RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 AMNQ9BXJ7 453 aa6.99□□□□□ -1.29
UBE2D3-225ENST00000508476 KRTAP4-2Q9BYR5 136 aa6.99□□□□□ -1.29
UBE2D3-225ENST00000508476 KRTAP3-1Q9BYR8 98 aa6.99□□□□□ -1.29
UBE2D3-225ENST00000508476 KATNBL1Q9H079 304 aa6.99□□□□□ -1.29
UBE2D3-225ENST00000508476 INCENPQ9NQS7 918 aa6.99□□□□□ -1.29
UBE2D3-225ENST00000508476 SMPD4Q9NXE4 827 aa6.99□□□□□ -1.29
UBE2D3-225ENST00000508476 ST6GALNAC2Q9UJ37 374 aa6.99□□□□□ -1.29
UBE2D3-225ENST00000508476 CNOT11Q9UKZ1 510 aaKnown RBP6.99□□□□□ -1.29
UBE2D3-225ENST00000508476 GPR42O15529 346 aa6.98□□□□□ -1.29
UBE2D3-225ENST00000508476 DNAJC8O75937 253 aaPredicted RBP6.98□□□□□ -1.29
UBE2D3-225ENST00000508476 CNOT4O95628 575 aaKnown RBP6.98□□□□□ -1.29
UBE2D3-225ENST00000508476 ADCY8P40145 1251 aa6.98□□□□□ -1.29
UBE2D3-225ENST00000508476 MAGEA10P43363 369 aaPredicted RBP6.98□□□□□ -1.29
UBE2D3-225ENST00000508476 EPHB4P54760 987 aa6.98□□□□□ -1.29
UBE2D3-225ENST00000508476 GLB1LQ6UWU2 654 aa6.98□□□□□ -1.29
UBE2D3-225ENST00000508476 ASB15Q8WXK1 588 aa6.98□□□□□ -1.29
UBE2D3-225ENST00000508476 DLG3Q92796 817 aa6.98□□□□□ -1.29
UBE2D3-225ENST00000508476 C8orf49Q96NF6 230 aa6.98□□□□□ -1.29
UBE2D3-225ENST00000508476 MEGF9Q9H1U4 602 aa6.98□□□□□ -1.29
UBE2D3-225ENST00000508476 JADE2Q9NQC1 790 aa6.98□□□□□ -1.29
UBE2D3-225ENST00000508476 KCNH7Q9NS40 1196 aa6.98□□□□□ -1.29
UBE2D3-225ENST00000508476 GALNT8Q9NY28 637 aa6.98□□□□□ -1.29
UBE2D3-225ENST00000508476 B3GALT1Q9Y5Z6 326 aa6.98□□□□□ -1.29
UBE2D3-225ENST00000508476 SLC12A8A0AV02 714 aa6.97□□□□□ -1.29
UBE2D3-225ENST00000508476 NPEPPSL1A6NEC2 478 aa6.97□□□□□ -1.29
UBE2D3-225ENST00000508476 GLRX3O76003 335 aaKnown RBP6.97□□□□□ -1.29
UBE2D3-225ENST00000508476 ZBTB48P10074 688 aaPredicted RBP6.97□□□□□ -1.29
UBE2D3-225ENST00000508476 HERVK_113P62684 666 aa6.97□□□□□ -1.29
UBE2D3-225ENST00000508476 ADAM17P78536 824 aa6.97□□□□□ -1.29
UBE2D3-225ENST00000508476 TOP3AQ13472 1001 aaPredicted RBP6.97□□□□□ -1.29
UBE2D3-225ENST00000508476 ICAM4Q14773 271 aa6.97□□□□□ -1.29
UBE2D3-225ENST00000508476 TMEM132BQ14DG7 1078 aa6.97□□□□□ -1.29
UBE2D3-225ENST00000508476 SURF1Q15526 300 aa6.97□□□□□ -1.29
UBE2D3-225ENST00000508476 WDR72Q3MJ13 1102 aa6.97□□□□□ -1.29
UBE2D3-225ENST00000508476 GGNQ86UU5 652 aa6.97□□□□□ -1.29
UBE2D3-225ENST00000508476 C2orf69Q8N8R5 385 aa6.97□□□□□ -1.29
UBE2D3-225ENST00000508476 KRTAP4-11Q9BYQ6 195 aa6.97□□□□□ -1.29
UBE2D3-225ENST00000508476 TNPO3Q9Y5L0 923 aaKnown RBP6.97□□□□□ -1.29
UBE2D3-225ENST00000508476 M0R2C6 588 aa6.96□□□□□ -1.3
UBE2D3-225ENST00000508476 KRT37O76014 449 aa6.96□□□□□ -1.3
UBE2D3-225ENST00000508476 APPP05067 770 aa6.96□□□□□ -1.3
UBE2D3-225ENST00000508476 SDSP20132 328 aa6.96□□□□□ -1.3
UBE2D3-225ENST00000508476 POLD1P28340 1107 aa6.96□□□□□ -1.3
UBE2D3-225ENST00000508476 FNDC3BQ53EP0 1204 aaKnown RBP6.96□□□□□ -1.3
UBE2D3-225ENST00000508476 CATSPEREQ5SY80 951 aa6.96□□□□□ -1.3
UBE2D3-225ENST00000508476 NPM2Q86SE8 214 aaKnown RBP6.96□□□□□ -1.3
UBE2D3-225ENST00000508476 SAMD11Q96NU1 681 aa6.96□□□□□ -1.3
UBE2D3-225ENST00000508476 GBP4Q96PP9 640 aa6.96□□□□□ -1.3
UBE2D3-225ENST00000508476 SAMD15Q9P1V8 674 aa6.96□□□□□ -1.3
UBE2D3-225ENST00000508476 CDC42EP3Q9UKI2 254 aa6.96□□□□□ -1.3
UBE2D3-225ENST00000508476 PRAMEF22A3QJZ6 481 aa6.95□□□□□ -1.3
UBE2D3-225ENST00000508476 FOXP2O15409 715 aa6.95□□□□□ -1.3
UBE2D3-225ENST00000508476 ASMTLO95671 621 aa6.95□□□□□ -1.3
UBE2D3-225ENST00000508476 MECP2P51608 486 aaKnown RBP6.95□□□□□ -1.3
UBE2D3-225ENST00000508476 RRADP55042 308 aa6.95□□□□□ -1.3
UBE2D3-225ENST00000508476 IRF9Q00978 393 aa6.95□□□□□ -1.3
UBE2D3-225ENST00000508476 NOLC1Q14978 699 aaKnown RBP eCLIP6.95□□□□□ -1.3
UBE2D3-225ENST00000508476 ZCCHC8Q6NZY4 707 aaKnown RBP6.95□□□□□ -1.3
UBE2D3-225ENST00000508476 DPP8Q6V1X1 898 aaPredicted RBP6.95□□□□□ -1.3
UBE2D3-225ENST00000508476 REXO1L1PQ8IX06 675 aa6.95□□□□□ -1.3
UBE2D3-225ENST00000508476 GNRHR2Q96P88 292 aa6.95□□□□□ -1.3
UBE2D3-225ENST00000508476 TMEM260Q9NX78 707 aa6.95□□□□□ -1.3
UBE2D3-225ENST00000508476 SLC4A7Q9Y6M7 1214 aa6.95□□□□□ -1.3
UBE2D3-225ENST00000508476 DVL2O14641 736 aa6.94□□□□□ -1.3
UBE2D3-225ENST00000508476 OPA1O60313 960 aa6.94□□□□□ -1.3
UBE2D3-225ENST00000508476 IGFALSP35858 605 aa6.94□□□□□ -1.3
UBE2D3-225ENST00000508476 ECE1P42892 770 aa6.94□□□□□ -1.3
UBE2D3-225ENST00000508476 KCNQ1P51787 676 aa6.94□□□□□ -1.3
UBE2D3-225ENST00000508476 CD83Q01151 205 aa6.94□□□□□ -1.3
UBE2D3-225ENST00000508476 USP10Q14694 798 aaKnown RBP6.94□□□□□ -1.3
UBE2D3-225ENST00000508476 STILQ15468 1287 aa6.94□□□□□ -1.3
UBE2D3-225ENST00000508476 C21orf62-AS1Q17RA5 79 aa6.94□□□□□ -1.3
UBE2D3-225ENST00000508476 KANK2Q63ZY3 851 aa6.94□□□□□ -1.3
UBE2D3-225ENST00000508476 SLFN13Q68D06 897 aa6.94□□□□□ -1.3
UBE2D3-225ENST00000508476 LARP4Q71RC2 724 aaKnown RBP eCLIP6.94□□□□□ -1.3
UBE2D3-225ENST00000508476 OTOP1Q7RTM1 612 aa6.94□□□□□ -1.3
UBE2D3-225ENST00000508476 HIPK4Q8NE63 616 aa6.94□□□□□ -1.3
UBE2D3-225ENST00000508476 ERCC4Q92889 916 aaPredicted RBP6.94□□□□□ -1.3
UBE2D3-225ENST00000508476 WNK4Q96J92 1243 aa6.94□□□□□ -1.3
UBE2D3-225ENST00000508476 RNPC3Q96LT9 517 aaKnown RBP6.94□□□□□ -1.3
UBE2D3-225ENST00000508476 LRRC37BQ96QE4 947 aa6.94□□□□□ -1.3
UBE2D3-225ENST00000508476 CARD11Q9BXL7 1154 aa6.94□□□□□ -1.3
UBE2D3-225ENST00000508476 NPTXRO95502 500 aa6.93□□□□□ -1.3
UBE2D3-225ENST00000508476 INSRRP14616 1297 aa6.93□□□□□ -1.3
UBE2D3-225ENST00000508476 ZNF20P17024 532 aa6.93□□□□□ -1.3
UBE2D3-225ENST00000508476 DDX53Q86TM3 631 aaKnown RBP6.93□□□□□ -1.3
UBE2D3-225ENST00000508476 CIR1Q86X95 450 aaPredicted RBP6.93□□□□□ -1.3
UBE2D3-225ENST00000508476 BOCQ9BWV1 1114 aa6.93□□□□□ -1.3
UBE2D3-225ENST00000508476 BTBD2Q9BX70 525 aa6.93□□□□□ -1.3
UBE2D3-225ENST00000508476 ZDHHC5Q9C0B5 715 aa6.93□□□□□ -1.3
UBE2D3-225ENST00000508476 KIAA1683Q9H0B3 1180 aa6.93□□□□□ -1.3
UBE2D3-225ENST00000508476 OR10A5Q9H207 317 aa6.93□□□□□ -1.3
UBE2D3-225ENST00000508476 CD248Q9HCU0 757 aa6.93□□□□□ -1.3
UBE2D3-225ENST00000508476 JAG2Q9Y219 1238 aa6.93□□□□□ -1.3
UBE2D3-225ENST00000508476 TRAF5O00463 557 aa6.92□□□□□ -1.3
UBE2D3-225ENST00000508476 CUTAO60888 179 aa6.92□□□□□ -1.3
UBE2D3-225ENST00000508476 HIP1RO75146 1068 aa6.92□□□□□ -1.3
UBE2D3-225ENST00000508476 ASLP04424 464 aa6.92□□□□□ -1.3
UBE2D3-225ENST00000508476 SDHAP31040 664 aa6.92□□□□□ -1.3
UBE2D3-225ENST00000508476 ETV4P43268 484 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms