RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 LRRC9Q6ZRR7 1453 aa7.2□□□□□ -1.26
DEPDC1B-203ENST00000505017 ARVCFO00192 962 aa7.2□□□□□ -1.26
DEPDC1B-203ENST00000505017 ZNF888P0CJ79 500 aaPredicted RBP7.2□□□□□ -1.26
DEPDC1B-203ENST00000505017 SEC23AQ15436 765 aa7.2□□□□□ -1.26
DEPDC1B-203ENST00000505017 SLFN13Q68D06 897 aa7.2□□□□□ -1.26
DEPDC1B-203ENST00000505017 ARHGAP36Q6ZRI8 547 aa7.2□□□□□ -1.26
DEPDC1B-203ENST00000505017 OSTM1Q86WC4 334 aa7.2□□□□□ -1.26
DEPDC1B-203ENST00000505017 CIR1Q86X95 450 aaPredicted RBP7.2□□□□□ -1.26
DEPDC1B-203ENST00000505017 SCUBE1Q8IWY4 988 aa7.2□□□□□ -1.26
DEPDC1B-203ENST00000505017 GNRHR2Q96P88 292 aa7.2□□□□□ -1.26
DEPDC1B-203ENST00000505017 CCDC113Q9H0I3 377 aa7.2□□□□□ -1.26
DEPDC1B-203ENST00000505017 TRBV23-1A0A0A0MS06 115 aa7.19□□□□□ -1.26
DEPDC1B-203ENST00000505017 STK10O94804 968 aaKnown RBP7.19□□□□□ -1.26
DEPDC1B-203ENST00000505017 PYGMP11217 842 aa7.19□□□□□ -1.26
DEPDC1B-203ENST00000505017 PDE6AP16499 860 aa7.19□□□□□ -1.26
DEPDC1B-203ENST00000505017 PTPN1P18031 435 aaKnown RBP7.19□□□□□ -1.26
DEPDC1B-203ENST00000505017 PAK1Q13153 545 aa7.19□□□□□ -1.26
DEPDC1B-203ENST00000505017 SERINC3Q13530 473 aa7.19□□□□□ -1.26
DEPDC1B-203ENST00000505017 ZNF585AQ6P3V2 769 aa7.19□□□□□ -1.26
DEPDC1B-203ENST00000505017 PTRH1Q86Y79 214 aaKnown RBP7.19□□□□□ -1.26
DEPDC1B-203ENST00000505017 CKAP2LQ8IYA6 745 aa7.19□□□□□ -1.26
DEPDC1B-203ENST00000505017 Q8TCH9 128 aa7.19□□□□□ -1.26
DEPDC1B-203ENST00000505017 SH3RF3Q8TEJ3 882 aaPredicted RBP7.19□□□□□ -1.26
DEPDC1B-203ENST00000505017 PTPRN2Q92932 1015 aa7.19□□□□□ -1.26
DEPDC1B-203ENST00000505017 ALG1Q9BT22 464 aa7.19□□□□□ -1.26
DEPDC1B-203ENST00000505017 SLC4A7Q9Y6M7 1214 aa7.19□□□□□ -1.26
DEPDC1B-203ENST00000505017 CLASP1Q7Z460 1538 aa7.18□□□□□ -1.26
DEPDC1B-203ENST00000505017 CCDC85CA6NKD9 419 aa7.18□□□□□ -1.26
DEPDC1B-203ENST00000505017 ZNF561-AS1K7EIQ3 104 aa7.18□□□□□ -1.26
DEPDC1B-203ENST00000505017 FOXS1O43638 330 aa7.18□□□□□ -1.26
DEPDC1B-203ENST00000505017 FBXO21O94952 628 aa7.18□□□□□ -1.26
DEPDC1B-203ENST00000505017 JAM2P57087 298 aa7.18□□□□□ -1.26
DEPDC1B-203ENST00000505017 ZC3H6P61129 1189 aaKnown RBP7.18□□□□□ -1.26
DEPDC1B-203ENST00000505017 SSRP1Q08945 709 aaKnown RBP7.18□□□□□ -1.26
DEPDC1B-203ENST00000505017 MTERF2Q49AM1 385 aa7.18□□□□□ -1.26
DEPDC1B-203ENST00000505017 FSTL4Q6MZW2 842 aa7.18□□□□□ -1.26
DEPDC1B-203ENST00000505017 MAMDC2Q7Z304 686 aaPredicted RBP7.18□□□□□ -1.26
DEPDC1B-203ENST00000505017 SMURF1Q9HCE7 757 aa7.18□□□□□ -1.26
DEPDC1B-203ENST00000505017 PCDHA9Q9Y5H5 950 aa7.18□□□□□ -1.26
DEPDC1B-203ENST00000505017 EHBP1L1Q8N3D4 1523 aa7.17□□□□□ -1.26
DEPDC1B-203ENST00000505017 RAPGEF6Q8TEU7 1601 aa7.17□□□□□ -1.26
DEPDC1B-203ENST00000505017 FAM221BA6H8Z2 402 aa7.17□□□□□ -1.26
DEPDC1B-203ENST00000505017 KCNK3O14649 394 aa7.17□□□□□ -1.26
DEPDC1B-203ENST00000505017 GPR19Q15760 415 aa7.17□□□□□ -1.26
DEPDC1B-203ENST00000505017 TM4SF20Q53R12 229 aa7.17□□□□□ -1.26
DEPDC1B-203ENST00000505017 BTBD8Q5XKL5 378 aa7.17□□□□□ -1.26
DEPDC1B-203ENST00000505017 RALYLQ86SE5 291 aaKnown RBP7.17□□□□□ -1.26
DEPDC1B-203ENST00000505017 KISS1RQ969F8 398 aaPredicted RBP7.17□□□□□ -1.26
DEPDC1B-203ENST00000505017 SCAND2PQ9GZW5 306 aaPredicted RBP7.17□□□□□ -1.26
DEPDC1B-203ENST00000505017 JADE2Q9NQC1 790 aa7.17□□□□□ -1.26
DEPDC1B-203ENST00000505017 RRBP1Q9P2E9 1410 aaKnown RBP7.17□□□□□ -1.26
DEPDC1B-203ENST00000505017 H0Y858 1186 aa7.16□□□□□ -1.26
DEPDC1B-203ENST00000505017 ZNF623O75123 536 aa7.16□□□□□ -1.26
DEPDC1B-203ENST00000505017 C4BPAP04003 597 aaKnown RBP7.16□□□□□ -1.26
DEPDC1B-203ENST00000505017 SUMO1P63165 101 aaKnown RBP7.16□□□□□ -1.26
DEPDC1B-203ENST00000505017 RASA3Q14644 834 aa7.16□□□□□ -1.26
DEPDC1B-203ENST00000505017 TCTN3Q6NUS6 607 aa7.16□□□□□ -1.26
DEPDC1B-203ENST00000505017 MTDHQ86UE4 582 aaKnown RBP7.16□□□□□ -1.26
DEPDC1B-203ENST00000505017 PALM2Q8IXS6 379 aa7.16□□□□□ -1.26
DEPDC1B-203ENST00000505017 SEC61A2Q9H9S3 476 aa7.16□□□□□ -1.26
DEPDC1B-203ENST00000505017 BTBD7Q9P203 1132 aa7.16□□□□□ -1.26
DEPDC1B-203ENST00000505017 NUB1Q9Y5A7 615 aa7.16□□□□□ -1.26
DEPDC1B-203ENST00000505017 EPRSP07814 1512 aaKnown RBP7.16□□□□□ -1.26
DEPDC1B-203ENST00000505017 LRRIQ1Q96JM4 1722 aa7.15□□□□□ -1.26
DEPDC1B-203ENST00000505017 AQP7O14520 342 aa7.15□□□□□ -1.26
DEPDC1B-203ENST00000505017 CRTAMO95727 393 aa7.15□□□□□ -1.26
DEPDC1B-203ENST00000505017 SRGAP2CP0DJJ0 459 aa7.15□□□□□ -1.26
DEPDC1B-203ENST00000505017 MC4RP32245 332 aa7.15□□□□□ -1.26
DEPDC1B-203ENST00000505017 GUCY1A3Q02108 690 aa7.15□□□□□ -1.26
DEPDC1B-203ENST00000505017 TOP3AQ13472 1001 aaPredicted RBP7.15□□□□□ -1.26
DEPDC1B-203ENST00000505017 C16orf59Q7L2K0 433 aa7.15□□□□□ -1.26
DEPDC1B-203ENST00000505017 SLC16A11Q8NCK7 471 aa7.15□□□□□ -1.26
DEPDC1B-203ENST00000505017 FBXW5Q969U6 566 aa7.15□□□□□ -1.26
DEPDC1B-203ENST00000505017 CDC6Q99741 560 aa7.15□□□□□ -1.26
DEPDC1B-203ENST00000505017 MRPS23Q9Y3D9 190 aaKnown RBP7.15□□□□□ -1.26
DEPDC1B-203ENST00000505017 MTUS2Q5JR59 1369 aa7.15□□□□□ -1.26
DEPDC1B-203ENST00000505017 PRG4Q92954 1404 aaPredicted RBP7.15□□□□□ -1.27
DEPDC1B-203ENST00000505017 ABCA8O94911 1581 aa7.15□□□□□ -1.27
DEPDC1B-203ENST00000505017 ESYT3A0FGR9 886 aa7.14□□□□□ -1.27
DEPDC1B-203ENST00000505017 MATN2O00339 956 aa7.14□□□□□ -1.27
DEPDC1B-203ENST00000505017 MPIG6BO95866 241 aa7.14□□□□□ -1.27
DEPDC1B-203ENST00000505017 KRT15P19012 456 aa7.14□□□□□ -1.27
DEPDC1B-203ENST00000505017 NOLC1Q14978 699 aaKnown RBP eCLIP7.14□□□□□ -1.27
DEPDC1B-203ENST00000505017 SPDYAQ5MJ70 313 aa7.14□□□□□ -1.27
DEPDC1B-203ENST00000505017 CRIP3Q6Q6R5 217 aa7.14□□□□□ -1.27
DEPDC1B-203ENST00000505017 SUPT6HQ7KZ85 1726 aaKnown RBP7.14□□□□□ -1.27
DEPDC1B-203ENST00000505017 DPH6Q7L8W6 267 aa7.14□□□□□ -1.27
DEPDC1B-203ENST00000505017 REXO1L1PQ8IX06 675 aa7.14□□□□□ -1.27
DEPDC1B-203ENST00000505017 LRRC37BQ96QE4 947 aa7.14□□□□□ -1.27
DEPDC1B-203ENST00000505017 DHRS4Q9BTZ2 278 aa7.14□□□□□ -1.27
DEPDC1B-203ENST00000505017 ZNF747Q9BV97 191 aa7.14□□□□□ -1.27
DEPDC1B-203ENST00000505017 TANGO6Q9C0B7 1094 aa7.14□□□□□ -1.27
DEPDC1B-203ENST00000505017 SLC52A2Q9HAB3 445 aa7.14□□□□□ -1.27
DEPDC1B-203ENST00000505017 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.14□□□□□ -1.27
DEPDC1B-203ENST00000505017 CATSPERZQ9NTU4 200 aa7.14□□□□□ -1.27
DEPDC1B-203ENST00000505017 RIC8BQ9NVN3 520 aa7.14□□□□□ -1.27
DEPDC1B-203ENST00000505017 NUP153P49790 1475 aaKnown RBP7.13□□□□□ -1.27
DEPDC1B-203ENST00000505017 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.13□□□□□ -1.27
DEPDC1B-203ENST00000505017 E9PSI1 815 aa7.13□□□□□ -1.27
DEPDC1B-203ENST00000505017 C6P13671 934 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms