RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 EEF2KMTQ96G04 330 aa19.03■□□□□ 0.64
TRAPPC11-204ENST00000505676 CCDC42Q96M95 316 aa19.03■□□□□ 0.64
TRAPPC11-204ENST00000505676 PXMP2Q9NR77 195 aa19.03■□□□□ 0.64
TRAPPC11-204ENST00000505676 ARMCX3Q9UH62 379 aaPredicted RBP19.03■□□□□ 0.64
TRAPPC11-204ENST00000505676 DKC1O60832 514 aaKnown RBP eCLIP19.02■□□□□ 0.64
TRAPPC11-204ENST00000505676 RAD51AP2Q09MP3 1159 aa19.02■□□□□ 0.64
TRAPPC11-204ENST00000505676 SPA17Q15506 151 aa19.02■□□□□ 0.64
TRAPPC11-204ENST00000505676 SH3D19Q5HYK7 790 aa19.02■□□□□ 0.64
TRAPPC11-204ENST00000505676 CACNA2D4Q7Z3S7 1137 aa19.02■□□□□ 0.64
TRAPPC11-204ENST00000505676 NLRX1Q86UT6 975 aa19.02■□□□□ 0.64
TRAPPC11-204ENST00000505676 REPS2Q8NFH8 660 aa19.02■□□□□ 0.64
TRAPPC11-204ENST00000505676 CDHR1Q96JP9 859 aa19.02■□□□□ 0.64
TRAPPC11-204ENST00000505676 FGFBP2Q9BYJ0 223 aa19.02■□□□□ 0.64
TRAPPC11-204ENST00000505676 RNF146Q9NTX7 359 aa19.02■□□□□ 0.64
TRAPPC11-204ENST00000505676 GGA3Q9NZ52 723 aa19.02■□□□□ 0.64
TRAPPC11-204ENST00000505676 DHX15O43143 795 aaKnown RBP19.02■□□□□ 0.64
TRAPPC11-204ENST00000505676 CCND2P30279 289 aa19.02■□□□□ 0.64
TRAPPC11-204ENST00000505676 ARHGAP25P42331 645 aa19.02■□□□□ 0.64
TRAPPC11-204ENST00000505676 MUM1L1Q5H9M0 696 aa19.02■□□□□ 0.64
TRAPPC11-204ENST00000505676 MYCT1Q8N699 235 aa19.02■□□□□ 0.64
TRAPPC11-204ENST00000505676 TMEM174Q8WUU8 243 aa19.02■□□□□ 0.64
TRAPPC11-204ENST00000505676 RMDN3Q96TC7 470 aa19.02■□□□□ 0.64
TRAPPC11-204ENST00000505676 PDCD2LQ9BRP1 358 aa19.02■□□□□ 0.64
TRAPPC11-204ENST00000505676 HOXC10Q9NYD6 342 aa19.02■□□□□ 0.64
TRAPPC11-204ENST00000505676 MYO6Q9UM54 1294 aa19.02■□□□□ 0.64
TRAPPC11-204ENST00000505676 PHIPQ8WWQ0 1821 aa19.02■□□□□ 0.63
TRAPPC11-204ENST00000505676 GTPBP10A4D1E9 387 aaKnown RBP19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 LCA5LO95447 670 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 QARSP47897 775 aaKnown RBP19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 MAPK8IP2Q13387 824 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 ARHGEF16Q5VV41 709 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 PDXDC1Q6P996 788 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 HS2ST1Q7LGA3 356 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 CEP112Q8N8E3 955 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 PIGOQ8TEQ8 1089 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 ATG4CQ96DT6 458 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 NAPGQ99747 312 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 SENP7Q9BQF6 1050 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 LUC7LQ9NQ29 371 aaKnown RBP19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 PLCB1Q9NQ66 1216 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 ZHX2Q9Y6X8 837 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 USO1O60763 962 aaKnown RBP19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 NR3C1P04150 777 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 MYBP10242 640 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 KLK7P49862 253 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 CASP5P51878 434 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 SNRPFP62306 86 aaKnown RBP19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 MRPS9P82933 396 aaKnown RBP19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 ZNF569Q5MCW4 686 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 CATSPERGQ6ZRH7 1159 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 KIAA1328Q86T90 577 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 FAM178BQ8IXR5 827 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 C4orf19Q8IY42 314 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 TRPM4Q8TD43 1214 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 UBXN4Q92575 508 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 TEX13BQ9BXU2 312 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 FAM207AQ9NSI2 230 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 LARSQ9P2J5 1176 aaKnown RBP19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 FBXL5Q9UKA1 691 aa19.01■□□□□ 0.63
TRAPPC11-204ENST00000505676 WDR64B1ANS9 1081 aa19■□□□□ 0.63
TRAPPC11-204ENST00000505676 XRCC5P13010 732 aaKnown RBP19■□□□□ 0.63
TRAPPC11-204ENST00000505676 BAP1Q92560 729 aa19■□□□□ 0.63
TRAPPC11-204ENST00000505676 TAAR1Q96RJ0 339 aa19■□□□□ 0.63
TRAPPC11-204ENST00000505676 ASTN1O14525 1302 aa19■□□□□ 0.63
TRAPPC11-204ENST00000505676 AFPP02771 609 aaKnown RBP19■□□□□ 0.63
TRAPPC11-204ENST00000505676 VAV2P52735 878 aa19■□□□□ 0.63
TRAPPC11-204ENST00000505676 ZNF746Q6NUN9 644 aaPredicted RBP19■□□□□ 0.63
TRAPPC11-204ENST00000505676 ZNF720Q7Z2F6 126 aa19■□□□□ 0.63
TRAPPC11-204ENST00000505676 FMNL3Q8IVF7 1028 aa19■□□□□ 0.63
TRAPPC11-204ENST00000505676 NSUN6Q8TEA1 469 aaKnown RBP19■□□□□ 0.63
TRAPPC11-204ENST00000505676 IWS1Q96ST2 819 aa19■□□□□ 0.63
TRAPPC11-204ENST00000505676 ANKEF1Q9NU02 776 aa19■□□□□ 0.63
TRAPPC11-204ENST00000505676 CDC23Q9UJX2 597 aa19■□□□□ 0.63
TRAPPC11-204ENST00000505676 REXO2Q9Y3B8 237 aaKnown RBP19■□□□□ 0.63
TRAPPC11-204ENST00000505676 RSPH10B2B2RC85 870 aa18.99■□□□□ 0.63
TRAPPC11-204ENST00000505676 FANCGO15287 622 aa18.99■□□□□ 0.63
TRAPPC11-204ENST00000505676 TADA3O75528 432 aa18.99■□□□□ 0.63
TRAPPC11-204ENST00000505676 PRPF6O94906 941 aaKnown RBP18.99■□□□□ 0.63
TRAPPC11-204ENST00000505676 RSPH10BP0C881 870 aa18.99■□□□□ 0.63
TRAPPC11-204ENST00000505676 ANXA13P27216 316 aa18.99■□□□□ 0.63
TRAPPC11-204ENST00000505676 KCNMA1Q12791 1236 aa18.99■□□□□ 0.63
TRAPPC11-204ENST00000505676 SLC30A10Q6XR72 485 aa18.99■□□□□ 0.63
TRAPPC11-204ENST00000505676 SLC9A9Q8IVB4 645 aa18.99■□□□□ 0.63
TRAPPC11-204ENST00000505676 NLGN2Q8NFZ4 835 aa18.99■□□□□ 0.63
TRAPPC11-204ENST00000505676 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.99■□□□□ 0.631e-7■■■■□ 19.5
TRAPPC11-204ENST00000505676 IL31RAQ8NI17 732 aa18.99■□□□□ 0.63
TRAPPC11-204ENST00000505676 TSC1Q92574 1164 aa18.99■□□□□ 0.63
TRAPPC11-204ENST00000505676 ZKSCAN4Q969J2 545 aaPredicted RBP18.99■□□□□ 0.63
TRAPPC11-204ENST00000505676 JAKMIP2Q96AA8 810 aa18.99■□□□□ 0.63
TRAPPC11-204ENST00000505676 TMEM206Q9H813 350 aa18.99■□□□□ 0.63
TRAPPC11-204ENST00000505676 ACAD9Q9H845 621 aa18.99■□□□□ 0.63
TRAPPC11-204ENST00000505676 SCAF8Q9UPN6 1271 aaKnown RBP18.99■□□□□ 0.63
TRAPPC11-204ENST00000505676 AFG3L2Q9Y4W6 797 aa18.99■□□□□ 0.63
TRAPPC11-204ENST00000505676 HOXD13P35453 343 aa18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 PSMC2P35998 433 aaKnown RBP18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 PSMC5P62195 406 aa18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 KCNH2Q12809 1159 aa18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 KIF5AQ12840 1032 aa18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 WHAMMP3Q1A5X7 153 aa18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 SLC9C1Q4G0N8 1177 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms