RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 MTMR3Q13615 1198 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 ZNF787Q6DD87 383 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 CHST3Q7LGC8 479 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 DGLUCYQ7Z3D6 616 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 ADGRD2Q7Z7M1 963 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 DGKHQ86XP1 1220 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 NPAS4Q8IUM7 802 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 ZDHHC14Q8IZN3 488 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 KLHL23Q8NBE8 558 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 KREMEN2Q8NCW0 462 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 OTUD7AQ8TE49 926 aaPredicted RBP7.01□□□□□ -1.29
GYPB-204ENST00000504951 CHMP4CQ96CF2 233 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 SPATA33Q96N06 139 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 SEC62Q99442 399 aaKnown RBP7.01□□□□□ -1.29
GYPB-204ENST00000504951 RTP3Q9BQQ7 232 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 CDHR5Q9HBB8 845 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 PXMP2Q9NR77 195 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 COL20A1Q9P218 1284 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 RCAN3Q9UKA8 241 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 ISY1Q9ULR0 285 aaKnown RBP7.01□□□□□ -1.29
GYPB-204ENST00000504951 PCDHGC5Q9Y5F6 944 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 MYO10Q9HD67 2058 aa7□□□□□ -1.29
GYPB-204ENST00000504951 ACACBO00763 2458 aa7□□□□□ -1.29
GYPB-204ENST00000504951 MED19A0JLT2 244 aaPredicted RBP7□□□□□ -1.29
GYPB-204ENST00000504951 MBLAC1A4D2B0 266 aaPredicted RBP7□□□□□ -1.29
GYPB-204ENST00000504951 C3orf80F5H4A9 247 aa7□□□□□ -1.29
GYPB-204ENST00000504951 FOXP2O15409 715 aa7□□□□□ -1.29
GYPB-204ENST00000504951 NMT2O60551 498 aa7□□□□□ -1.29
GYPB-204ENST00000504951 GGPS1O95749 300 aa7□□□□□ -1.29
GYPB-204ENST00000504951 PDGFBP01127 241 aaPredicted RBP7□□□□□ -1.29
GYPB-204ENST00000504951 LMNAP02545 664 aaKnown RBP7□□□□□ -1.29
GYPB-204ENST00000504951 LGALS2P05162 132 aa7□□□□□ -1.29
GYPB-204ENST00000504951 STAG3L1P0CL83 205 aa7□□□□□ -1.29
GYPB-204ENST00000504951 AOC1P19801 751 aa7□□□□□ -1.29
GYPB-204ENST00000504951 PLCB3Q01970 1234 aa7□□□□□ -1.29
GYPB-204ENST00000504951 SP2Q02086 613 aa7□□□□□ -1.29
GYPB-204ENST00000504951 NEDD9Q14511 834 aa7□□□□□ -1.29
GYPB-204ENST00000504951 LPIN1Q14693 890 aa7□□□□□ -1.29
GYPB-204ENST00000504951 CCDC178Q5BJE1 867 aa7□□□□□ -1.29
GYPB-204ENST00000504951 FBXO47Q5MNV8 452 aa7□□□□□ -1.29
GYPB-204ENST00000504951 SWT1Q5T5J6 900 aaKnown RBP7□□□□□ -1.29
GYPB-204ENST00000504951 ARHGEF16Q5VV41 709 aa7□□□□□ -1.29
GYPB-204ENST00000504951 ANKRD54Q6NXT1 300 aa7□□□□□ -1.29
GYPB-204ENST00000504951 SYCE2Q6PIF2 218 aa7□□□□□ -1.29
GYPB-204ENST00000504951 METTL7BQ6UX53 244 aa7□□□□□ -1.29
GYPB-204ENST00000504951 FRMD5Q7Z6J6 570 aa7□□□□□ -1.29
GYPB-204ENST00000504951 RSPH3Q86UC2 560 aa7□□□□□ -1.29
GYPB-204ENST00000504951 TTC13Q8NBP0 860 aa7□□□□□ -1.29
GYPB-204ENST00000504951 TBC1D5Q92609 795 aa7□□□□□ -1.29
GYPB-204ENST00000504951 RMDN1Q96DB5 314 aa7□□□□□ -1.29
GYPB-204ENST00000504951 SENP7Q9BQF6 1050 aa7□□□□□ -1.29
GYPB-204ENST00000504951 PDCD2LQ9BRP1 358 aa7□□□□□ -1.29
GYPB-204ENST00000504951 GPCPD1Q9NPB8 672 aa7□□□□□ -1.29
GYPB-204ENST00000504951 NGRNQ9NPE2 291 aaKnown RBP7□□□□□ -1.29
GYPB-204ENST00000504951 AAASQ9NRG9 546 aa7□□□□□ -1.29
GYPB-204ENST00000504951 BARX2Q9UMQ3 279 aaPredicted RBP7□□□□□ -1.29
GYPB-204ENST00000504951 MRPL42Q9Y6G3 142 aaKnown RBP7□□□□□ -1.29
GYPB-204ENST00000504951 VPS13AQ96RL7 3174 aa7□□□□□ -1.29
GYPB-204ENST00000504951 NCOR2Q9Y618 2525 aa7□□□□□ -1.29
GYPB-204ENST00000504951 ZMYM6O95789 1325 aa7□□□□□ -1.29
GYPB-204ENST00000504951 MYH7BA7E2Y1 1941 aa6.99□□□□□ -1.29
GYPB-204ENST00000504951 OTOGLQ3ZCN5 2332 aa6.99□□□□□ -1.29
GYPB-204ENST00000504951 RANBP6O60518 1105 aaKnown RBP6.99□□□□□ -1.29
GYPB-204ENST00000504951 KDM4AO75164 1064 aa6.99□□□□□ -1.29
GYPB-204ENST00000504951 BRD1O95696 1058 aa6.99□□□□□ -1.29
GYPB-204ENST00000504951 COPS2P61201 443 aa6.99□□□□□ -1.29
GYPB-204ENST00000504951 TRAF1Q13077 416 aa6.99□□□□□ -1.29
GYPB-204ENST00000504951 TSHZ1Q6ZSZ6 1077 aa6.99□□□□□ -1.29
GYPB-204ENST00000504951 RTN4RL1Q86UN2 441 aaPredicted RBP6.99□□□□□ -1.29
GYPB-204ENST00000504951 CCDC105Q8IYK2 499 aa6.99□□□□□ -1.29
GYPB-204ENST00000504951 GPR161Q8N6U8 529 aaKnown RBP6.99□□□□□ -1.29
GYPB-204ENST00000504951 VN1R2Q8NFZ6 395 aa6.99□□□□□ -1.29
GYPB-204ENST00000504951 MTMR8Q96EF0 704 aa6.99□□□□□ -1.29
GYPB-204ENST00000504951 GPATCH3Q96I76 525 aa6.99□□□□□ -1.29
GYPB-204ENST00000504951 ADAM7Q9H2U9 754 aa6.99□□□□□ -1.29
GYPB-204ENST00000504951 DCTPP1Q9H773 170 aa6.99□□□□□ -1.29
GYPB-204ENST00000504951 MLXIPQ9HAP2 919 aa6.99□□□□□ -1.29
GYPB-204ENST00000504951 SETD4Q9NVD3 440 aa6.99□□□□□ -1.29
GYPB-204ENST00000504951 ZNF215Q9UL58 517 aaPredicted RBP6.99□□□□□ -1.29
GYPB-204ENST00000504951 PCDHB12Q9Y5F1 795 aa6.99□□□□□ -1.29
GYPB-204ENST00000504951 ZFHX4Q86UP3 3567 aa6.99□□□□□ -1.29
GYPB-204ENST00000504951 TTC41PQ6P2S7 1318 aa6.99□□□□□ -1.29
GYPB-204ENST00000504951 KDM3AQ9Y4C1 1321 aa6.99□□□□□ -1.29
GYPB-204ENST00000504951 CEP250Q9BV73 2442 aa6.98□□□□□ -1.29
GYPB-204ENST00000504951 SPATA31C2B4DYI2 1134 aa6.98□□□□□ -1.29
GYPB-204ENST00000504951 OPLAHO14841 1288 aa6.98□□□□□ -1.29
GYPB-204ENST00000504951 KRT37O76014 449 aa6.98□□□□□ -1.29
GYPB-204ENST00000504951 NPR3P17342 541 aa6.98□□□□□ -1.29
GYPB-204ENST00000504951 UBA1P22314 1058 aaKnown RBP6.98□□□□□ -1.29
GYPB-204ENST00000504951 MTHFRP42898 656 aa6.98□□□□□ -1.29
GYPB-204ENST00000504951 PGM5Q15124 567 aa6.98□□□□□ -1.29
GYPB-204ENST00000504951 TPRNQ4KMQ1 711 aa6.98□□□□□ -1.29
GYPB-204ENST00000504951 ASPRV1Q53RT3 343 aa6.98□□□□□ -1.29
GYPB-204ENST00000504951 XRRA1Q6P2D8 792 aa6.98□□□□□ -1.29
GYPB-204ENST00000504951 PADI6Q6TGC4 694 aa6.98□□□□□ -1.29
GYPB-204ENST00000504951 DTWD2Q8NBA8 298 aa6.98□□□□□ -1.29
GYPB-204ENST00000504951 GIMAP8Q8ND71 665 aaPredicted RBP6.98□□□□□ -1.29
GYPB-204ENST00000504951 PI4K2BQ8TCG2 481 aa6.98□□□□□ -1.29
GYPB-204ENST00000504951 LMBR1Q8WVP7 490 aa6.98□□□□□ -1.29
GYPB-204ENST00000504951 INPP4AQ96PE3 977 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms