RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 ATP8B4Q8TF62 1192 aa22.37■■□□□ 1.17
SNX25-204ENST00000506896 LMBR1Q8WVP7 490 aa22.37■■□□□ 1.17
SNX25-204ENST00000506896 SETD4Q9NVD3 440 aa22.37■■□□□ 1.17
SNX25-204ENST00000506896 GABBR1Q9UBS5 961 aa22.37■■□□□ 1.17
SNX25-204ENST00000506896 VAV3Q9UKW4 847 aa22.37■■□□□ 1.17
SNX25-204ENST00000506896 IGSF9BQ9UPX0 1349 aa22.36■■□□□ 1.17
SNX25-204ENST00000506896 HBP1O60381 514 aa22.36■■□□□ 1.17
SNX25-204ENST00000506896 HSP90AA1P07900 732 aaKnown RBP22.36■■□□□ 1.17
SNX25-204ENST00000506896 RFC2P35250 354 aa22.36■■□□□ 1.17
SNX25-204ENST00000506896 ADAM17P78536 824 aa22.36■■□□□ 1.17
SNX25-204ENST00000506896 ZNF200P98182 395 aaPredicted RBP22.36■■□□□ 1.17
SNX25-204ENST00000506896 GRIK4Q16099 956 aa22.36■■□□□ 1.17
SNX25-204ENST00000506896 RILPL1Q5EBL4 403 aa22.36■■□□□ 1.17
SNX25-204ENST00000506896 CKAP2LQ8IYA6 745 aa22.36■■□□□ 1.17
SNX25-204ENST00000506896 FAM167AQ96KS9 214 aa22.36■■□□□ 1.17
SNX25-204ENST00000506896 MTMR9Q96QG7 549 aa22.36■■□□□ 1.17
SNX25-204ENST00000506896 CXXC1Q9P0U4 656 aaPredicted RBP22.36■■□□□ 1.17
SNX25-204ENST00000506896 PCDHA12Q9UN75 941 aa22.36■■□□□ 1.17
SNX25-204ENST00000506896 WNT7AO00755 349 aa22.35■■□□□ 1.17
SNX25-204ENST00000506896 PFKMP08237 780 aa22.35■■□□□ 1.17
SNX25-204ENST00000506896 GPNMBQ14956 572 aa22.35■■□□□ 1.17
SNX25-204ENST00000506896 TRIM71Q2Q1W2 868 aaKnown RBP22.35■■□□□ 1.17
SNX25-204ENST00000506896 OTOP2Q7RTS6 562 aa22.35■■□□□ 1.17
SNX25-204ENST00000506896 BBXQ8WY36 941 aaPredicted RBP22.35■■□□□ 1.17
SNX25-204ENST00000506896 MYH9P35579 1960 aaKnown RBP22.34■■□□□ 1.17
SNX25-204ENST00000506896 TREHO43280 583 aa22.34■■□□□ 1.17
SNX25-204ENST00000506896 RPLP2P05387 115 aaKnown RBP22.34■■□□□ 1.17
SNX25-204ENST00000506896 INSRRP14616 1297 aa22.34■■□□□ 1.17
SNX25-204ENST00000506896 ZNF174Q15697 407 aa22.34■■□□□ 1.17
SNX25-204ENST00000506896 TAF2Q6P1X5 1199 aa22.34■■□□□ 1.17
SNX25-204ENST00000506896 BRAPQ7Z569 592 aa22.34■■□□□ 1.17
SNX25-204ENST00000506896 WNT8BQ93098 351 aa22.34■■□□□ 1.17
SNX25-204ENST00000506896 TTC12Q9H892 705 aaPredicted RBP22.34■■□□□ 1.17
SNX25-204ENST00000506896 TUBE1Q9UJT0 475 aa22.34■■□□□ 1.17
SNX25-204ENST00000506896 CEP131Q9UPN4 1083 aa22.34■■□□□ 1.17
SNX25-204ENST00000506896 COL1A2P08123 1366 aa22.34■■□□□ 1.17
SNX25-204ENST00000506896 CDH23Q9H251 3354 aa22.34■■□□□ 1.17
SNX25-204ENST00000506896 MBLAC1A4D2B0 266 aaPredicted RBP22.33■■□□□ 1.17
SNX25-204ENST00000506896 VPS37CA5D8V6 355 aaPredicted RBP22.33■■□□□ 1.17
SNX25-204ENST00000506896 DKC1O60832 514 aaKnown RBP eCLIP22.33■■□□□ 1.17
SNX25-204ENST00000506896 CAND2O75155 1236 aa22.33■■□□□ 1.17
SNX25-204ENST00000506896 PARNO95453 639 aaKnown RBP22.33■■□□□ 1.17
SNX25-204ENST00000506896 CKBP12277 381 aa22.33■■□□□ 1.17
SNX25-204ENST00000506896 PDIA4P13667 645 aaKnown RBP22.33■■□□□ 1.17
SNX25-204ENST00000506896 SYT1P21579 422 aa22.33■■□□□ 1.17
SNX25-204ENST00000506896 TOB1P50616 345 aaPredicted RBP22.33■■□□□ 1.17
SNX25-204ENST00000506896 SPIRE1Q08AE8 756 aa22.33■■□□□ 1.17
SNX25-204ENST00000506896 ZNF484Q5JVG2 852 aa22.33■■□□□ 1.17
SNX25-204ENST00000506896 DEFB128Q7Z7B8 93 aa22.33■■□□□ 1.17
SNX25-204ENST00000506896 TTYH1Q9H313 450 aaPredicted RBP22.33■■□□□ 1.17
SNX25-204ENST00000506896 SEMA6BQ9H3T3 888 aa22.33■■□□□ 1.17
SNX25-204ENST00000506896 NRBP2Q9NSY0 501 aa22.33■■□□□ 1.17
SNX25-204ENST00000506896 GRXCR1A8MXD5 290 aa22.32■■□□□ 1.16
SNX25-204ENST00000506896 OR52Z1P0C646 297 aa22.32■■□□□ 1.16
SNX25-204ENST00000506896 SELPP16109 830 aa22.32■■□□□ 1.16
SNX25-204ENST00000506896 ATP4AP20648 1035 aa22.32■■□□□ 1.16
SNX25-204ENST00000506896 TXKP42681 527 aa22.32■■□□□ 1.16
SNX25-204ENST00000506896 EPHA7Q15375 998 aa22.32■■□□□ 1.16
SNX25-204ENST00000506896 ZNF697Q5TEC3 545 aa22.32■■□□□ 1.16
SNX25-204ENST00000506896 TRAF7Q6Q0C0 670 aa22.32■■□□□ 1.16
SNX25-204ENST00000506896 MTIF3Q9H2K0 278 aaKnown RBP22.32■■□□□ 1.16
SNX25-204ENST00000506896 TMEM60Q9H2L4 133 aa22.32■■□□□ 1.16
SNX25-204ENST00000506896 FOXD4L1Q9NU39 408 aa22.32■■□□□ 1.16
SNX25-204ENST00000506896 GBF1Q92538 1859 aa22.31■■□□□ 1.16
SNX25-204ENST00000506896 TMEM265A0A087WTH1 108 aa22.31■■□□□ 1.16
SNX25-204ENST00000506896 EML1O00423 815 aa22.31■■□□□ 1.16
SNX25-204ENST00000506896 LAD1O00515 517 aa22.31■■□□□ 1.16
SNX25-204ENST00000506896 OATP04181 439 aa22.31■■□□□ 1.16
SNX25-204ENST00000506896 P4HBP07237 508 aaKnown RBP22.31■■□□□ 1.16
SNX25-204ENST00000506896 PSMC5P62195 406 aa22.31■■□□□ 1.16
SNX25-204ENST00000506896 IGBP1P78318 339 aa22.31■■□□□ 1.16
SNX25-204ENST00000506896 PRKCEQ02156 737 aa22.31■■□□□ 1.16
SNX25-204ENST00000506896 MARCH8Q5T0T0 291 aa22.31■■□□□ 1.16
SNX25-204ENST00000506896 NCAPH2Q6IBW4 605 aa22.31■■□□□ 1.16
SNX25-204ENST00000506896 LRRC8DQ7L1W4 858 aa22.31■■□□□ 1.16
SNX25-204ENST00000506896 RPAINQ86UA6 219 aa22.31■■□□□ 1.16
SNX25-204ENST00000506896 GUCD1Q96NT3 240 aa22.31■■□□□ 1.16
SNX25-204ENST00000506896 WDR81Q562E7 1941 aa22.3■■□□□ 1.16
SNX25-204ENST00000506896 ZNF862O60290 1169 aa22.3■■□□□ 1.16
SNX25-204ENST00000506896 CXCL10P02778 98 aa22.3■■□□□ 1.16
SNX25-204ENST00000506896 DNAJB2P25686 324 aa22.3■■□□□ 1.16
SNX25-204ENST00000506896 THPOP40225 353 aa22.3■■□□□ 1.16
SNX25-204ENST00000506896 QARSP47897 775 aaKnown RBP22.3■■□□□ 1.16
SNX25-204ENST00000506896 UGCGQ16739 394 aa22.3■■□□□ 1.16
SNX25-204ENST00000506896 RSPH3Q86UC2 560 aa22.3■■□□□ 1.16
SNX25-204ENST00000506896 NEK9Q8TD19 979 aa22.3■■□□□ 1.16
SNX25-204ENST00000506896 FAM161BQ96MY7 647 aa22.3■■□□□ 1.16
SNX25-204ENST00000506896 PBX4Q9BYU1 374 aa22.3■■□□□ 1.16
SNX25-204ENST00000506896 PCDHB6Q9Y5E3 794 aa22.3■■□□□ 1.16
SNX25-204ENST00000506896 CHD9Q3L8U1 2897 aa22.29■■□□□ 1.16
SNX25-204ENST00000506896 NBR1Q14596 966 aa22.29■■□□□ 1.16
SNX25-204ENST00000506896 TMEM266Q2M3C6 531 aa22.29■■□□□ 1.16
SNX25-204ENST00000506896 XKR3Q5GH77 459 aa22.29■■□□□ 1.16
SNX25-204ENST00000506896 ZNF618Q5T7W0 954 aa22.29■■□□□ 1.16
SNX25-204ENST00000506896 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.29■■□□□ 1.16
SNX25-204ENST00000506896 STXBP5LQ9Y2K9 1186 aa22.29■■□□□ 1.16
SNX25-204ENST00000506896 PCDHA2Q9Y5H9 948 aa22.29■■□□□ 1.16
SNX25-204ENST00000506896 MYO9BQ13459 2157 aa22.29■■□□□ 1.16
SNX25-204ENST00000506896 STX6O43752 255 aa22.28■■□□□ 1.16
SNX25-204ENST00000506896 NBNO60934 754 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms