RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ALDH1L1O75891 902 aa4.74□□□□□ -1.65
LSM6-205ENST00000507449 C8BP07358 591 aa4.74□□□□□ -1.65
LSM6-205ENST00000507449 AOAHP28039 575 aa4.74□□□□□ -1.65
LSM6-205ENST00000507449 MC4RP32245 332 aa4.74□□□□□ -1.65
LSM6-205ENST00000507449 BUD31P41223 144 aaPredicted RBP4.74□□□□□ -1.65
LSM6-205ENST00000507449 FNTBP49356 437 aa4.74□□□□□ -1.65
LSM6-205ENST00000507449 SESN3P58005 492 aa4.74□□□□□ -1.65
LSM6-205ENST00000507449 DBPQ10586 325 aaPredicted RBP4.74□□□□□ -1.65
LSM6-205ENST00000507449 LRRC32Q14392 662 aa4.74□□□□□ -1.65
LSM6-205ENST00000507449 PDCD1Q15116 288 aa4.74□□□□□ -1.65
LSM6-205ENST00000507449 ODR4Q5SWX8 454 aa4.74□□□□□ -1.65
LSM6-205ENST00000507449 SYDE2Q5VT97 1194 aa4.74□□□□□ -1.65
LSM6-205ENST00000507449 TEPPQ6URK8 271 aa4.74□□□□□ -1.65
LSM6-205ENST00000507449 ZNF605Q86T29 641 aa4.74□□□□□ -1.65
LSM6-205ENST00000507449 RTN4RL1Q86UN2 441 aaPredicted RBP4.74□□□□□ -1.65
LSM6-205ENST00000507449 AMIGO3Q86WK7 504 aa4.74□□□□□ -1.65
LSM6-205ENST00000507449 ZNF610Q8N9Z0 462 aa4.74□□□□□ -1.65
LSM6-205ENST00000507449 RTF1Q92541 710 aaKnown RBP4.74□□□□□ -1.65
LSM6-205ENST00000507449 ALG3Q92685 438 aa4.74□□□□□ -1.65
LSM6-205ENST00000507449 ZNF496Q96IT1 587 aaPredicted RBP4.74□□□□□ -1.65
LSM6-205ENST00000507449 SMAD5Q99717 465 aaKnown RBP4.74□□□□□ -1.65
LSM6-205ENST00000507449 SYT3Q9BQG1 590 aa4.74□□□□□ -1.65
LSM6-205ENST00000507449 RAPGEFL1Q9UHV5 662 aa4.74□□□□□ -1.65
LSM6-205ENST00000507449 TNKSO95271 1327 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 IRS2Q9Y4H2 1338 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 PARNO95453 639 aaKnown RBP4.73□□□□□ -1.65
LSM6-205ENST00000507449 MPIG6BO95866 241 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 CYP17A1P05093 508 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 LSP1P33241 339 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 IARSP41252 1262 aaKnown RBP4.73□□□□□ -1.65
LSM6-205ENST00000507449 MC3RP41968 323 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 HERVK_113P62684 666 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 MCL1Q07820 350 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 MOGSQ13724 837 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 TTF1Q15361 905 aaPredicted RBP4.73□□□□□ -1.65
LSM6-205ENST00000507449 EPHA7Q15375 998 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 ABCB5Q2M3G0 1257 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 CD276Q5ZPR3 534 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 LIPIQ6XZB0 460 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 ETV3LQ6ZN32 361 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 PRR23BQ6ZRT6 265 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 RASSF3Q86WH2 238 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 CILP2Q8IUL8 1156 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 JDP2Q8WYK2 163 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 TOE1Q96GM8 510 aaKnown RBP4.73□□□□□ -1.65
LSM6-205ENST00000507449 SCYL1Q96KG9 808 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 MENTQ9BUN1 341 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 ZDHHC5Q9C0B5 715 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 METTL14Q9HCE5 456 aaKnown RBP4.73□□□□□ -1.65
LSM6-205ENST00000507449 C14orf119Q9NWQ9 140 aa4.73□□□□□ -1.65
LSM6-205ENST00000507449 ABLIM1O14639 778 aa4.72□□□□□ -1.65
LSM6-205ENST00000507449 ATF2P15336 505 aa4.72□□□□□ -1.65
LSM6-205ENST00000507449 CDR1P51861 262 aa4.72□□□□□ -1.65
LSM6-205ENST00000507449 NCKAP1LP55160 1127 aa4.72□□□□□ -1.65
LSM6-205ENST00000507449 SRSF3P84103 164 aaKnown RBP4.72□□□□□ -1.65
LSM6-205ENST00000507449 TMEM62Q0P6H9 643 aa4.72□□□□□ -1.65
LSM6-205ENST00000507449 PASD1Q8IV76 773 aa4.72□□□□□ -1.65
LSM6-205ENST00000507449 CPA5Q8WXQ8 436 aa4.72□□□□□ -1.65
LSM6-205ENST00000507449 AHCYL2Q96HN2 611 aaKnown RBP4.72□□□□□ -1.65
LSM6-205ENST00000507449 GBP4Q96PP9 640 aa4.72□□□□□ -1.65
LSM6-205ENST00000507449 DIRC2Q96SL1 478 aa4.72□□□□□ -1.65
LSM6-205ENST00000507449 CEP89Q96ST8 783 aa4.72□□□□□ -1.65
LSM6-205ENST00000507449 YIPF4Q9BSR8 244 aa4.72□□□□□ -1.65
LSM6-205ENST00000507449 MCOLN1Q9GZU1 580 aa4.72□□□□□ -1.65
LSM6-205ENST00000507449 CNTD2Q9H8S5 307 aa4.72□□□□□ -1.65
LSM6-205ENST00000507449 SLC39A2Q9NP94 309 aa4.72□□□□□ -1.65
LSM6-205ENST00000507449 MBD1Q9UIS9 605 aaPredicted RBP4.72□□□□□ -1.65
LSM6-205ENST00000507449 MSRAQ9UJ68 235 aa4.72□□□□□ -1.65
LSM6-205ENST00000507449 PCDHA5Q9Y5H7 936 aa4.72□□□□□ -1.65
LSM6-205ENST00000507449 GOLGA6L22H0YM25 854 aa4.71□□□□□ -1.66
LSM6-205ENST00000507449 ELL2O00472 640 aaPredicted RBP4.71□□□□□ -1.66
LSM6-205ENST00000507449 NFIBO00712 420 aa4.71□□□□□ -1.66
LSM6-205ENST00000507449 KDM1AO60341 852 aa4.71□□□□□ -1.66
LSM6-205ENST00000507449 H2AFYO75367 372 aaKnown RBP4.71□□□□□ -1.66
LSM6-205ENST00000507449 CD40P25942 277 aa4.71□□□□□ -1.66
LSM6-205ENST00000507449 GPR3P46089 330 aa4.71□□□□□ -1.66
LSM6-205ENST00000507449 NEK2P51955 445 aa4.71□□□□□ -1.66
LSM6-205ENST00000507449 EPHB3P54753 998 aa4.71□□□□□ -1.66
LSM6-205ENST00000507449 CACNB2Q08289 660 aaPredicted RBP4.71□□□□□ -1.66
LSM6-205ENST00000507449 KLF1Q13351 362 aaPredicted RBP4.71□□□□□ -1.66
LSM6-205ENST00000507449 ZBTB41Q5SVQ8 909 aa4.71□□□□□ -1.66
LSM6-205ENST00000507449 MPZL3Q6UWV2 235 aa4.71□□□□□ -1.66
LSM6-205ENST00000507449 LDHDQ86WU2 507 aa4.71□□□□□ -1.66
LSM6-205ENST00000507449 ZZZ3Q8IYH5 903 aa4.71□□□□□ -1.66
LSM6-205ENST00000507449 BHLHE22Q8NFJ8 381 aaPredicted RBP4.71□□□□□ -1.66
LSM6-205ENST00000507449 LMBR1Q8WVP7 490 aa4.71□□□□□ -1.66
LSM6-205ENST00000507449 ERCC4Q92889 916 aaPredicted RBP4.71□□□□□ -1.66
LSM6-205ENST00000507449 AMNQ9BXJ7 453 aa4.71□□□□□ -1.66
LSM6-205ENST00000507449 NSUN3Q9H649 340 aaKnown RBP4.71□□□□□ -1.66
LSM6-205ENST00000507449 GCM1Q9NP62 436 aa4.71□□□□□ -1.66
LSM6-205ENST00000507449 NOC2LQ9Y3T9 749 aaKnown RBP4.71□□□□□ -1.66
LSM6-205ENST00000507449 ASB1Q9Y576 335 aa4.71□□□□□ -1.66
LSM6-205ENST00000507449 EID1Q9Y6B2 187 aa4.71□□□□□ -1.66
LSM6-205ENST00000507449 PRAMEF22A3QJZ6 481 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 ZNF839A8K0R7 811 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 MARCH6O60337 910 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 PEX10O60683 326 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 FBXO21O94952 628 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 MT-CO1P00395 513 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 PRLP01236 227 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms