RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 U2AF2P26368 475 aaKnown RBP eCLIP20.12■□□□□ 0.81
SMN1-204ENST00000506163 SPIRE1Q08AE8 756 aa20.12■□□□□ 0.81
SMN1-204ENST00000506163 PSRC1Q6PGN9 363 aaPredicted RBP20.12■□□□□ 0.81
SMN1-204ENST00000506163 MIER3Q7Z3K6 550 aa20.12■□□□□ 0.81
SMN1-204ENST00000506163 RPUSD2Q8IZ73 545 aaKnown RBP20.12■□□□□ 0.81
SMN1-204ENST00000506163 TMEM60Q9H2L4 133 aa20.12■□□□□ 0.81
SMN1-204ENST00000506163 TUBE1Q9UJT0 475 aa20.12■□□□□ 0.81
SMN1-204ENST00000506163 RRN3P2A6NIE6 340 aa20.11■□□□□ 0.81
SMN1-204ENST00000506163 TBX3O15119 743 aa20.11■□□□□ 0.81
SMN1-204ENST00000506163 HBP1O60381 514 aa20.11■□□□□ 0.81
SMN1-204ENST00000506163 CXCL10P02778 98 aa20.11■□□□□ 0.81
SMN1-204ENST00000506163 RFC2P35250 354 aa20.11■□□□□ 0.81
SMN1-204ENST00000506163 JAK3P52333 1124 aa20.11■□□□□ 0.81
SMN1-204ENST00000506163 PPP2R5CQ13362 524 aa20.11■□□□□ 0.81
SMN1-204ENST00000506163 NOSTRINQ8IVI9 506 aa20.11■□□□□ 0.81
SMN1-204ENST00000506163 MTMR9Q96QG7 549 aa20.11■□□□□ 0.81
SMN1-204ENST00000506163 NAP1L4Q99733 375 aaKnown RBP20.11■□□□□ 0.81
SMN1-204ENST00000506163 GRXCR1A8MXD5 290 aa20.1■□□□□ 0.81
SMN1-204ENST00000506163 RSPH10B2B2RC85 870 aa20.1■□□□□ 0.81
SMN1-204ENST00000506163 CHRNA1P02708 482 aa20.1■□□□□ 0.81
SMN1-204ENST00000506163 CTSHP09668 335 aa20.1■□□□□ 0.81
SMN1-204ENST00000506163 RSPH10BP0C881 870 aa20.1■□□□□ 0.81
SMN1-204ENST00000506163 SFNP31947 248 aa20.1■□□□□ 0.81
SMN1-204ENST00000506163 TOB1P50616 345 aaPredicted RBP20.1■□□□□ 0.81
SMN1-204ENST00000506163 MTHFD1LQ6UB35 978 aa20.1■□□□□ 0.81
SMN1-204ENST00000506163 RPAINQ86UA6 219 aa20.1■□□□□ 0.81
SMN1-204ENST00000506163 DNAJB3Q8WWF6 145 aa20.1■□□□□ 0.81
SMN1-204ENST00000506163 TCEAL9Q9UHQ7 104 aa20.1■□□□□ 0.81
SMN1-204ENST00000506163 KLRC1P26715 233 aa20.1■□□□□ 0.81
SMN1-204ENST00000506163 MCM7P33993 719 aa20.1■□□□□ 0.81
SMN1-204ENST00000506163 NBR1Q14596 966 aa20.1■□□□□ 0.81
SMN1-204ENST00000506163 ZNF174Q15697 407 aa20.1■□□□□ 0.81
SMN1-204ENST00000506163 FAM26DQ5JW98 314 aa20.1■□□□□ 0.81
SMN1-204ENST00000506163 TAF2Q6P1X5 1199 aa20.1■□□□□ 0.81
SMN1-204ENST00000506163 CKAP2LQ8IYA6 745 aa20.1■□□□□ 0.81
SMN1-204ENST00000506163 RDM1Q8NG50 284 aa20.1■□□□□ 0.81
SMN1-204ENST00000506163 BBXQ8WY36 941 aaPredicted RBP20.1■□□□□ 0.81
SMN1-204ENST00000506163 SMC3Q9UQE7 1217 aa20.1■□□□□ 0.81
SMN1-204ENST00000506163 PCDHA2Q9Y5H9 948 aa20.1■□□□□ 0.81
SMN1-204ENST00000506163 TMEM150BA6NC51 233 aa20.09■□□□□ 0.81
SMN1-204ENST00000506163 PFKMP08237 780 aa20.09■□□□□ 0.81
SMN1-204ENST00000506163 PRKCEQ02156 737 aa20.09■□□□□ 0.81
SMN1-204ENST00000506163 MGAT3Q09327 533 aa20.09■□□□□ 0.81
SMN1-204ENST00000506163 CALCRLQ16602 461 aa20.09■□□□□ 0.81
SMN1-204ENST00000506163 BANK1Q8NDB2 785 aa20.09■□□□□ 0.81
SMN1-204ENST00000506163 FTOQ9C0B1 505 aaKnown RBP eCLIP20.09■□□□□ 0.81
SMN1-204ENST00000506163 FAM49AQ9H0Q0 323 aaPredicted RBP20.09■□□□□ 0.81
SMN1-204ENST00000506163 WRAP73Q9P2S5 460 aaPredicted RBP20.09■□□□□ 0.81
SMN1-204ENST00000506163 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.09■□□□□ 0.81
SMN1-204ENST00000506163 EVPLQ92817 2033 aa20.08■□□□□ 0.81
SMN1-204ENST00000506163 NEMFO60524 1076 aa20.08■□□□□ 0.8
SMN1-204ENST00000506163 CAND2O75155 1236 aa20.08■□□□□ 0.8
SMN1-204ENST00000506163 C22orf31O95567 290 aa20.08■□□□□ 0.8
SMN1-204ENST00000506163 ZNF484Q5JVG2 852 aa20.08■□□□□ 0.8
SMN1-204ENST00000506163 SLFN12Q8IYM2 578 aa20.08■□□□□ 0.8
SMN1-204ENST00000506163 C4orf32Q8N8J7 132 aa20.08■□□□□ 0.8
SMN1-204ENST00000506163 CEP89Q96ST8 783 aa20.08■□□□□ 0.8
SMN1-204ENST00000506163 OATP04181 439 aa20.07■□□□□ 0.8
SMN1-204ENST00000506163 KIAA0319LQ8IZA0 1049 aa20.07■□□□□ 0.8
SMN1-204ENST00000506163 TNPO1Q92973 898 aaKnown RBP20.07■□□□□ 0.8
SMN1-204ENST00000506163 SH2D3AQ9BRG2 576 aa20.07■□□□□ 0.8
SMN1-204ENST00000506163 TTC12Q9H892 705 aaPredicted RBP20.07■□□□□ 0.8
SMN1-204ENST00000506163 RGL1Q9NZL6 768 aa20.07■□□□□ 0.8
SMN1-204ENST00000506163 COL1A2P08123 1366 aa20.06■□□□□ 0.8
SMN1-204ENST00000506163 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.06■□□□□ 0.8
SMN1-204ENST00000506163 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.06■□□□□ 0.8
SMN1-204ENST00000506163 MARCH6O60337 910 aa20.06■□□□□ 0.8
SMN1-204ENST00000506163 BAG4O95429 457 aaKnown RBP20.06■□□□□ 0.8
SMN1-204ENST00000506163 PARNO95453 639 aaKnown RBP20.06■□□□□ 0.8
SMN1-204ENST00000506163 TXKP42681 527 aa20.06■□□□□ 0.8
SMN1-204ENST00000506163 SMAD3P84022 425 aaKnown RBP20.06■□□□□ 0.8
SMN1-204ENST00000506163 TMEM62Q0P6H9 643 aa20.06■□□□□ 0.8
SMN1-204ENST00000506163 TARBP2Q15633 366 aaKnown RBP20.06■□□□□ 0.8
SMN1-204ENST00000506163 TTC38Q5R3I4 469 aa20.06■□□□□ 0.8
SMN1-204ENST00000506163 NCAPH2Q6IBW4 605 aa20.06■□□□□ 0.8
SMN1-204ENST00000506163 DBF4BQ8NFT6 615 aa20.06■□□□□ 0.8
SMN1-204ENST00000506163 SNX21Q969T3 373 aa20.06■□□□□ 0.8
SMN1-204ENST00000506163 PCDHA12Q9UN75 941 aa20.06■□□□□ 0.8
SMN1-204ENST00000506163 KIF3AQ9Y496 699 aa20.06■□□□□ 0.8
SMN1-204ENST00000506163 PCDHB6Q9Y5E3 794 aa20.06■□□□□ 0.8
SMN1-204ENST00000506163 CDY2AQ9Y6F7 541 aa20.06■□□□□ 0.8
SMN1-204ENST00000506163 SIP14410 1827 aa20.06■□□□□ 0.8
SMN1-204ENST00000506163 SMIM35A0A1B0GVV1 85 aa20.05■□□□□ 0.8
SMN1-204ENST00000506163 ZBBXA8MT70 800 aa20.05■□□□□ 0.8
SMN1-204ENST00000506163 PBX2P40425 430 aa20.05■□□□□ 0.8
SMN1-204ENST00000506163 MKRN4PQ13434 485 aaPredicted RBP20.05■□□□□ 0.8
SMN1-204ENST00000506163 GNL2Q13823 731 aaKnown RBP20.05■□□□□ 0.8
SMN1-204ENST00000506163 EPHA7Q15375 998 aa20.05■□□□□ 0.8
SMN1-204ENST00000506163 PLEKHG4Q58EX7 1191 aa20.05■□□□□ 0.8
SMN1-204ENST00000506163 LARP1BQ659C4 914 aaKnown RBP20.05■□□□□ 0.8
SMN1-204ENST00000506163 MCTP1Q6DN14 999 aa20.05■□□□□ 0.8
SMN1-204ENST00000506163 ANO5Q75V66 913 aa20.05■□□□□ 0.8
SMN1-204ENST00000506163 Q7L0L9 218 aa20.05■□□□□ 0.8
SMN1-204ENST00000506163 LINC01465Q8N7H1 131 aa20.05■□□□□ 0.8
SMN1-204ENST00000506163 FAM167AQ96KS9 214 aa20.05■□□□□ 0.8
SMN1-204ENST00000506163 NIFKQ9BYG3 293 aaKnown RBP20.05■□□□□ 0.8
SMN1-204ENST00000506163 CDHR5Q9HBB8 845 aa20.05■□□□□ 0.8
SMN1-204ENST00000506163 NRBP2Q9NSY0 501 aa20.05■□□□□ 0.8
SMN1-204ENST00000506163 K7ELQ4 463 aaPredicted RBP20.04■□□□□ 0.8
SMN1-204ENST00000506163 ZBTB39O15060 712 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms