RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 RPA1P27694 616 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 TECP42680 631 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 PRKCEQ02156 737 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 PPFIA1Q13136 1202 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 PTK7Q13308 1070 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 HIC1Q14526 733 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 SLC39A14Q15043 492 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 TARBP2Q15633 366 aaKnown RBP10.92□□□□□ -0.66
SFXN1-205ENST00000506963 PTGISQ16647 500 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 XKR3Q5GH77 459 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 ZNF484Q5JVG2 852 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 MARCH8Q5T0T0 291 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 NCAPH2Q6IBW4 605 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 FAM173BQ6P4H8 233 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 DTHD1Q6ZMT9 781 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 RPAINQ86UA6 219 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 SERINC5Q86VE9 423 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 ERMNQ8TAM6 284 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 DPF3Q92784 378 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 AK8Q96MA6 479 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 EIF2AK1Q9BQI3 630 aaKnown RBP10.92□□□□□ -0.66
SFXN1-205ENST00000506963 TRPV6Q9H1D0 765 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 ZSWIM4Q9H7M6 989 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 TUFT1Q9NNX1 390 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 NRBP2Q9NSY0 501 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 TRMT13Q9NUP7 481 aaKnown RBP10.92□□□□□ -0.66
SFXN1-205ENST00000506963 CIZ1Q9ULV3 898 aaPredicted RBP10.92□□□□□ -0.66
SFXN1-205ENST00000506963 PPME1Q9Y570 386 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 ATP6V1DQ9Y5K8 247 aa10.92□□□□□ -0.66
SFXN1-205ENST00000506963 PITPNM1O00562 1244 aa10.91□□□□□ -0.66
SFXN1-205ENST00000506963 CAND2O75155 1236 aa10.91□□□□□ -0.66
SFXN1-205ENST00000506963 YEATS4O95619 227 aa10.91□□□□□ -0.66
SFXN1-205ENST00000506963 SPATA31C1P0DKV0 1188 aa10.91□□□□□ -0.66
SFXN1-205ENST00000506963 MARK3P27448 753 aa10.91□□□□□ -0.66
SFXN1-205ENST00000506963 GRIK4Q16099 956 aa10.91□□□□□ -0.66
SFXN1-205ENST00000506963 TRIM71Q2Q1W2 868 aaKnown RBP10.91□□□□□ -0.66
SFXN1-205ENST00000506963 FAM47CQ5HY64 1035 aa10.91□□□□□ -0.66
SFXN1-205ENST00000506963 HAUS3Q68CZ6 603 aa10.91□□□□□ -0.66
SFXN1-205ENST00000506963 TAF2Q6P1X5 1199 aa10.91□□□□□ -0.66
SFXN1-205ENST00000506963 LINC00301Q8NCQ3 95 aa10.91□□□□□ -0.66
SFXN1-205ENST00000506963 CAGE1Q8TC20 777 aa10.91□□□□□ -0.66
SFXN1-205ENST00000506963 CEP89Q96ST8 783 aa10.91□□□□□ -0.66
SFXN1-205ENST00000506963 LXNQ9BS40 222 aa10.91□□□□□ -0.66
SFXN1-205ENST00000506963 FTOQ9C0B1 505 aaKnown RBP eCLIP10.91□□□□□ -0.66
SFXN1-205ENST00000506963 SETD4Q9NVD3 440 aa10.91□□□□□ -0.66
SFXN1-205ENST00000506963 RGL1Q9NZL6 768 aa10.91□□□□□ -0.66
SFXN1-205ENST00000506963 WRAP73Q9P2S5 460 aaPredicted RBP10.91□□□□□ -0.66
SFXN1-205ENST00000506963 LRWD1Q9UFC0 647 aa10.91□□□□□ -0.66
SFXN1-205ENST00000506963 TRPC6Q9Y210 931 aa10.91□□□□□ -0.66
SFXN1-205ENST00000506963 RBM19Q9Y4C8 960 aaKnown RBP10.91□□□□□ -0.66
SFXN1-205ENST00000506963 SRPRBQ9Y5M8 271 aaKnown RBP10.91□□□□□ -0.66
SFXN1-205ENST00000506963 CLIC4Q9Y696 253 aa10.91□□□□□ -0.66
SFXN1-205ENST00000506963 LTBP2Q14767 1821 aa10.91□□□□□ -0.66
SFXN1-205ENST00000506963 TRIM43BA6NCK2 446 aa10.9□□□□□ -0.66
SFXN1-205ENST00000506963 TREHO43280 583 aa10.9□□□□□ -0.66
SFXN1-205ENST00000506963 PPP6R2O75170 966 aa10.9□□□□□ -0.66
SFXN1-205ENST00000506963 LONP1P36776 959 aaKnown RBP10.9□□□□□ -0.66
SFXN1-205ENST00000506963 HYIQ5T013 277 aa10.9□□□□□ -0.66
SFXN1-205ENST00000506963 ANO5Q75V66 913 aa10.9□□□□□ -0.66
SFXN1-205ENST00000506963 CATSPER3Q86XQ3 398 aa10.9□□□□□ -0.66
SFXN1-205ENST00000506963 C7orf61Q8IZ16 206 aa10.9□□□□□ -0.66
SFXN1-205ENST00000506963 BANK1Q8NDB2 785 aa10.9□□□□□ -0.66
SFXN1-205ENST00000506963 DHX38Q92620 1227 aaKnown RBP10.9□□□□□ -0.66
SFXN1-205ENST00000506963 TRIM43Q96BQ3 446 aaPredicted RBP10.9□□□□□ -0.66
SFXN1-205ENST00000506963 DYDC2Q96IM9 177 aa10.9□□□□□ -0.66
SFXN1-205ENST00000506963 NOC4LQ9BVI4 516 aaKnown RBP10.9□□□□□ -0.66
SFXN1-205ENST00000506963 ANKEF1Q9NU02 776 aa10.9□□□□□ -0.66
SFXN1-205ENST00000506963 TMEM39AQ9NV64 488 aa10.9□□□□□ -0.66
SFXN1-205ENST00000506963 TUBE1Q9UJT0 475 aa10.9□□□□□ -0.66
SFXN1-205ENST00000506963 FBXO2Q9UK22 296 aaPredicted RBP10.9□□□□□ -0.66
SFXN1-205ENST00000506963 CFAP45Q9UL16 551 aa10.9□□□□□ -0.66
SFXN1-205ENST00000506963 PCDHA2Q9Y5H9 948 aa10.9□□□□□ -0.66
SFXN1-205ENST00000506963 MKI67P46013 3256 aaKnown RBP10.9□□□□□ -0.67
SFXN1-205ENST00000506963 LOXHD1Q8IVV2 1947 aa10.9□□□□□ -0.67
SFXN1-205ENST00000506963 IGKV6-21A0A0C4DH24 114 aa10.89□□□□□ -0.67
SFXN1-205ENST00000506963 SMIM35A0A1B0GVV1 85 aa10.89□□□□□ -0.67
SFXN1-205ENST00000506963 VWA3AA6NCI4 1184 aa10.89□□□□□ -0.67
SFXN1-205ENST00000506963 MAGEB2O15479 319 aa10.89□□□□□ -0.67
SFXN1-205ENST00000506963 MED24O75448 989 aa10.89□□□□□ -0.67
SFXN1-205ENST00000506963 C22orf31O95567 290 aa10.89□□□□□ -0.67
SFXN1-205ENST00000506963 TIMP1P01033 207 aa10.89□□□□□ -0.67
SFXN1-205ENST00000506963 YWHABP31946 246 aaKnown RBP10.89□□□□□ -0.67
SFXN1-205ENST00000506963 CHMP4BP1P59074 171 aa10.89□□□□□ -0.67
SFXN1-205ENST00000506963 ZNF200P98182 395 aaPredicted RBP10.89□□□□□ -0.67
SFXN1-205ENST00000506963 CYP4A11Q02928 519 aa10.89□□□□□ -0.67
SFXN1-205ENST00000506963 BFSP2Q13515 415 aa10.89□□□□□ -0.67
SFXN1-205ENST00000506963 CTTNQ14247 550 aaKnown RBP10.89□□□□□ -0.67
SFXN1-205ENST00000506963 MTHFD1LQ6UB35 978 aa10.89□□□□□ -0.67
SFXN1-205ENST00000506963 OTUD6AQ7L8S5 288 aa10.89□□□□□ -0.67
SFXN1-205ENST00000506963 SH3RF1Q7Z6J0 888 aa10.89□□□□□ -0.67
SFXN1-205ENST00000506963 TPH2Q8IWU9 490 aa10.89□□□□□ -0.67
SFXN1-205ENST00000506963 CKAP2LQ8IYA6 745 aa10.89□□□□□ -0.67
SFXN1-205ENST00000506963 CCDC155Q8N6L0 562 aa10.89□□□□□ -0.67
SFXN1-205ENST00000506963 LINC01465Q8N7H1 131 aa10.89□□□□□ -0.67
SFXN1-205ENST00000506963 PPP1R13LQ8WUF5 828 aa10.89□□□□□ -0.67
SFXN1-205ENST00000506963 MMTAG2Q9BU76 263 aaKnown RBP10.89□□□□□ -0.67
SFXN1-205ENST00000506963 DAXXQ9UER7 740 aaPredicted RBP10.89□□□□□ -0.67
SFXN1-205ENST00000506963 DBR1Q9UK59 544 aaKnown RBP10.89□□□□□ -0.67
SFXN1-205ENST00000506963 RCOR1Q9UKL0 485 aa10.89□□□□□ -0.67
SFXN1-205ENST00000506963 NOD1Q9Y239 953 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms