RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 HVCN1Q96D96 273 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 LXNQ9BS40 222 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 DEF6Q9H4E7 631 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 TMEM206Q9H813 350 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 KCNH7Q9NS40 1196 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 TADA3O75528 432 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 AFPP02771 609 aaKnown RBP12.47□□□□□ -0.41
NFKB1-205ENST00000505458 PTPRAP18433 802 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 C10orf76Q5T2E6 689 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 CYP2W1Q8TAV3 490 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 JAKMIP2Q96AA8 810 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 TRERF1Q96PN7 1200 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 WRNIP1Q96S55 665 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 SENP7Q9BQF6 1050 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 RUSC1Q9BVN2 902 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 ANKEF1Q9NU02 776 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 HOXC10Q9NYD6 342 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 ADAMTS5Q9UNA0 930 aa12.47□□□□□ -0.41
NFKB1-205ENST00000505458 SMCHD1A6NHR9 2005 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 WDR64B1ANS9 1081 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 NR3C1P04150 777 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 DSG3P32926 999 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 QARSP47897 775 aaKnown RBP12.46□□□□□ -0.41
NFKB1-205ENST00000505458 PSMC6P62333 389 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 RBM10P98175 930 aaKnown RBP12.46□□□□□ -0.41
NFKB1-205ENST00000505458 COG2Q14746 738 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 SLC9A9Q8IVB4 645 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 NELFCDQ8IXH7 590 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 MYCT1Q8N699 235 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 GPR161Q8N6U8 529 aaKnown RBP12.46□□□□□ -0.41
NFKB1-205ENST00000505458 ACRBPQ8NEB7 543 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 RABGGTAQ92696 567 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 WDR24Q96S15 920 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 LOC285556D6RIA3 1793 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 MYH11P35749 1972 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 SERPING1P05155 500 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 RFX1P22670 979 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 CTTNQ14247 550 aaKnown RBP12.46□□□□□ -0.41
NFKB1-205ENST00000505458 PPP2R5AQ15172 486 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 SH3D19Q5HYK7 790 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 IQCEQ6IPM2 695 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 ZNF746Q6NUN9 644 aaPredicted RBP12.46□□□□□ -0.41
NFKB1-205ENST00000505458 SAMD7Q7Z3H4 446 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 FAM178BQ8IXR5 827 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 C4orf19Q8IY42 314 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 TBC1D5Q92609 795 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 DRC1Q96MC2 740 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 CCDC94Q9BW85 323 aaPredicted RBP12.46□□□□□ -0.41
NFKB1-205ENST00000505458 ST6GALNAC4Q9H4F1 302 aa12.46□□□□□ -0.41
NFKB1-205ENST00000505458 RAVER2Q9HCJ3 691 aaKnown RBP12.46□□□□□ -0.41
NFKB1-205ENST00000505458 NFIBO00712 420 aa12.46□□□□□ -0.42
NFKB1-205ENST00000505458 ARP10275 920 aa12.46□□□□□ -0.42
NFKB1-205ENST00000505458 PSMC2P35998 433 aaKnown RBP12.46□□□□□ -0.42
NFKB1-205ENST00000505458 ARHGAP25P42331 645 aa12.46□□□□□ -0.42
NFKB1-205ENST00000505458 RASSF7Q02833 373 aa12.46□□□□□ -0.42
NFKB1-205ENST00000505458 CKAP4Q07065 602 aaKnown RBP12.46□□□□□ -0.42
NFKB1-205ENST00000505458 SPP2Q13103 211 aa12.46□□□□□ -0.42
NFKB1-205ENST00000505458 CCDC122Q5T0U0 273 aa12.46□□□□□ -0.42
NFKB1-205ENST00000505458 NBPF12Q5TAG4 269 aaPredicted RBP12.46□□□□□ -0.42
NFKB1-205ENST00000505458 SFMBT2Q5VUG0 894 aa12.46□□□□□ -0.42
NFKB1-205ENST00000505458 TEX13BQ9BXU2 312 aa12.46□□□□□ -0.42
NFKB1-205ENST00000505458 PXMP2Q9NR77 195 aa12.46□□□□□ -0.42
NFKB1-205ENST00000505458 RNF146Q9NTX7 359 aa12.46□□□□□ -0.42
NFKB1-205ENST00000505458 RGL1Q9NZL6 768 aa12.46□□□□□ -0.42
NFKB1-205ENST00000505458 TBC1D7Q9P0N9 293 aa12.46□□□□□ -0.42
NFKB1-205ENST00000505458 NPHP3-ACAD11A0A0J9YXS1 232 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 CHMP2AO43633 222 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 PGM5Q15124 567 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 ARHGEF16Q5VV41 709 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 SMAP1Q8IYB5 467 aaPredicted RBP12.45□□□□□ -0.42
NFKB1-205ENST00000505458 CCDC155Q8N6L0 562 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 TRIM58Q8NG06 486 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 CHP1Q99653 195 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 PDCD2LQ9BRP1 358 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 FAM207AQ9NSI2 230 aaPredicted RBP12.45□□□□□ -0.42
NFKB1-205ENST00000505458 RNF225M0QZC1 329 aaPredicted RBP12.45□□□□□ -0.42
NFKB1-205ENST00000505458 GFPT2O94808 682 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 ITGB5P18084 799 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 RPS6P62753 249 aaKnown RBP12.45□□□□□ -0.42
NFKB1-205ENST00000505458 ANGEL2Q5VTE6 544 aaKnown RBP12.45□□□□□ -0.42
NFKB1-205ENST00000505458 SRGAP1Q7Z6B7 1085 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 C12orf56Q8IXR9 622 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 CPXCR1Q8N123 301 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 NSUN6Q8TEA1 469 aaKnown RBP12.45□□□□□ -0.42
NFKB1-205ENST00000505458 ALS2CR12Q96Q35 445 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 RMDN3Q96TC7 470 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 AGPAT5Q9NUQ2 364 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 FBXO40Q9UH90 709 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 NFASCO94856 1347 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 ZNF541Q9H0D2 1346 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 RASSF10A6NK89 507 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 MAPK13O15264 365 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 ATP8B1O43520 1251 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 N4BP1O75113 896 aaKnown RBP12.45□□□□□ -0.42
NFKB1-205ENST00000505458 PSMC5P62195 406 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 R3HDM1Q15032 1099 aaKnown RBP12.45□□□□□ -0.42
NFKB1-205ENST00000505458 GNPTABQ3T906 1256 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 GBP6Q6ZN66 633 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 CHST13Q8NET6 341 aa12.45□□□□□ -0.42
NFKB1-205ENST00000505458 BAP1Q92560 729 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms