RNA–Protein interactions for RNA: ENST00000507488.6

ATP2C1-212, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATP2C1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-212ENST00000507488 LONRF2Q1L5Z9 754 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 GJC2Q5T442 439 aaPredicted RBP5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 TAF3Q5VWG9 929 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 NSMFQ6X4W1 530 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 ARHGAP27Q6ZUM4 889 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 OTOP1Q7RTM1 612 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 HNRNPLLQ8WVV9 542 aaKnown RBP5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 DHTKD1Q96HY7 919 aaPredicted RBP5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 AK8Q96MA6 479 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 WRNIP1Q96S55 665 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 PNKPQ96T60 521 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 DNAJC7Q99615 494 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 NOC4LQ9BVI4 516 aaKnown RBP5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 KCTD10Q9H3F6 313 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 CAPN11Q9UMQ6 739 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 EPN1Q9Y6I3 576 aaPredicted RBP5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 ZHX2Q9Y6X8 837 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 PAPPA2Q9BXP8 1791 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 CCDC66A2RUB6 948 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 CTAGE15A4D2H0 777 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 GOLGA8IPA6NC78 632 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 ERICH4A6NGS2 130 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 GOLGA8JA6NMD2 632 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 GJB1P08034 283 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 CTAGE8P0CG41 777 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 CYP2C19P33261 490 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 DNM2P50570 870 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 RPS6P62753 249 aaKnown RBP5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 C2CD6Q53TS8 623 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 GPATCH4Q5T3I0 446 aaKnown RBP5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 LMBRD2Q68DH5 695 aaPredicted RBP5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 CIAPIN1Q6FI81 312 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 CTAGE6Q86UF2 777 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 CTAGE4Q8IX94 777 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 MSANTD4Q8NCY6 345 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 PLEKHO2Q8TD55 490 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 HDAC7Q8WUI4 952 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 KAT5Q92993 513 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 CCDC47Q96A33 483 aaKnown RBP5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 MS4A14Q96JA4 679 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 CDK5RAP3Q96JB5 506 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 FIZ1Q96SL8 496 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 FHDC1Q9C0D6 1143 aaPredicted RBP5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 RPAP3Q9H6T3 665 aaPredicted RBP5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 CCPG1Q9ULG6 757 aa5.08□□□□□ -1.6
ATP2C1-212ENST00000507488 ZMYM2Q9UBW7 1377 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 BICDL2A1A5D9 508 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 TRAF5O00463 557 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 ERLIN1O75477 346 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 CSDE1O75534 798 aaKnown RBP5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 EDN1P05305 212 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 ZNF76P36508 570 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 ZCWPW2Q504Y3 356 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 KRT79Q5XKE5 535 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 CENPPQ6IPU0 288 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 LLGL2Q6P1M3 1020 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 RRAGAQ7L523 313 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 PHLDB2Q86SQ0 1253 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 CERS3Q8IU89 383 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 RBM46Q8TBY0 533 aaKnown RBP5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 PPP1R16BQ96T49 567 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 DHX36Q9H2U1 1008 aaKnown RBP5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 HAUS4Q9H6D7 363 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 VCPKMTQ9H867 229 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 TOPORSQ9NS56 1045 aaPredicted RBP5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 RAB21Q9UL25 225 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 MYO6Q9UM54 1294 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 SIK3Q9Y2K2 1263 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 PCDHB13Q9Y5F0 798 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 ESYT2A0FGR8 921 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 ZSCAN5CA6NGD5 496 aaPredicted RBP5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 SPDYE3A6NKU9 549 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 MAP2K7O14733 419 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 DHX15O43143 795 aaKnown RBP5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 TGFB1I1O43294 461 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 RHOXF2BP0C7M4 288 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 MYBL2P10244 700 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 PPP1R2P41236 205 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 MRPL12P52815 198 aaKnown RBP5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 KRT83P78385 493 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 SF3B2Q13435 895 aaKnown RBP5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 DRP2Q13474 957 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 DCAF17Q5H9S7 520 aaPredicted RBP5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 BEND6Q5SZJ8 279 aaPredicted RBP5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 DAB2IPQ5VWQ8 1189 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 PPP4R3AQ6IN85 833 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 DPY19L2P1Q6NXN4 242 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 GMCL1P1Q8NEA9 526 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 FLAD1Q8NFF5 587 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 GMCL1Q96IK5 515 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 PSMD1Q99460 953 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 RHOXF2Q9BQY4 288 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 NUP58Q9BVL2 599 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 KCNH7Q9NS40 1196 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 SUGT1Q9Y2Z0 365 aa5.07□□□□□ -1.6
ATP2C1-212ENST00000507488 TESPA1A2RU30 521 aaPredicted RBP5.06□□□□□ -1.6
ATP2C1-212ENST00000507488 TMCO5BA8MYB1 307 aa5.06□□□□□ -1.6
ATP2C1-212ENST00000507488 N4BP1O75113 896 aaKnown RBP5.06□□□□□ -1.6
ATP2C1-212ENST00000507488 PSMD10O75832 226 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms