RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 FRMPD4Q14CM0 1322 aa16.02■□□□□ 0.16
DDR1-260ENST00000507533 C2CD4DB7Z1M9 353 aa16.02■□□□□ 0.16
DDR1-260ENST00000507533 M0QZ92 97 aa16.02■□□□□ 0.16
DDR1-260ENST00000507533 HOXB8P17481 243 aaPredicted RBP16.02■□□□□ 0.16
DDR1-260ENST00000507533 SARSP49591 514 aaKnown RBP16.02■□□□□ 0.16
DDR1-260ENST00000507533 CLCN5P51795 746 aa16.02■□□□□ 0.16
DDR1-260ENST00000507533 TMEM62Q0P6H9 643 aa16.02■□□□□ 0.16
DDR1-260ENST00000507533 APOBRQ0VD83 1088 aa16.02■□□□□ 0.16
DDR1-260ENST00000507533 GIMAP8Q8ND71 665 aaPredicted RBP16.02■□□□□ 0.16
DDR1-260ENST00000507533 RASGRP4Q8TDF6 673 aa16.02■□□□□ 0.16
DDR1-260ENST00000507533 GLG1Q92896 1179 aa16.02■□□□□ 0.16
DDR1-260ENST00000507533 PIGSQ96S52 555 aa16.02■□□□□ 0.16
DDR1-260ENST00000507533 KIAA1671Q9BY89 1806 aa16.02■□□□□ 0.16
DDR1-260ENST00000507533 WDR87Q6ZQQ6 2873 aa16.01■□□□□ 0.15
DDR1-260ENST00000507533 MED19A0JLT2 244 aaPredicted RBP16.01■□□□□ 0.15
DDR1-260ENST00000507533 TBKBP1A7MCY6 615 aa16.01■□□□□ 0.15
DDR1-260ENST00000507533 MFAP1P55081 439 aaKnown RBP16.01■□□□□ 0.15
DDR1-260ENST00000507533 IFIT1BQ5T764 474 aaKnown RBP16.01■□□□□ 0.15
DDR1-260ENST00000507533 NLRX1Q86UT6 975 aa16.01■□□□□ 0.15
DDR1-260ENST00000507533 TICAM2Q86XR7 235 aa16.01■□□□□ 0.15
DDR1-260ENST00000507533 COLGALT1Q8NBJ5 622 aa16.01■□□□□ 0.15
DDR1-260ENST00000507533 SEPT1Q8WYJ6 367 aa16.01■□□□□ 0.15
DDR1-260ENST00000507533 UBAC1Q9BSL1 405 aa16.01■□□□□ 0.15
DDR1-260ENST00000507533 TMX1Q9H3N1 280 aa16.01■□□□□ 0.15
DDR1-260ENST00000507533 CDH22Q9UJ99 828 aa16.01■□□□□ 0.15
DDR1-260ENST00000507533 IGSF9BQ9UPX0 1349 aa16■□□□□ 0.15
DDR1-260ENST00000507533 GSTTP1A0A1W2PQM5 241 aa16■□□□□ 0.15
DDR1-260ENST00000507533 PALM3A6NDB9 673 aaPredicted RBP16■□□□□ 0.15
DDR1-260ENST00000507533 RRN3P2A6NIE6 340 aa16■□□□□ 0.15
DDR1-260ENST00000507533 SLC35G1Q2M3R5 365 aa16■□□□□ 0.15
DDR1-260ENST00000507533 TPRNQ4KMQ1 711 aa16■□□□□ 0.15
DDR1-260ENST00000507533 FAM102BQ5T8I3 360 aa16■□□□□ 0.15
DDR1-260ENST00000507533 CES5AQ6NT32 575 aa16■□□□□ 0.15
DDR1-260ENST00000507533 NECTIN4Q96NY8 510 aa16■□□□□ 0.15
DDR1-260ENST00000507533 CELF4Q9BZC1 486 aaKnown RBP16■□□□□ 0.15
DDR1-260ENST00000507533 SMARCAD1Q9H4L7 1026 aa16■□□□□ 0.15
DDR1-260ENST00000507533 POMKQ9H5K3 350 aa16■□□□□ 0.15
DDR1-260ENST00000507533 ENTPD7Q9NQZ7 604 aa16■□□□□ 0.15
DDR1-260ENST00000507533 TYW1Q9NV66 732 aaKnown RBP16■□□□□ 0.15
DDR1-260ENST00000507533 HCSTQ9UBK5 93 aa16■□□□□ 0.15
DDR1-260ENST00000507533 ZBTB47Q9UFB7 747 aaPredicted RBP16■□□□□ 0.15
DDR1-260ENST00000507533 PUF60Q9UHX1 559 aaKnown RBP16■□□□□ 0.15
DDR1-260ENST00000507533 MYH6P13533 1939 aa16■□□□□ 0.15
DDR1-260ENST00000507533 PLXNA4Q9HCM2 1894 aa15.99■□□□□ 0.15
DDR1-260ENST00000507533 HIDE1A8MVS5 230 aa15.99■□□□□ 0.15
DDR1-260ENST00000507533 ATP9AO75110 1047 aa15.99■□□□□ 0.15
DDR1-260ENST00000507533 ASGR2P07307 311 aa15.99■□□□□ 0.15
DDR1-260ENST00000507533 INSRRP14616 1297 aa15.99■□□□□ 0.15
DDR1-260ENST00000507533 PDE1AP54750 535 aa15.99■□□□□ 0.15
DDR1-260ENST00000507533 NFX1Q12986 1120 aaKnown RBP15.99■□□□□ 0.15
DDR1-260ENST00000507533 TMEM266Q2M3C6 531 aa15.99■□□□□ 0.15
DDR1-260ENST00000507533 PCNX4Q63HM2 1172 aa15.99■□□□□ 0.15
DDR1-260ENST00000507533 XRRA1Q6P2D8 792 aa15.99■□□□□ 0.15
DDR1-260ENST00000507533 FLCNQ8NFG4 579 aa15.99■□□□□ 0.15
DDR1-260ENST00000507533 MRPS27Q92552 414 aaKnown RBP15.99■□□□□ 0.15
DDR1-260ENST00000507533 CASP10Q92851 521 aa15.99■□□□□ 0.15
DDR1-260ENST00000507533 RMDN1Q96DB5 314 aa15.99■□□□□ 0.15
DDR1-260ENST00000507533 TCF25Q9BQ70 676 aa15.99■□□□□ 0.15
DDR1-260ENST00000507533 ADAM7Q9H2U9 754 aa15.99■□□□□ 0.15
DDR1-260ENST00000507533 RIOX1Q9H6W3 641 aa15.99■□□□□ 0.15
DDR1-260ENST00000507533 NGRNQ9NPE2 291 aaKnown RBP15.99■□□□□ 0.15
DDR1-260ENST00000507533 RNF216Q9NWF9 866 aaPredicted RBP15.99■□□□□ 0.15
DDR1-260ENST00000507533 LZTS1Q9Y250 596 aa15.99■□□□□ 0.15
DDR1-260ENST00000507533 PCDHB15Q9Y5E8 787 aa15.99■□□□□ 0.15
DDR1-260ENST00000507533 GVINP1Q7Z2Y8 2422 aa15.99■□□□□ 0.15
DDR1-260ENST00000507533 PNMA6FA0A0J9YX94 578 aa15.98■□□□□ 0.15
DDR1-260ENST00000507533 MGEA5O60502 916 aa15.98■□□□□ 0.15
DDR1-260ENST00000507533 PLCB3Q01970 1234 aa15.98■□□□□ 0.15
DDR1-260ENST00000507533 ANKRD45Q5TZF3 282 aa15.98■□□□□ 0.15
DDR1-260ENST00000507533 DGLUCYQ7Z3D6 616 aa15.98■□□□□ 0.15
DDR1-260ENST00000507533 KRT23Q9C075 422 aa15.98■□□□□ 0.15
DDR1-260ENST00000507533 LIMD1Q9UGP4 676 aa15.98■□□□□ 0.15
DDR1-260ENST00000507533 PCDHA2Q9Y5H9 948 aa15.98■□□□□ 0.15
DDR1-260ENST00000507533 KCNA2P16389 499 aa15.97■□□□□ 0.15
DDR1-260ENST00000507533 LAG3P18627 525 aa15.97■□□□□ 0.15
DDR1-260ENST00000507533 ITIH3Q06033 890 aa15.97■□□□□ 0.15
DDR1-260ENST00000507533 ANGPT1Q15389 498 aa15.97■□□□□ 0.15
DDR1-260ENST00000507533 CWF19L1Q69YN2 538 aaKnown RBP15.97■□□□□ 0.15
DDR1-260ENST00000507533 SMARCC2Q8TAQ2 1214 aa15.97■□□□□ 0.15
DDR1-260ENST00000507533 KCNG4Q8TDN1 519 aa15.97■□□□□ 0.15
DDR1-260ENST00000507533 ADAM2Q99965 735 aa15.97■□□□□ 0.15
DDR1-260ENST00000507533 CWH43Q9H720 699 aa15.97■□□□□ 0.15
DDR1-260ENST00000507533 RGS18Q9NS28 235 aa15.97■□□□□ 0.15
DDR1-260ENST00000507533 ZNF292O60281 2723 aa15.96■□□□□ 0.15
DDR1-260ENST00000507533 KDM3AQ9Y4C1 1321 aa15.96■□□□□ 0.15
DDR1-260ENST00000507533 DENND3A2RUS2 1198 aa15.96■□□□□ 0.15
DDR1-260ENST00000507533 PI15O43692 258 aa15.96■□□□□ 0.15
DDR1-260ENST00000507533 CYTH3O43739 400 aa15.96■□□□□ 0.15
DDR1-260ENST00000507533 MTHFRP42898 656 aa15.96■□□□□ 0.15
DDR1-260ENST00000507533 KRT76Q01546 638 aa15.96■□□□□ 0.15
DDR1-260ENST00000507533 GRM4Q14833 912 aa15.96■□□□□ 0.15
DDR1-260ENST00000507533 SEC23AQ15436 765 aa15.96■□□□□ 0.15
DDR1-260ENST00000507533 USP17L6PQ6QN14 398 aa15.96■□□□□ 0.15
DDR1-260ENST00000507533 SLC24A5Q71RS6 500 aa15.96■□□□□ 0.15
DDR1-260ENST00000507533 TMC7Q7Z402 723 aa15.96■□□□□ 0.15
DDR1-260ENST00000507533 CCDC105Q8IYK2 499 aa15.96■□□□□ 0.15
DDR1-260ENST00000507533 ZDHHC14Q8IZN3 488 aa15.96■□□□□ 0.15
DDR1-260ENST00000507533 NME8Q8N427 588 aa15.96■□□□□ 0.15
DDR1-260ENST00000507533 TDRD5Q8NAT2 981 aaKnown RBP15.96■□□□□ 0.15
DDR1-260ENST00000507533 TRAPPC12Q8WVT3 735 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms