RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 GOLGA6L22H0YM25 854 aa22.46■■□□□ 1.19
USP53-203ENST00000507597 ARVCFO00192 962 aa22.46■■□□□ 1.19
USP53-203ENST00000507597 TLR3O15455 904 aaKnown RBP22.46■■□□□ 1.19
USP53-203ENST00000507597 COL6A1P12109 1028 aa22.46■■□□□ 1.19
USP53-203ENST00000507597 MARK3P27448 753 aa22.46■■□□□ 1.19
USP53-203ENST00000507597 PRKCEQ02156 737 aa22.46■■□□□ 1.19
USP53-203ENST00000507597 CYP4A11Q02928 519 aa22.46■■□□□ 1.19
USP53-203ENST00000507597 NBPF20Q3BBV1 942 aa22.46■■□□□ 1.19
USP53-203ENST00000507597 FAM47CQ5HY64 1035 aa22.46■■□□□ 1.19
USP53-203ENST00000507597 ADALQ6DHV7 355 aa22.46■■□□□ 1.19
USP53-203ENST00000507597 SESTD1Q86VW0 696 aa22.46■■□□□ 1.19
USP53-203ENST00000507597 TRIM50Q86XT4 487 aa22.46■■□□□ 1.19
USP53-203ENST00000507597 JPH2Q9BR39 696 aaPredicted RBP22.46■■□□□ 1.19
USP53-203ENST00000507597 ANKEF1Q9NU02 776 aa22.46■■□□□ 1.19
USP53-203ENST00000507597 RGL1Q9NZL6 768 aa22.46■■□□□ 1.19
USP53-203ENST00000507597 PCDHA7Q9UN72 937 aa22.46■■□□□ 1.19
USP53-203ENST00000507597 DNM3Q9UQ16 869 aa22.46■■□□□ 1.19
USP53-203ENST00000507597 MYH15Q9Y2K3 1946 aa22.46■■□□□ 1.19
USP53-203ENST00000507597 DDX11L8A8MPP1 907 aa22.45■■□□□ 1.18
USP53-203ENST00000507597 RPLP2P05387 115 aaKnown RBP22.45■■□□□ 1.18
USP53-203ENST00000507597 CTTNQ14247 550 aaKnown RBP22.45■■□□□ 1.18
USP53-203ENST00000507597 PLCB4Q15147 1175 aa22.45■■□□□ 1.18
USP53-203ENST00000507597 C1orf53Q5VUE5 145 aa22.45■■□□□ 1.18
USP53-203ENST00000507597 SLC39A5Q6ZMH5 540 aa22.45■■□□□ 1.18
USP53-203ENST00000507597 CATSPER3Q86XQ3 398 aa22.45■■□□□ 1.18
USP53-203ENST00000507597 HTATIP2Q9BUP3 242 aa22.45■■□□□ 1.18
USP53-203ENST00000507597 TELO2Q9Y4R8 837 aa22.45■■□□□ 1.18
USP53-203ENST00000507597 COL1A2P08123 1366 aa22.45■■□□□ 1.18
USP53-203ENST00000507597 C17orf102A2RUQ5 167 aa22.44■■□□□ 1.18
USP53-203ENST00000507597 YWHABP31946 246 aaKnown RBP22.44■■□□□ 1.18
USP53-203ENST00000507597 MNX1P50219 401 aaPredicted RBP22.44■■□□□ 1.18
USP53-203ENST00000507597 SOX10P56693 466 aa22.44■■□□□ 1.18
USP53-203ENST00000507597 PPFIA1Q13136 1202 aa22.44■■□□□ 1.18
USP53-203ENST00000507597 ZRSR1Q15695 479 aaKnown RBP22.44■■□□□ 1.18
USP53-203ENST00000507597 CCDC73Q6ZRK6 1079 aa22.44■■□□□ 1.18
USP53-203ENST00000507597 CLIC6Q96NY7 704 aa22.44■■□□□ 1.18
USP53-203ENST00000507597 RNPEPQ9H4A4 650 aa22.44■■□□□ 1.18
USP53-203ENST00000507597 SEPT9Q9UHD8 586 aaPredicted RBP22.44■■□□□ 1.18
USP53-203ENST00000507597 NOD1Q9Y239 953 aa22.44■■□□□ 1.18
USP53-203ENST00000507597 DOCK5Q9H7D0 1870 aa22.43■■□□□ 1.18
USP53-203ENST00000507597 DCDC2CA8MYV0 355 aa22.43■■□□□ 1.18
USP53-203ENST00000507597 MAGEB2O15479 319 aa22.43■■□□□ 1.18
USP53-203ENST00000507597 MED24O75448 989 aa22.43■■□□□ 1.18
USP53-203ENST00000507597 SMIM10L2AP0DMW4 78 aa22.43■■□□□ 1.18
USP53-203ENST00000507597 SMIM10L2BP0DMW5 78 aa22.43■■□□□ 1.18
USP53-203ENST00000507597 PSMC6P62333 389 aa22.43■■□□□ 1.18
USP53-203ENST00000507597 HYIQ5T013 277 aa22.43■■□□□ 1.18
USP53-203ENST00000507597 SLC43A3Q8NBI5 491 aa22.43■■□□□ 1.18
USP53-203ENST00000507597 SYMPKQ92797 1274 aaKnown RBP22.43■■□□□ 1.18
USP53-203ENST00000507597 NIFKQ9BYG3 293 aaKnown RBP22.43■■□□□ 1.18
USP53-203ENST00000507597 KIAA1024Q9UPX6 916 aa22.43■■□□□ 1.18
USP53-203ENST00000507597 SPATA31C1P0DKV0 1188 aa22.42■■□□□ 1.18
USP53-203ENST00000507597 RRAGBQ5VZM2 374 aa22.42■■□□□ 1.18
USP53-203ENST00000507597 CLEC17AQ6ZS10 378 aa22.42■■□□□ 1.18
USP53-203ENST00000507597 RETREG2Q8NC44 543 aa22.42■■□□□ 1.18
USP53-203ENST00000507597 DIS3LQ8TF46 1054 aaKnown RBP22.42■■□□□ 1.18
USP53-203ENST00000507597 CCDC34Q96HJ3 373 aa22.42■■□□□ 1.18
USP53-203ENST00000507597 CEP170P1Q96L14 293 aa22.42■■□□□ 1.18
USP53-203ENST00000507597 TOX2Q96NM4 488 aa22.42■■□□□ 1.18
USP53-203ENST00000507597 DDX19AQ9NUU7 478 aaKnown RBP22.42■■□□□ 1.18
USP53-203ENST00000507597 HDAC6Q9UBN7 1215 aa22.42■■□□□ 1.18
USP53-203ENST00000507597 GTF2IRD1Q9UHL9 959 aa22.42■■□□□ 1.18
USP53-203ENST00000507597 DBR1Q9UK59 544 aaKnown RBP22.42■■□□□ 1.18
USP53-203ENST00000507597 A0A1W2PQ27 194 aa22.41■■□□□ 1.18
USP53-203ENST00000507597 A0A1W2PQ64 194 aa22.41■■□□□ 1.18
USP53-203ENST00000507597 A0A1W2PQD8 194 aa22.41■■□□□ 1.18
USP53-203ENST00000507597 PP2D1A8MPX8 630 aa22.41■■□□□ 1.18
USP53-203ENST00000507597 ZNF862O60290 1169 aa22.41■■□□□ 1.18
USP53-203ENST00000507597 INSRRP14616 1297 aa22.41■■□□□ 1.18
USP53-203ENST00000507597 CMA1P23946 247 aa22.41■■□□□ 1.18
USP53-203ENST00000507597 TMOD1P28289 359 aa22.41■■□□□ 1.18
USP53-203ENST00000507597 CDC25AP30304 524 aa22.41■■□□□ 1.18
USP53-203ENST00000507597 ATN1P54259 1190 aaPredicted RBP22.41■■□□□ 1.18
USP53-203ENST00000507597 GRIK4Q16099 956 aa22.41■■□□□ 1.18
USP53-203ENST00000507597 UGCGQ16739 394 aa22.41■■□□□ 1.18
USP53-203ENST00000507597 AXDND1Q5T1B0 1012 aaPredicted RBP22.41■■□□□ 1.18
USP53-203ENST00000507597 TRMT1LQ7Z2T5 733 aaKnown RBP22.41■■□□□ 1.18
USP53-203ENST00000507597 KIAA0100Q14667 2235 aaKnown RBP22.41■■□□□ 1.18
USP53-203ENST00000507597 ARHGEF35A5YM69 484 aa22.4■■□□□ 1.18
USP53-203ENST00000507597 GAS2O43903 313 aaKnown RBP22.4■■□□□ 1.18
USP53-203ENST00000507597 ATP4AP20648 1035 aa22.4■■□□□ 1.18
USP53-203ENST00000507597 CDK7P50613 346 aa22.4■■□□□ 1.18
USP53-203ENST00000507597 GRIN1Q05586 938 aa22.4■■□□□ 1.18
USP53-203ENST00000507597 TBC1D8BQ0IIM8 1120 aa22.4■■□□□ 1.18
USP53-203ENST00000507597 SNX17Q15036 470 aa22.4■■□□□ 1.18
USP53-203ENST00000507597 XKR9Q5GH70 373 aa22.4■■□□□ 1.18
USP53-203ENST00000507597 RSPH3Q86UC2 560 aa22.4■■□□□ 1.18
USP53-203ENST00000507597 EPSTI1Q96J88 318 aa22.4■■□□□ 1.18
USP53-203ENST00000507597 MMTAG2Q9BU76 263 aaKnown RBP22.4■■□□□ 1.18
USP53-203ENST00000507597 GDPD2Q9HCC8 539 aa22.4■■□□□ 1.18
USP53-203ENST00000507597 STK17AQ9UEE5 414 aa22.4■■□□□ 1.18
USP53-203ENST00000507597 RFC5P40937 340 aa22.39■■□□□ 1.17
USP53-203ENST00000507597 DNM2P50570 870 aa22.39■■□□□ 1.17
USP53-203ENST00000507597 SPECC1Q5M775 1068 aa22.39■■□□□ 1.17
USP53-203ENST00000507597 RESP18Q5W5W9 173 aa22.39■■□□□ 1.17
USP53-203ENST00000507597 TAF2Q6P1X5 1199 aa22.39■■□□□ 1.17
USP53-203ENST00000507597 POTEGQ6S5H5 508 aa22.39■■□□□ 1.17
USP53-203ENST00000507597 ANKRD33Q7Z3H0 272 aa22.39■■□□□ 1.17
USP53-203ENST00000507597 UBE2Q1Q7Z7E8 422 aa22.39■■□□□ 1.17
USP53-203ENST00000507597 ZNF710Q8N1W2 664 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms