RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ZNF746Q6NUN9 644 aaPredicted RBP10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 CPLX2Q6PUV4 134 aaKnown RBP10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 POTEBQ6S5H4 581 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 RSPH3Q86UC2 560 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 SP7Q8TDD2 431 aaPredicted RBP10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 ATP8B4Q8TF62 1192 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 DNAJB3Q8WWF6 145 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 APBB2Q92870 758 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 TNPO1Q92973 898 aaKnown RBP10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 ZBTB10Q96DT7 871 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 AIFM3Q96NN9 605 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 ZNF577Q9BSK1 485 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 IFIH1Q9BYX4 1025 aaKnown RBP10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 TPCN1Q9ULQ1 816 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 PCDHA4Q9UN74 947 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 TRPC6Q9Y210 931 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 PCDHA2Q9Y5H9 948 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 STK36Q9NRP7 1315 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 TRANK1O15050 2925 aa10.3□□□□□ -0.76
PDLIM5-209ENST00000506632 COL1A2P08123 1366 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 COL4A4P53420 1690 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 CYP3A7-CYP3A51PA0A087WV96 503 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 SMIM35A0A1B0GVV1 85 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 LINC01553A4QN01 128 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 ZBTB42B2RXF5 422 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 DLL1O00548 723 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 MSH4O15457 936 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 HBP1O60381 514 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 LPXNO60711 386 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 AMHP03971 560 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 GHRP10912 638 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 CYP3A7P24462 503 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 AK2P54819 239 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 IGBP1P78318 339 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 MRPS6P82932 125 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 KRT76Q01546 638 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 FBXO47Q5MNV8 452 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 FAM160B1Q5W0V3 765 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 GALNT17Q6IS24 598 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 MIS18BP1Q6P0N0 1132 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 SMAP1Q8IYB5 467 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 MYOCDQ8IZQ8 938 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 BLIDQ8IZY5 108 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 TBCKQ8TEA7 893 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 TRAPPC12Q8WVT3 735 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 TOP1MTQ969P6 601 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 MBOAT7Q96N66 472 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 ZBED2Q9BTP6 218 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 C22orf23Q9BZE7 217 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 CERS4Q9HA82 394 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 ZNF302Q9NR11 478 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 INSL6Q9Y581 213 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 MAFBQ9Y5Q3 323 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 MTCH2Q9Y6C9 303 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 CDY2AQ9Y6F7 541 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 SQORQ9Y6N5 450 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 IGSF9BQ9UPX0 1349 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 KDM3AQ9Y4C1 1321 aa10.29□□□□□ -0.76
PDLIM5-209ENST00000506632 RFXAPO00287 272 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 BACH1O14867 736 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 CDKL5O76039 1030 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 CTDNEP1O95476 244 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 IGFBP4P22692 258 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 ERVK-21P61565 698 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 ANKRD1Q15327 319 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 Q4G0T1 1027 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 SWSAP1Q6NVH7 229 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 PDXDC2PQ6P474 469 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 MTHFD1LQ6UB35 978 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 MOXD1Q6UVY6 613 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 B3GNT9Q6UX72 402 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 ARNTL2Q8WYA1 636 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 SLC5A5Q92911 643 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 UIMC1Q96RL1 719 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 RIT2Q99578 217 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 PHF20Q9BVI0 1012 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 COL25A1Q9BXS0 654 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 FAM49AQ9H0Q0 323 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 SLKQ9H2G2 1235 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 AGO3Q9H9G7 860 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 RC3H2Q9HBD1 1191 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 PRDM6Q9NQX0 595 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 PCDHA10Q9Y5I2 948 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 WDR81Q562E7 1941 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 MYH9P35579 1960 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 TTC3P53804 2025 aa10.28□□□□□ -0.76
PDLIM5-209ENST00000506632 A0A0C4DFX4 3053 aa10.27□□□□□ -0.76
PDLIM5-209ENST00000506632 UNC80Q8N2C7 3258 aa10.27□□□□□ -0.76
PDLIM5-209ENST00000506632 WDR64B1ANS9 1081 aa10.27□□□□□ -0.77
PDLIM5-209ENST00000506632 STK25O00506 426 aa10.27□□□□□ -0.77
PDLIM5-209ENST00000506632 EIF5BO60841 1220 aaKnown RBP10.27□□□□□ -0.77
PDLIM5-209ENST00000506632 PSMD10O75832 226 aa10.27□□□□□ -0.77
PDLIM5-209ENST00000506632 LARGE1O95461 756 aa10.27□□□□□ -0.77
PDLIM5-209ENST00000506632 SEC24BO95487 1268 aa10.27□□□□□ -0.77
PDLIM5-209ENST00000506632 C22orf31O95567 290 aa10.27□□□□□ -0.77
PDLIM5-209ENST00000506632 PSAPP07602 524 aa10.27□□□□□ -0.77
PDLIM5-209ENST00000506632 KLRC1P26715 233 aa10.27□□□□□ -0.77
PDLIM5-209ENST00000506632 GRB10Q13322 594 aa10.27□□□□□ -0.77
PDLIM5-209ENST00000506632 ZNF484Q5JVG2 852 aa10.27□□□□□ -0.77
PDLIM5-209ENST00000506632 IER5Q5VY09 327 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms