RNA–Protein interactions for RNA: ENST00000506891.1

TTC39B-205, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-205ENST00000506891 PPFIA3O75145 1194 aa13.71□□□□□ -0.21
TTC39B-205ENST00000506891 PSAPP07602 524 aa13.71□□□□□ -0.21
TTC39B-205ENST00000506891 TAP1Q03518 808 aa13.71□□□□□ -0.21
TTC39B-205ENST00000506891 TRIM29Q14134 588 aa13.71□□□□□ -0.21
TTC39B-205ENST00000506891 TCTN1Q2MV58 587 aa13.71□□□□□ -0.21
TTC39B-205ENST00000506891 SWSAP1Q6NVH7 229 aa13.71□□□□□ -0.21
TTC39B-205ENST00000506891 PDXDC2PQ6P474 469 aa13.71□□□□□ -0.21
TTC39B-205ENST00000506891 RUFY4Q6ZNE9 571 aa13.71□□□□□ -0.21
TTC39B-205ENST00000506891 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.71□□□□□ -0.21
TTC39B-205ENST00000506891 NSUN7Q8NE18 718 aaKnown RBP13.71□□□□□ -0.21
TTC39B-205ENST00000506891 RASGRP4Q8TDF6 673 aa13.71□□□□□ -0.21
TTC39B-205ENST00000506891 TBCKQ8TEA7 893 aa13.71□□□□□ -0.21
TTC39B-205ENST00000506891 ATP8B4Q8TF62 1192 aa13.71□□□□□ -0.21
TTC39B-205ENST00000506891 DNAJB3Q8WWF6 145 aa13.71□□□□□ -0.21
TTC39B-205ENST00000506891 TOP1MTQ969P6 601 aa13.71□□□□□ -0.21
TTC39B-205ENST00000506891 LENG9Q96B70 501 aa13.71□□□□□ -0.21
TTC39B-205ENST00000506891 KIF2CQ99661 725 aa13.71□□□□□ -0.21
TTC39B-205ENST00000506891 TRIP12Q14669 1992 aaPredicted RBP13.71□□□□□ -0.22
TTC39B-205ENST00000506891 COL1A2P08123 1366 aa13.71□□□□□ -0.22
TTC39B-205ENST00000506891 DOCK5Q9H7D0 1870 aa13.7□□□□□ -0.22
TTC39B-205ENST00000506891 WDR64B1ANS9 1081 aa13.7□□□□□ -0.22
TTC39B-205ENST00000506891 DDX39AO00148 427 aaKnown RBP13.7□□□□□ -0.22
TTC39B-205ENST00000506891 EDIL3O43854 480 aa13.7□□□□□ -0.22
TTC39B-205ENST00000506891 CTSHP09668 335 aa13.7□□□□□ -0.22
TTC39B-205ENST00000506891 IGFBP4P22692 258 aa13.7□□□□□ -0.22
TTC39B-205ENST00000506891 JAK3P52333 1124 aa13.7□□□□□ -0.22
TTC39B-205ENST00000506891 IGBP1P78318 339 aa13.7□□□□□ -0.22
TTC39B-205ENST00000506891 DEFB103AP81534 67 aa13.7□□□□□ -0.22
TTC39B-205ENST00000506891 MGAT3Q09327 533 aa13.7□□□□□ -0.22
TTC39B-205ENST00000506891 ADGRE1Q14246 886 aa13.7□□□□□ -0.22
TTC39B-205ENST00000506891 MTHFD1LQ6UB35 978 aa13.7□□□□□ -0.22
TTC39B-205ENST00000506891 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.7□□□□□ -0.22
TTC39B-205ENST00000506891 BBXQ8WY36 941 aaPredicted RBP13.7□□□□□ -0.22
TTC39B-205ENST00000506891 SLC5A5Q92911 643 aa13.7□□□□□ -0.22
TTC39B-205ENST00000506891 FAM167AQ96KS9 214 aa13.7□□□□□ -0.22
TTC39B-205ENST00000506891 FAM20AQ96MK3 541 aa13.7□□□□□ -0.22
TTC39B-205ENST00000506891 IFIH1Q9BYX4 1025 aaKnown RBP13.7□□□□□ -0.22
TTC39B-205ENST00000506891 KIF3AQ9Y496 699 aa13.7□□□□□ -0.22
TTC39B-205ENST00000506891 COL6A3P12111 3177 aa13.69□□□□□ -0.22
TTC39B-205ENST00000506891 M0QZ92 97 aa13.69□□□□□ -0.22
TTC39B-205ENST00000506891 MSH4O15457 936 aa13.69□□□□□ -0.22
TTC39B-205ENST00000506891 GTPBP6O43824 516 aaPredicted RBP13.69□□□□□ -0.22
TTC39B-205ENST00000506891 FDPSP14324 419 aaKnown RBP13.69□□□□□ -0.22
TTC39B-205ENST00000506891 KLRC1P26715 233 aa13.69□□□□□ -0.22
TTC39B-205ENST00000506891 KRT2P35908 639 aa13.69□□□□□ -0.22
TTC39B-205ENST00000506891 MRPS6P82932 125 aaKnown RBP13.69□□□□□ -0.22
TTC39B-205ENST00000506891 HTRA4P83105 476 aaPredicted RBP13.69□□□□□ -0.22
TTC39B-205ENST00000506891 FBXO47Q5MNV8 452 aa13.69□□□□□ -0.22
TTC39B-205ENST00000506891 NEK8Q86SG6 692 aa13.69□□□□□ -0.22
TTC39B-205ENST00000506891 NRBP2Q9NSY0 501 aa13.69□□□□□ -0.22
TTC39B-205ENST00000506891 LMCD1Q9NZU5 365 aa13.69□□□□□ -0.22
TTC39B-205ENST00000506891 CEP131Q9UPN4 1083 aa13.69□□□□□ -0.22
TTC39B-205ENST00000506891 KDM3AQ9Y4C1 1321 aa13.68□□□□□ -0.22
TTC39B-205ENST00000506891 DLL1O00548 723 aa13.68□□□□□ -0.22
TTC39B-205ENST00000506891 ENPP3O14638 875 aa13.68□□□□□ -0.22
TTC39B-205ENST00000506891 MAGEB2O15479 319 aa13.68□□□□□ -0.22
TTC39B-205ENST00000506891 GAS7O60861 476 aa13.68□□□□□ -0.22
TTC39B-205ENST00000506891 MMP1P03956 469 aa13.68□□□□□ -0.22
TTC39B-205ENST00000506891 ATP4AP20648 1035 aa13.68□□□□□ -0.22
TTC39B-205ENST00000506891 ERVK-21P61565 698 aa13.68□□□□□ -0.22
TTC39B-205ENST00000506891 ORC2Q13416 577 aaPredicted RBP13.68□□□□□ -0.22
TTC39B-205ENST00000506891 LPIN1Q14693 890 aa13.68□□□□□ -0.22
TTC39B-205ENST00000506891 SAFBQ15424 915 aaKnown RBP eCLIP13.68□□□□□ -0.22
TTC39B-205ENST00000506891 ODR4Q5SWX8 454 aa13.68□□□□□ -0.22
TTC39B-205ENST00000506891 TSHZ1Q6ZSZ6 1077 aa13.68□□□□□ -0.22
TTC39B-205ENST00000506891 CCDC60Q8IWA6 550 aaPredicted RBP13.68□□□□□ -0.22
TTC39B-205ENST00000506891 MYOCDQ8IZQ8 938 aa13.68□□□□□ -0.22
TTC39B-205ENST00000506891 TGS1Q96RS0 853 aaKnown RBP13.68□□□□□ -0.22
TTC39B-205ENST00000506891 TEKT3Q9BXF9 490 aa13.68□□□□□ -0.22
TTC39B-205ENST00000506891 FTHL17Q9BXU8 183 aa13.68□□□□□ -0.22
TTC39B-205ENST00000506891 CELF4Q9BZC1 486 aaKnown RBP13.68□□□□□ -0.22
TTC39B-205ENST00000506891 TSPYL2Q9H2G4 693 aaPredicted RBP13.68□□□□□ -0.22
TTC39B-205ENST00000506891 DISC1Q9NRI5 854 aa13.68□□□□□ -0.22
TTC39B-205ENST00000506891 TRPV2Q9Y5S1 764 aa13.68□□□□□ -0.22
TTC39B-205ENST00000506891 CDY2AQ9Y6F7 541 aa13.68□□□□□ -0.22
TTC39B-205ENST00000506891 MYH9P35579 1960 aaKnown RBP13.67□□□□□ -0.22
TTC39B-205ENST00000506891 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.67□□□□□ -0.22
TTC39B-205ENST00000506891 DKC1O60832 514 aaKnown RBP eCLIP13.67□□□□□ -0.22
TTC39B-205ENST00000506891 LARGE1O95461 756 aa13.67□□□□□ -0.22
TTC39B-205ENST00000506891 GHRP10912 638 aa13.67□□□□□ -0.22
TTC39B-205ENST00000506891 LRCH2Q5VUJ6 765 aa13.67□□□□□ -0.22
TTC39B-205ENST00000506891 B3GNT9Q6UX72 402 aa13.67□□□□□ -0.22
TTC39B-205ENST00000506891 CKAP2LQ8IYA6 745 aa13.67□□□□□ -0.22
TTC39B-205ENST00000506891 SLFN12Q8IYM2 578 aa13.67□□□□□ -0.22
TTC39B-205ENST00000506891 KIAA0319LQ8IZA0 1049 aa13.67□□□□□ -0.22
TTC39B-205ENST00000506891 NECAB1Q8N987 351 aa13.67□□□□□ -0.22
TTC39B-205ENST00000506891 SP7Q8TDD2 431 aaPredicted RBP13.67□□□□□ -0.22
TTC39B-205ENST00000506891 ARNTL2Q8WYA1 636 aa13.67□□□□□ -0.22
TTC39B-205ENST00000506891 TBC1D32Q96NH3 1257 aa13.67□□□□□ -0.22
TTC39B-205ENST00000506891 AIFM3Q96NN9 605 aa13.67□□□□□ -0.22
TTC39B-205ENST00000506891 SAMD11Q96NU1 681 aa13.67□□□□□ -0.22
TTC39B-205ENST00000506891 OSBPL7Q9BZF2 842 aa13.67□□□□□ -0.22
TTC39B-205ENST00000506891 GABBR1Q9UBS5 961 aa13.67□□□□□ -0.22
TTC39B-205ENST00000506891 DDX25Q9UHL0 483 aaKnown RBP13.67□□□□□ -0.22
TTC39B-205ENST00000506891 KCNJ14Q9UNX9 436 aa13.67□□□□□ -0.22
TTC39B-205ENST00000506891 SAMM50Q9Y512 469 aa13.67□□□□□ -0.22
TTC39B-205ENST00000506891 PPME1Q9Y570 386 aa13.67□□□□□ -0.22
TTC39B-205ENST00000506891 IGSF9BQ9UPX0 1349 aa13.66□□□□□ -0.22
TTC39B-205ENST00000506891 LINC01553A4QN01 128 aa13.66□□□□□ -0.22
TTC39B-205ENST00000506891 PSMD10O75832 226 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms