RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 DNAJC25-GNG10A0A024R161 153 aa5.74□□□□□ -1.49
CDH9-203ENST00000505045 TSPY2A6NKD2 308 aa5.74□□□□□ -1.49
CDH9-203ENST00000505045 STRNO43815 780 aa5.74□□□□□ -1.49
CDH9-203ENST00000505045 ORC4O43929 436 aa5.74□□□□□ -1.49
CDH9-203ENST00000505045 RANBP6O60518 1105 aaKnown RBP5.74□□□□□ -1.49
CDH9-203ENST00000505045 FGRP09769 529 aa5.74□□□□□ -1.49
CDH9-203ENST00000505045 FCER1AP12319 257 aa5.74□□□□□ -1.49
CDH9-203ENST00000505045 SDSP20132 328 aa5.74□□□□□ -1.49
CDH9-203ENST00000505045 MCCP23508 829 aa5.74□□□□□ -1.49
CDH9-203ENST00000505045 PDE4BQ07343 736 aa5.74□□□□□ -1.49
CDH9-203ENST00000505045 LRRFIP1Q32MZ4 808 aaKnown RBP5.74□□□□□ -1.49
CDH9-203ENST00000505045 MCMDC2Q4G0Z9 681 aa5.74□□□□□ -1.49
CDH9-203ENST00000505045 RRP12Q5JTH9 1297 aaKnown RBP5.74□□□□□ -1.49
CDH9-203ENST00000505045 TTBK2Q6IQ55 1244 aa5.74□□□□□ -1.49
CDH9-203ENST00000505045 RCSD1Q6JBY9 416 aa5.74□□□□□ -1.49
CDH9-203ENST00000505045 CWC27Q6UX04 472 aaKnown RBP5.74□□□□□ -1.49
CDH9-203ENST00000505045 ABRAQ8N0Z2 381 aa5.74□□□□□ -1.49
CDH9-203ENST00000505045 RWDD1Q9H446 243 aaPredicted RBP5.74□□□□□ -1.49
CDH9-203ENST00000505045 TPSG1Q9NRR2 321 aa5.74□□□□□ -1.49
CDH9-203ENST00000505045 ZMYM6O95789 1325 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 FRMPD2Q68DX3 1309 aaPredicted RBP5.73□□□□□ -1.49
CDH9-203ENST00000505045 BAZ2BQ9UIF8 2168 aaKnown RBP5.73□□□□□ -1.49
CDH9-203ENST00000505045 MYADML2A6NDP7 307 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 C9orf172C9J069 976 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 TMEM232C9JQI7 657 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 ATP2A1O14983 1001 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 ZBTB39O15060 712 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 SEPT4O43236 478 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 SLC25A27O95847 323 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 PGK1P00558 417 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 ZNF865P0CJ78 1059 aaPredicted RBP5.73□□□□□ -1.49
CDH9-203ENST00000505045 BMP3P12645 472 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 SLC16A2P36021 539 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 MAGEA10P43363 369 aaPredicted RBP5.73□□□□□ -1.49
CDH9-203ENST00000505045 STAT2P52630 851 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 CNTN2Q02246 1040 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 KCTD2Q14681 263 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 MBTPS1Q14703 1052 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 NAA30Q147X3 362 aaPredicted RBP5.73□□□□□ -1.49
CDH9-203ENST00000505045 ALX1Q15699 326 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 MUM1L1Q5H9M0 696 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 DMRTC2Q8IXT2 367 aaPredicted RBP5.73□□□□□ -1.49
CDH9-203ENST00000505045 DTWD1Q8N5C7 304 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 PRPF38AQ8NAV1 312 aaKnown RBP5.73□□□□□ -1.49
CDH9-203ENST00000505045 GDF15Q99988 308 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 ZKSCAN3Q9BRR0 538 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 TINF2Q9BSI4 451 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 CPVLQ9H3G5 476 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 A1CFQ9NQ94 594 aaKnown RBP5.73□□□□□ -1.49
CDH9-203ENST00000505045 TOMM22Q9NS69 142 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 ISY1Q9ULR0 285 aaKnown RBP5.73□□□□□ -1.49
CDH9-203ENST00000505045 TAF6LQ9Y6J9 622 aa5.73□□□□□ -1.49
CDH9-203ENST00000505045 TRANK1O15050 2925 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 RBAK-RBAKDNI3L0D1 243 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 DNM1LO00429 736 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 SNAI1O95863 264 aaPredicted RBP5.72□□□□□ -1.49
CDH9-203ENST00000505045 SLC1A4P43007 532 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 RAC1P63000 192 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 AAMPQ13685 434 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 LRRC41Q15345 812 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 TMEM63BQ5T3F8 832 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 LCE4AQ5TA78 99 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 CCDC174Q6PII3 467 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 FBXO11Q86XK2 927 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 STAG1Q8WVM7 1258 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 FERMT2Q96AC1 680 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 TMEM47Q9BQJ4 181 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 SENP6Q9GZR1 1112 aaPredicted RBP5.72□□□□□ -1.49
CDH9-203ENST00000505045 KATNBL1Q9H079 304 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 ZNF287Q9HBT7 754 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 RNF146Q9NTX7 359 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 STIM2Q9P246 746 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 FEM1BQ9UK73 627 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 SYNPO2Q9UMS6 1093 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 SYNRGQ9UMZ2 1314 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 CUL9Q8IWT3 2517 aa5.72□□□□□ -1.49
CDH9-203ENST00000505045 B4E1Z4 1266 aa5.71□□□□□ -1.49
CDH9-203ENST00000505045 NFIBO00712 420 aa5.71□□□□□ -1.49
CDH9-203ENST00000505045 MSCO60682 206 aa5.71□□□□□ -1.49
CDH9-203ENST00000505045 ADAMTS4O75173 837 aa5.71□□□□□ -1.49
CDH9-203ENST00000505045 SLC3A2P08195 630 aaKnown RBP5.71□□□□□ -1.49
CDH9-203ENST00000505045 PDHBP11177 359 aa5.71□□□□□ -1.49
CDH9-203ENST00000505045 IKQ13123 557 aaPredicted RBP5.71□□□□□ -1.49
CDH9-203ENST00000505045 CCDC96Q2M329 555 aa5.71□□□□□ -1.49
CDH9-203ENST00000505045 TRIM60Q495X7 471 aa5.71□□□□□ -1.49
CDH9-203ENST00000505045 AKNAD1Q5T1N1 836 aa5.71□□□□□ -1.49
CDH9-203ENST00000505045 TTC22Q5TAA0 569 aa5.71□□□□□ -1.49
CDH9-203ENST00000505045 ELMSAN1Q6PJG2 1045 aa5.71□□□□□ -1.49
CDH9-203ENST00000505045 SHISA2Q6UWI4 295 aa5.71□□□□□ -1.49
CDH9-203ENST00000505045 HFE2Q6ZVN8 426 aa5.71□□□□□ -1.49
CDH9-203ENST00000505045 SMG9Q9H0W8 520 aaKnown RBP5.71□□□□□ -1.49
CDH9-203ENST00000505045 DIAPH3Q9NSV4 1193 aa5.71□□□□□ -1.49
CDH9-203ENST00000505045 SEPT3Q9UH03 358 aa5.71□□□□□ -1.49
CDH9-203ENST00000505045 ZHX1Q9UKY1 873 aaPredicted RBP5.71□□□□□ -1.49
CDH9-203ENST00000505045 NR2E3Q9Y5X4 410 aa5.71□□□□□ -1.49
CDH9-203ENST00000505045 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.71□□□□□ -1.5
CDH9-203ENST00000505045 J3QW42 95 aa5.71□□□□□ -1.5
CDH9-203ENST00000505045 CTAGE5O15320 804 aa5.71□□□□□ -1.5
CDH9-203ENST00000505045 CENPBP07199 599 aaPredicted RBP5.71□□□□□ -1.5
CDH9-203ENST00000505045 PSAPP07602 524 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms