RNA–Protein interactions for RNA: ENST00000507411.5

CLDND1-214, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 815 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-214ENST00000507411 TEX15Q9BXT5 2789 aa9.08□□□□□ -0.96
CLDND1-214ENST00000507411 DENND4AQ7Z401 1863 aa9.07□□□□□ -0.96
CLDND1-214ENST00000507411 HIDE1A8MVS5 230 aa9.07□□□□□ -0.96
CLDND1-214ENST00000507411 TRIM6-TRIM34B2RNG4 842 aa9.07□□□□□ -0.96
CLDND1-214ENST00000507411 HAS3O00219 553 aa9.07□□□□□ -0.96
CLDND1-214ENST00000507411 UBTFL1P0CB47 393 aaPredicted RBP9.07□□□□□ -0.96
CLDND1-214ENST00000507411 PLA2G2AP14555 144 aa9.07□□□□□ -0.96
CLDND1-214ENST00000507411 ARHGAP1Q07960 439 aa9.07□□□□□ -0.96
CLDND1-214ENST00000507411 ZNF252P-AS1Q0IIN9 211 aa9.07□□□□□ -0.96
CLDND1-214ENST00000507411 BAATQ14032 418 aaPredicted RBP9.07□□□□□ -0.96
CLDND1-214ENST00000507411 CCDC158Q5M9N0 1113 aa9.07□□□□□ -0.96
CLDND1-214ENST00000507411 TSSK4Q6SA08 328 aa9.07□□□□□ -0.96
CLDND1-214ENST00000507411 RSAD2Q8WXG1 361 aa9.07□□□□□ -0.96
CLDND1-214ENST00000507411 SHDQ96IW2 340 aa9.07□□□□□ -0.96
CLDND1-214ENST00000507411 RIOK1Q9BRS2 568 aaKnown RBP9.07□□□□□ -0.96
CLDND1-214ENST00000507411 SCNM1Q9BWG6 230 aa9.07□□□□□ -0.96
CLDND1-214ENST00000507411 FAM126AQ9BYI3 521 aaPredicted RBP9.07□□□□□ -0.96
CLDND1-214ENST00000507411 NGRNQ9NPE2 291 aaKnown RBP9.07□□□□□ -0.96
CLDND1-214ENST00000507411 MYO9AB2RTY4 2548 aa9.07□□□□□ -0.96
CLDND1-214ENST00000507411 MAGEB6P1A0A0J9YX57 407 aa9.06□□□□□ -0.96
CLDND1-214ENST00000507411 C17orf102A2RUQ5 167 aa9.06□□□□□ -0.96
CLDND1-214ENST00000507411 ARHGAP6O43182 974 aa9.06□□□□□ -0.96
CLDND1-214ENST00000507411 GHRP10912 638 aa9.06□□□□□ -0.96
CLDND1-214ENST00000507411 NOVA1P51513 510 aaKnown RBP9.06□□□□□ -0.96
CLDND1-214ENST00000507411 IKQ13123 557 aaPredicted RBP9.06□□□□□ -0.96
CLDND1-214ENST00000507411 KANK3Q6NY19 840 aa9.06□□□□□ -0.96
CLDND1-214ENST00000507411 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.06□□□□□ -0.96
CLDND1-214ENST00000507411 NPAS4Q8IUM7 802 aa9.06□□□□□ -0.96
CLDND1-214ENST00000507411 WWC1Q8IX03 1113 aa9.06□□□□□ -0.96
CLDND1-214ENST00000507411 C12orf50Q8NA57 414 aaPredicted RBP9.06□□□□□ -0.96
CLDND1-214ENST00000507411 LSM14BQ9BX40 385 aaKnown RBP9.06□□□□□ -0.96
CLDND1-214ENST00000507411 DCP1AQ9NPI6 582 aaPredicted RBP9.06□□□□□ -0.96
CLDND1-214ENST00000507411 DZANK1Q9NVP4 752 aa9.06□□□□□ -0.96
CLDND1-214ENST00000507411 PUF60Q9UHX1 559 aaKnown RBP9.06□□□□□ -0.96
CLDND1-214ENST00000507411 CFAP46Q8IYW2 2715 aa9.05□□□□□ -0.96
CLDND1-214ENST00000507411 PTPDC1A2A3K4 754 aa9.05□□□□□ -0.96
CLDND1-214ENST00000507411 TOP3BO95985 862 aaKnown RBP9.05□□□□□ -0.96
CLDND1-214ENST00000507411 STAG3L1P0CL83 205 aa9.05□□□□□ -0.96
CLDND1-214ENST00000507411 MAGEA9P43362 315 aa9.05□□□□□ -0.96
CLDND1-214ENST00000507411 PTPN14Q15678 1187 aa9.05□□□□□ -0.96
CLDND1-214ENST00000507411 LY6KQ17RY6 165 aa9.05□□□□□ -0.96
CLDND1-214ENST00000507411 STPG1Q5TH74 334 aa9.05□□□□□ -0.96
CLDND1-214ENST00000507411 CCDC62Q6P9F0 684 aa9.05□□□□□ -0.96
CLDND1-214ENST00000507411 PACS2Q86VP3 889 aa9.05□□□□□ -0.96
CLDND1-214ENST00000507411 RPAP2Q8IXW5 612 aaPredicted RBP9.05□□□□□ -0.96
CLDND1-214ENST00000507411 TMEFF1Q8IYR6 380 aa9.05□□□□□ -0.96
CLDND1-214ENST00000507411 SLC44A3Q8N4M1 653 aa9.05□□□□□ -0.96
CLDND1-214ENST00000507411 SDR42E1Q8WUS8 393 aa9.05□□□□□ -0.96
CLDND1-214ENST00000507411 NYAP2Q9P242 653 aa9.05□□□□□ -0.96
CLDND1-214ENST00000507411 LZTS1Q9Y250 596 aa9.05□□□□□ -0.96
CLDND1-214ENST00000507411 ASXL3Q9C0F0 2248 aa9.05□□□□□ -0.96
CLDND1-214ENST00000507411 B4DLN1 442 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 TMEM232C9JQI7 657 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 TREHO43280 583 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 PRB1P04280 392 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 BMP3P12645 472 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 CALML3P27482 149 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 GATMP50440 423 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 STAT2P52630 851 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 MRPL12P52815 198 aaKnown RBP9.04□□□□□ -0.96
CLDND1-214ENST00000507411 NRLP54845 237 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 STARD6P59095 220 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 UBXN2BQ14CS0 331 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 TSR1Q2NL82 804 aaKnown RBP9.04□□□□□ -0.96
CLDND1-214ENST00000507411 FAM26DQ5JW98 314 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 TMED8Q6PL24 325 aaPredicted RBP9.04□□□□□ -0.96
CLDND1-214ENST00000507411 TMC5Q6UXY8 1006 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 C16orf86Q6ZW13 317 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 RASGRP2Q7LDG7 609 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 TMC7Q7Z402 723 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 AMOTL1Q8IY63 956 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 CHURC1Q8WUH1 139 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 MRPS27Q92552 414 aaKnown RBP9.04□□□□□ -0.96
CLDND1-214ENST00000507411 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.04□□□□□ -0.96
CLDND1-214ENST00000507411 PCGF6Q9BYE7 350 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 CLIP2Q9UDT6 1046 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 CCPG1Q9ULG6 757 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 RAI2Q9Y5P3 530 aa9.04□□□□□ -0.96
CLDND1-214ENST00000507411 KANSL1LA0AUZ9 987 aa9.03□□□□□ -0.96
CLDND1-214ENST00000507411 EDNRBP24530 442 aa9.03□□□□□ -0.96
CLDND1-214ENST00000507411 SNAP25P60880 206 aa9.03□□□□□ -0.96
CLDND1-214ENST00000507411 SIM2Q14190 667 aaPredicted RBP9.03□□□□□ -0.96
CLDND1-214ENST00000507411 SF3A2Q15428 464 aaKnown RBP9.03□□□□□ -0.96
CLDND1-214ENST00000507411 ZNF605Q86T29 641 aa9.03□□□□□ -0.96
CLDND1-214ENST00000507411 FAM160B2Q86V87 743 aa9.03□□□□□ -0.96
CLDND1-214ENST00000507411 PROSER1Q86XN7 944 aa9.03□□□□□ -0.96
CLDND1-214ENST00000507411 COLGALT1Q8NBJ5 622 aa9.03□□□□□ -0.96
CLDND1-214ENST00000507411 NXPE3Q969Y0 559 aa9.03□□□□□ -0.96
CLDND1-214ENST00000507411 PRMT8Q9NR22 394 aaPredicted RBP9.03□□□□□ -0.96
CLDND1-214ENST00000507411 LRFN2Q9ULH4 789 aa9.03□□□□□ -0.96
CLDND1-214ENST00000507411 FRMPD2Q68DX3 1309 aaPredicted RBP9.03□□□□□ -0.96
CLDND1-214ENST00000507411 SPTAN1Q13813 2472 aaKnown RBP9.03□□□□□ -0.96
CLDND1-214ENST00000507411 MYH4Q9Y623 1939 aa9.02□□□□□ -0.97
CLDND1-214ENST00000507411 CYP2D7A0A087X1C5 515 aa9.02□□□□□ -0.97
CLDND1-214ENST00000507411 FAM170BA6NMN3 283 aa9.02□□□□□ -0.97
CLDND1-214ENST00000507411 GIPC1O14908 333 aa9.02□□□□□ -0.97
CLDND1-214ENST00000507411 CLASP2O75122 1294 aaKnown RBP9.02□□□□□ -0.97
CLDND1-214ENST00000507411 GBP2P32456 591 aaPredicted RBP9.02□□□□□ -0.97
CLDND1-214ENST00000507411 CA8P35219 290 aa9.02□□□□□ -0.97
CLDND1-214ENST00000507411 SMC1AQ14683 1233 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms