RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 EVCP57679 992 aa23.68■■□□□ 1.38
CLDND1-216ENST00000507944 CCT2P78371 535 aaKnown RBP23.68■■□□□ 1.38
CLDND1-216ENST00000507944 TSHZ1Q6ZSZ6 1077 aa23.68■■□□□ 1.38
CLDND1-216ENST00000507944 RNF26Q9BY78 433 aaPredicted RBP23.68■■□□□ 1.38
CLDND1-216ENST00000507944 LOXHD1Q8IVV2 1947 aa23.68■■□□□ 1.38
CLDND1-216ENST00000507944 MYH9P35579 1960 aaKnown RBP23.67■■□□□ 1.38
CLDND1-216ENST00000507944 IPO5O00410 1097 aaKnown RBP23.67■■□□□ 1.38
CLDND1-216ENST00000507944 EPB41L2O43491 1005 aaKnown RBP23.67■■□□□ 1.38
CLDND1-216ENST00000507944 IFNAR1P17181 557 aa23.67■■□□□ 1.38
CLDND1-216ENST00000507944 EPC2Q52LR7 807 aa23.67■■□□□ 1.38
CLDND1-216ENST00000507944 FAM160B1Q5W0V3 765 aa23.67■■□□□ 1.38
CLDND1-216ENST00000507944 RUFY3Q7L099 469 aa23.67■■□□□ 1.38
CLDND1-216ENST00000507944 IL17RAQ96F46 866 aa23.67■■□□□ 1.38
CLDND1-216ENST00000507944 UIMC1Q96RL1 719 aa23.67■■□□□ 1.38
CLDND1-216ENST00000507944 SLC26A6Q9BXS9 759 aa23.67■■□□□ 1.38
CLDND1-216ENST00000507944 EVPLQ92817 2033 aa23.67■■□□□ 1.38
CLDND1-216ENST00000507944 M0QZ92 97 aa23.66■■□□□ 1.38
CLDND1-216ENST00000507944 MIS18BP1Q6P0N0 1132 aa23.66■■□□□ 1.38
CLDND1-216ENST00000507944 MTHFD1LQ6UB35 978 aa23.66■■□□□ 1.38
CLDND1-216ENST00000507944 BICD2Q8TD16 824 aa23.66■■□□□ 1.38
CLDND1-216ENST00000507944 ZNF577Q9BSK1 485 aa23.66■■□□□ 1.38
CLDND1-216ENST00000507944 AGO3Q9H9G7 860 aaKnown RBP23.66■■□□□ 1.38
CLDND1-216ENST00000507944 NCOA5Q9HCD5 579 aaKnown RBP23.66■■□□□ 1.38
CLDND1-216ENST00000507944 ZSWIM6Q9HCJ5 1215 aa23.66■■□□□ 1.38
CLDND1-216ENST00000507944 ZNF302Q9NR11 478 aa23.66■■□□□ 1.38
CLDND1-216ENST00000507944 TBC1D22BQ9NU19 505 aa23.66■■□□□ 1.38
CLDND1-216ENST00000507944 TRPV2Q9Y5S1 764 aa23.66■■□□□ 1.38
CLDND1-216ENST00000507944 SQORQ9Y6N5 450 aa23.66■■□□□ 1.38
CLDND1-216ENST00000507944 SMIM35A0A1B0GVV1 85 aa23.65■■□□□ 1.38
CLDND1-216ENST00000507944 HBP1O60381 514 aa23.65■■□□□ 1.38
CLDND1-216ENST00000507944 CD52P31358 61 aa23.65■■□□□ 1.38
CLDND1-216ENST00000507944 SETQ01105 290 aaPredicted RBP23.65■■□□□ 1.38
CLDND1-216ENST00000507944 TMEM62Q0P6H9 643 aa23.65■■□□□ 1.38
CLDND1-216ENST00000507944 SWSAP1Q6NVH7 229 aa23.65■■□□□ 1.38
CLDND1-216ENST00000507944 CCDC60Q8IWA6 550 aaPredicted RBP23.65■■□□□ 1.38
CLDND1-216ENST00000507944 TMEM192Q8IY95 271 aa23.65■■□□□ 1.38
CLDND1-216ENST00000507944 NME8Q8N427 588 aa23.65■■□□□ 1.38
CLDND1-216ENST00000507944 CCDC148Q8NFR7 591 aa23.65■■□□□ 1.38
CLDND1-216ENST00000507944 RASGRP4Q8TDF6 673 aa23.65■■□□□ 1.38
CLDND1-216ENST00000507944 ATP8B4Q8TF62 1192 aa23.65■■□□□ 1.38
CLDND1-216ENST00000507944 MUC3AQ02505 3323 aa23.64■■□□□ 1.38
CLDND1-216ENST00000507944 NLRC5Q86WI3 1866 aa23.64■■□□□ 1.38
CLDND1-216ENST00000507944 KLRC1P26715 233 aa23.64■■□□□ 1.37
CLDND1-216ENST00000507944 TOB2Q14106 344 aaPredicted RBP23.64■■□□□ 1.37
CLDND1-216ENST00000507944 PRR16Q569H4 304 aa23.64■■□□□ 1.37
CLDND1-216ENST00000507944 PDXDC2PQ6P474 469 aa23.64■■□□□ 1.37
CLDND1-216ENST00000507944 FIBCD1Q8N539 461 aa23.64■■□□□ 1.37
CLDND1-216ENST00000507944 NECAB3Q96P71 396 aaPredicted RBP23.64■■□□□ 1.37
CLDND1-216ENST00000507944 CELF4Q9BZC1 486 aaKnown RBP23.64■■□□□ 1.37
CLDND1-216ENST00000507944 VPS54Q9P1Q0 977 aa23.64■■□□□ 1.37
CLDND1-216ENST00000507944 CYP46A1Q9Y6A2 500 aa23.64■■□□□ 1.37
CLDND1-216ENST00000507944 H3BNC9 293 aa23.63■■□□□ 1.37
CLDND1-216ENST00000507944 CIITAP33076 1130 aa23.63■■□□□ 1.37
CLDND1-216ENST00000507944 GPM6BQ13491 265 aa23.63■■□□□ 1.37
CLDND1-216ENST00000507944 PTPROQ16827 1216 aa23.63■■□□□ 1.37
CLDND1-216ENST00000507944 ZNF746Q6NUN9 644 aaPredicted RBP23.63■■□□□ 1.37
CLDND1-216ENST00000507944 MRPL38Q96DV4 380 aaKnown RBP23.63■■□□□ 1.37
CLDND1-216ENST00000507944 BDP1A6H8Y1 2624 aa23.62■■□□□ 1.37
CLDND1-216ENST00000507944 NEFLP07196 543 aa23.62■■□□□ 1.37
CLDND1-216ENST00000507944 KRT76Q01546 638 aa23.62■■□□□ 1.37
CLDND1-216ENST00000507944 ZNF484Q5JVG2 852 aa23.62■■□□□ 1.37
CLDND1-216ENST00000507944 RTN4RL1Q86UN2 441 aaPredicted RBP23.62■■□□□ 1.37
CLDND1-216ENST00000507944 FTHL17Q9BXU8 183 aa23.62■■□□□ 1.37
CLDND1-216ENST00000507944 SH3GLB2Q9NR46 395 aa23.62■■□□□ 1.37
CLDND1-216ENST00000507944 PADI3Q9ULW8 664 aa23.62■■□□□ 1.37
CLDND1-216ENST00000507944 COL4A6Q14031 1691 aa23.62■■□□□ 1.37
CLDND1-216ENST00000507944 COL1A2P08123 1366 aa23.62■■□□□ 1.37
CLDND1-216ENST00000507944 IGSF9BQ9UPX0 1349 aa23.61■■□□□ 1.37
CLDND1-216ENST00000507944 KDM3AQ9Y4C1 1321 aa23.61■■□□□ 1.37
CLDND1-216ENST00000507944 ATP4AP20648 1035 aa23.61■■□□□ 1.37
CLDND1-216ENST00000507944 NLRP5P59047 1200 aa23.61■■□□□ 1.37
CLDND1-216ENST00000507944 SSRP1Q08945 709 aaKnown RBP23.61■■□□□ 1.37
CLDND1-216ENST00000507944 CKAP2LQ8IYA6 745 aa23.61■■□□□ 1.37
CLDND1-216ENST00000507944 SMAP1Q8IYB5 467 aaPredicted RBP23.61■■□□□ 1.37
CLDND1-216ENST00000507944 TRIM22Q8IYM9 498 aa23.61■■□□□ 1.37
CLDND1-216ENST00000507944 ZNF274Q96GC6 653 aaPredicted RBP23.61■■□□□ 1.37
CLDND1-216ENST00000507944 TM6SF1Q9BZW5 370 aa23.61■■□□□ 1.37
CLDND1-216ENST00000507944 TCEAL9Q9UHQ7 104 aa23.61■■□□□ 1.37
CLDND1-216ENST00000507944 MAFBQ9Y5Q3 323 aaPredicted RBP23.61■■□□□ 1.37
CLDND1-216ENST00000507944 XIRP2A4UGR9 3374 aa23.61■■□□□ 1.37
CLDND1-216ENST00000507944 RALGAPA2Q2PPJ7 1873 aa23.6■■□□□ 1.37
CLDND1-216ENST00000507944 PSAPP07602 524 aa23.6■■□□□ 1.37
CLDND1-216ENST00000507944 PAK2Q13177 524 aa23.6■■□□□ 1.37
CLDND1-216ENST00000507944 KIAA0319LQ8IZA0 1049 aa23.6■■□□□ 1.37
CLDND1-216ENST00000507944 LINC01599Q8WXQ3 324 aa23.6■■□□□ 1.37
CLDND1-216ENST00000507944 ZNF689Q96CS4 500 aaPredicted RBP23.6■■□□□ 1.37
CLDND1-216ENST00000507944 LARP6Q9BRS8 491 aaKnown RBP23.6■■□□□ 1.37
CLDND1-216ENST00000507944 RC3H2Q9HBD1 1191 aaKnown RBP23.6■■□□□ 1.37
CLDND1-216ENST00000507944 PCDHA10Q9Y5I2 948 aa23.6■■□□□ 1.37
CLDND1-216ENST00000507944 ADGRA3Q8IWK6 1321 aa23.59■■□□□ 1.37
CLDND1-216ENST00000507944 WDR81Q562E7 1941 aa23.59■■□□□ 1.37
CLDND1-216ENST00000507944 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.59■■□□□ 1.37
CLDND1-216ENST00000507944 ZBTB42B2RXF5 422 aa23.59■■□□□ 1.37
CLDND1-216ENST00000507944 CPLX1O14810 134 aa23.59■■□□□ 1.37
CLDND1-216ENST00000507944 EDIL3O43854 480 aa23.59■■□□□ 1.37
CLDND1-216ENST00000507944 DGKIO75912 1065 aa23.59■■□□□ 1.37
CLDND1-216ENST00000507944 CTNNB1P35222 781 aa23.59■■□□□ 1.37
CLDND1-216ENST00000507944 BMPR1AP36894 532 aa23.59■■□□□ 1.37
CLDND1-216ENST00000507944 USP11P51784 963 aa23.59■■□□□ 1.37
CLDND1-216ENST00000507944 BBXQ8WY36 941 aaPredicted RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms