RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 MCM4P33991 863 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 PURAQ00577 322 aaKnown RBP11.48□□□□□ -0.57
RFC1-210ENST00000505077 CYP4A11Q02928 519 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 FAM160A1Q05DH4 1040 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 TMEM119Q4V9L6 283 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 XKR3Q5GH77 459 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 GNASQ5JWF2 1037 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 SWSAP1Q6NVH7 229 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 PDXDC2PQ6P474 469 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 FSIP1Q8NA03 581 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 IQUBQ8NA54 791 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 BANK1Q8NDB2 785 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 GLG1Q92896 1179 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 EPSTI1Q96J88 318 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 DEFB118Q96PH6 123 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 C16orf70Q9BSU1 422 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 MTG1Q9BT17 334 aaPredicted RBP11.48□□□□□ -0.57
RFC1-210ENST00000505077 MMTAG2Q9BU76 263 aaKnown RBP11.48□□□□□ -0.57
RFC1-210ENST00000505077 SEZ6LQ9BYH1 1024 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 CRISPLD2Q9H0B8 497 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 BCAS3Q9H6U6 928 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 GABBR1Q9UBS5 961 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 KCNH3Q9ULD8 1083 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 HPSEQ9Y251 543 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 COL1A2P08123 1366 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 ALPK3Q96L96 1907 aa11.48□□□□□ -0.57
RFC1-210ENST00000505077 POTEB3A0JP26 581 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 POTEFA5A3E0 1075 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 KBTBD13C9JR72 458 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 H3BRB1 525 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 SORBS3O60504 671 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 PRPF40AO75400 957 aaKnown RBP11.47□□□□□ -0.57
RFC1-210ENST00000505077 MED24O75448 989 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 OATP04181 439 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 ZNF286BP0CG31 522 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 PFKFB1P16118 471 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 STAT6P42226 847 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 PRKCEQ02156 737 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 LRRC41Q15345 812 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 MTFR1Q15390 333 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 SPECC1Q5M775 1068 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 RRAGBQ5VZM2 374 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 CCSAPQ6IQ19 270 aaPredicted RBP11.47□□□□□ -0.57
RFC1-210ENST00000505077 POTEBQ6S5H4 581 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 POTEGQ6S5H5 508 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 OTUD6AQ7L8S5 288 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 TPH2Q8IWU9 490 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 EXOC8Q8IYI6 725 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 ATP8B4Q8TF62 1192 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 U2AF1L4Q8WU68 220 aaKnown RBP11.47□□□□□ -0.57
RFC1-210ENST00000505077 FAM212AQ96EL1 285 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 DYDC2Q96IM9 177 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 PCYT2Q99447 389 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 TMEM106CQ9BVX2 250 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 TUT1Q9H6E5 874 aaKnown RBP11.47□□□□□ -0.57
RFC1-210ENST00000505077 ANKEF1Q9NU02 776 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 LMBRD1Q9NUN5 540 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 DDX19AQ9NUU7 478 aaKnown RBP11.47□□□□□ -0.57
RFC1-210ENST00000505077 RGL1Q9NZL6 768 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 KCND2Q9NZV8 630 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 DBR1Q9UK59 544 aaKnown RBP11.47□□□□□ -0.57
RFC1-210ENST00000505077 PHF24Q9UPV7 400 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 DNM3Q9UQ16 869 aa11.47□□□□□ -0.57
RFC1-210ENST00000505077 MYADML2A6NDP7 307 aa11.46□□□□□ -0.57
RFC1-210ENST00000505077 HAS3O00219 553 aa11.46□□□□□ -0.57
RFC1-210ENST00000505077 SGPL1O95470 568 aa11.46□□□□□ -0.57
RFC1-210ENST00000505077 MYL1P05976 194 aa11.46□□□□□ -0.57
RFC1-210ENST00000505077 MYL3P08590 195 aa11.46□□□□□ -0.57
RFC1-210ENST00000505077 PLCG1P19174 1290 aa11.46□□□□□ -0.57
RFC1-210ENST00000505077 CDC25AP30304 524 aa11.46□□□□□ -0.57
RFC1-210ENST00000505077 YWHABP31946 246 aaKnown RBP11.46□□□□□ -0.57
RFC1-210ENST00000505077 SYKP43405 635 aa11.46□□□□□ -0.57
RFC1-210ENST00000505077 GJA8P48165 433 aa11.46□□□□□ -0.57
RFC1-210ENST00000505077 BEX3Q00994 111 aa11.46□□□□□ -0.57
RFC1-210ENST00000505077 GRB10Q13322 594 aa11.46□□□□□ -0.57
RFC1-210ENST00000505077 KARSQ15046 597 aaKnown RBP11.46□□□□□ -0.57
RFC1-210ENST00000505077 E2F4Q16254 413 aa11.46□□□□□ -0.57
RFC1-210ENST00000505077 UGCGQ16739 394 aa11.46□□□□□ -0.57
RFC1-210ENST00000505077 UTP14CQ5TAP6 766 aaKnown RBP11.46□□□□□ -0.57
RFC1-210ENST00000505077 KANK3Q6NY19 840 aa11.46□□□□□ -0.57
RFC1-210ENST00000505077 USP49Q70CQ1 688 aa11.46□□□□□ -0.57
RFC1-210ENST00000505077 LARP4BQ92615 738 aaKnown RBP11.46□□□□□ -0.57
RFC1-210ENST00000505077 CCDC43Q96MW1 224 aaKnown RBP11.46□□□□□ -0.57
RFC1-210ENST00000505077 TIGD1Q96MW7 591 aa11.46□□□□□ -0.57
RFC1-210ENST00000505077 NIFKQ9BYG3 293 aaKnown RBP11.46□□□□□ -0.57
RFC1-210ENST00000505077 LRRC27Q9C0I9 530 aa11.46□□□□□ -0.57
RFC1-210ENST00000505077 NRBP2Q9NSY0 501 aa11.46□□□□□ -0.57
RFC1-210ENST00000505077 KIAA1024Q9UPX6 916 aa11.46□□□□□ -0.57
RFC1-210ENST00000505077 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.45□□□□□ -0.58
RFC1-210ENST00000505077 A0A1B0GVL5 298 aa11.45□□□□□ -0.58
RFC1-210ENST00000505077 POLR2DO15514 142 aaKnown RBP11.45□□□□□ -0.58
RFC1-210ENST00000505077 ZNF862O60290 1169 aa11.45□□□□□ -0.58
RFC1-210ENST00000505077 HBP1O60381 514 aa11.45□□□□□ -0.58
RFC1-210ENST00000505077 KINO60870 393 aaKnown RBP11.45□□□□□ -0.58
RFC1-210ENST00000505077 EYA4O95677 639 aa11.45□□□□□ -0.58
RFC1-210ENST00000505077 ASGR1P07306 291 aa11.45□□□□□ -0.58
RFC1-210ENST00000505077 PTGS1P23219 599 aa11.45□□□□□ -0.58
RFC1-210ENST00000505077 NDUFA8P51970 172 aa11.45□□□□□ -0.58
RFC1-210ENST00000505077 ACLYP53396 1101 aa11.45□□□□□ -0.58
RFC1-210ENST00000505077 PTPN11Q06124 597 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms