -0.55
PTPN20-220ENST00000508715 NIFKQ9BYG3 293 aaKnown RBP11.6□□□□□ -0.55
PTPN20-220ENST00000508715 ZNF215Q9UL58 517 aaPredicted RBP11.6□□□□□ -0.55
PTPN20-220ENST00000508715 PCDHA7Q9UN72 937 aa11.6□□□□□ -0.55
PTPN20-220ENST00000508715 CEP131Q9UPN4 1083 aa11.6□□□□□ -0.55
PTPN20-220ENST00000508715 A0A087X0B3 334 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 TRIM43BA6NCK2 446 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 HBP1O60381 514 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 PQBP1O60828 265 aaKnown RBP11.59□□□□□ -0.55
PTPN20-220ENST00000508715 OATP04181 439 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 CYP2C9P11712 490 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 LONP1P36776 959 aaKnown RBP11.59□□□□□ -0.55
PTPN20-220ENST00000508715 PPFIA1Q13136 1202 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 GRIK4Q16099 956 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 TMEM266Q2M3C6 531 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 TMEM119Q4V9L6 283 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 FAM47CQ5HY64 1035 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 PLA2G4FQ68DD2 849 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 SHC4Q6S5L8 630 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 RUFY4Q6ZNE9 571 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 LINC01465Q8N7H1 131 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 PIGOQ8TEQ8 1089 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 BBXQ8WY36 941 aaPredicted RBP11.59□□□□□ -0.55
PTPN20-220ENST00000508715 TNPO1Q92973 898 aaKnown RBP11.59□□□□□ -0.55
PTPN20-220ENST00000508715 TRIM43Q96BQ3 446 aaPredicted RBP11.59□□□□□ -0.55
PTPN20-220ENST00000508715 VWCEQ96DN2 955 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 ZSWIM4Q9H7M6 989 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 TUFT1Q9NNX1 390 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 PDLIM7Q9NR12 457 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 TBX21Q9UL17 535 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 ATP11BQ9Y2G3 1177 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 UMODL1Q5DID0 1318 aa11.59□□□□□ -0.55
PTPN20-220ENST00000508715 C22orf31O95567 290 aa11.58□□□□□ -0.56
PTPN20-220ENST00000508715 CCT6AP40227 531 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms