RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-208ENST00000504813 DTNBO60941 627 aa16.67■□□□□ 0.26
CNBP-208ENST00000504813 EFCAB14O75071 495 aa16.67■□□□□ 0.26
CNBP-208ENST00000504813 GJB2P29033 226 aa16.67■□□□□ 0.26
CNBP-208ENST00000504813 SLC26A2P50443 739 aa16.67■□□□□ 0.26
CNBP-208ENST00000504813 IGBP1P78318 339 aa16.67■□□□□ 0.26
CNBP-208ENST00000504813 PPP2R2DQ66LE6 453 aa16.67■□□□□ 0.26
CNBP-208ENST00000504813 GALNT17Q6IS24 598 aa16.67■□□□□ 0.26
CNBP-208ENST00000504813 TMCO2Q7Z6W1 182 aaPredicted RBP16.67■□□□□ 0.26
CNBP-208ENST00000504813 CCDC60Q8IWA6 550 aaPredicted RBP16.67■□□□□ 0.26
CNBP-208ENST00000504813 SLC17A8Q8NDX2 589 aa16.67■□□□□ 0.26
CNBP-208ENST00000504813 PHF20Q9BVI0 1012 aa16.67■□□□□ 0.26
CNBP-208ENST00000504813 PRDM12Q9H4Q4 367 aa16.67■□□□□ 0.26
CNBP-208ENST00000504813 KIF3AQ9Y496 699 aa16.67■□□□□ 0.26
CNBP-208ENST00000504813 CHRNA1P02708 482 aa16.66■□□□□ 0.26
CNBP-208ENST00000504813 CA3P07451 260 aa16.66■□□□□ 0.26
CNBP-208ENST00000504813 PDCP20941 246 aa16.66■□□□□ 0.26
CNBP-208ENST00000504813 MGAT3Q09327 533 aa16.66■□□□□ 0.26
CNBP-208ENST00000504813 ZNF746Q6NUN9 644 aaPredicted RBP16.66■□□□□ 0.26
CNBP-208ENST00000504813 MAFAQ8NHW3 353 aaPredicted RBP16.66■□□□□ 0.26
CNBP-208ENST00000504813 DNAJB3Q8WWF6 145 aa16.66■□□□□ 0.26
CNBP-208ENST00000504813 TNPO1Q92973 898 aaKnown RBP16.66■□□□□ 0.26
CNBP-208ENST00000504813 ZBTB10Q96DT7 871 aa16.66■□□□□ 0.26
CNBP-208ENST00000504813 GBP4Q96PP9 640 aa16.66■□□□□ 0.26
CNBP-208ENST00000504813 KCNJ14Q9UNX9 436 aa16.66■□□□□ 0.26
CNBP-208ENST00000504813 TRPC6Q9Y210 931 aa16.66■□□□□ 0.26
CNBP-208ENST00000504813 POTEB3A0JP26 581 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 MSH4O15457 936 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 ATP4AP20648 1035 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 ST3GAL1Q11201 340 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 FAM160B1Q5W0V3 765 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 SWSAP1Q6NVH7 229 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 MIS18BP1Q6P0N0 1132 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 POTEBQ6S5H4 581 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.65■□□□□ 0.262e-9■■■■■ 32.6
CNBP-208ENST00000504813 TRAPPC12Q8WVT3 735 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 ZNF302Q9NR11 478 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 GJB4Q9NTQ9 266 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 CYP3A7-CYP3A51PA0A087WV96 503 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 KIF28PB7ZC32 967 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 BACH1O14867 736 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 TLL1O43897 1013 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 ARHGEF15O94989 841 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 GJB5O95377 273 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 FDPSP14324 419 aaKnown RBP16.65■□□□□ 0.26
CNBP-208ENST00000504813 CYP3A7P24462 503 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 HMGN5P82970 282 aaKnown RBP16.65■□□□□ 0.26
CNBP-208ENST00000504813 KRT76Q01546 638 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 NFKBIBQ15653 356 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 Q4G0T1 1027 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 RSPH3Q86UC2 560 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 SMAP1Q8IYB5 467 aaPredicted RBP16.65■□□□□ 0.26
CNBP-208ENST00000504813 SEPT8Q92599 483 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 GAS2L1Q99501 681 aaPredicted RBP16.65■□□□□ 0.26
CNBP-208ENST00000504813 PCDHA2Q9Y5H9 948 aa16.65■□□□□ 0.26
CNBP-208ENST00000504813 MAFBQ9Y5Q3 323 aaPredicted RBP16.65■□□□□ 0.26
CNBP-208ENST00000504813 TRANK1O15050 2925 aa16.64■□□□□ 0.25
CNBP-208ENST00000504813 REV3LO60673 3130 aa16.64■□□□□ 0.25
CNBP-208ENST00000504813 HBP1O60381 514 aa16.64■□□□□ 0.25
CNBP-208ENST00000504813 TAP1Q03518 808 aa16.64■□□□□ 0.25
CNBP-208ENST00000504813 ADGRE1Q14246 886 aa16.64■□□□□ 0.25
CNBP-208ENST00000504813 PDXDC2PQ6P474 469 aa16.64■□□□□ 0.25
CNBP-208ENST00000504813 FAM184AQ8NB25 1140 aa16.64■□□□□ 0.25
CNBP-208ENST00000504813 ATP8B4Q8TF62 1192 aa16.64■□□□□ 0.25
CNBP-208ENST00000504813 SLC5A5Q92911 643 aa16.64■□□□□ 0.25
CNBP-208ENST00000504813 MBOAT7Q96N66 472 aa16.64■□□□□ 0.25
CNBP-208ENST00000504813 RIT2Q99578 217 aa16.64■□□□□ 0.25
CNBP-208ENST00000504813 ORC3Q9UBD5 711 aaPredicted RBP16.64■□□□□ 0.25
CNBP-208ENST00000504813 PCDHA10Q9Y5I2 948 aa16.64■□□□□ 0.25
CNBP-208ENST00000504813 COL4A4P53420 1690 aaPredicted RBP16.64■□□□□ 0.25
CNBP-208ENST00000504813 LCHNA4D1U4 455 aa16.63■□□□□ 0.25
CNBP-208ENST00000504813 ZBTB42B2RXF5 422 aa16.63■□□□□ 0.25
CNBP-208ENST00000504813 TDP2O95551 362 aa16.63■□□□□ 0.25
CNBP-208ENST00000504813 RPLP2P05387 115 aaKnown RBP16.63■□□□□ 0.25
CNBP-208ENST00000504813 COL1A2P08123 1366 aa16.63■□□□□ 0.25
CNBP-208ENST00000504813 XBP1P17861 261 aa16.63■□□□□ 0.25
CNBP-208ENST00000504813 NBR1Q14596 966 aa16.63■□□□□ 0.25
CNBP-208ENST00000504813 NONOQ15233 471 aaKnown RBP eCLIP16.63■□□□□ 0.253e-6■■■■□ 21.9
CNBP-208ENST00000504813 LARP1BQ659C4 914 aaKnown RBP16.63■□□□□ 0.25
CNBP-208ENST00000504813 MTHFD1LQ6UB35 978 aa16.63■□□□□ 0.25
CNBP-208ENST00000504813 MOXD1Q6UVY6 613 aa16.63■□□□□ 0.25
CNBP-208ENST00000504813 KRT25Q7Z3Z0 450 aa16.63■□□□□ 0.25
CNBP-208ENST00000504813 APBB2Q92870 758 aa16.63■□□□□ 0.25
CNBP-208ENST00000504813 IFIH1Q9BYX4 1025 aaKnown RBP16.63■□□□□ 0.25
CNBP-208ENST00000504813 CDY2AQ9Y6F7 541 aa16.63■□□□□ 0.25
CNBP-208ENST00000504813 NLRC5Q86WI3 1866 aa16.62■□□□□ 0.25
CNBP-208ENST00000504813 IGSF9BQ9UPX0 1349 aa16.62■□□□□ 0.25
CNBP-208ENST00000504813 SMIM35A0A1B0GVV1 85 aa16.62■□□□□ 0.25
CNBP-208ENST00000504813 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.62■□□□□ 0.25
CNBP-208ENST00000504813 STX6O43752 255 aa16.62■□□□□ 0.25
CNBP-208ENST00000504813 PSMD10O75832 226 aa16.62■□□□□ 0.25
CNBP-208ENST00000504813 BRD1O95696 1058 aa16.62■□□□□ 0.25
CNBP-208ENST00000504813 PSAPP07602 524 aa16.62■□□□□ 0.25
CNBP-208ENST00000504813 GHRP10912 638 aa16.62■□□□□ 0.25
CNBP-208ENST00000504813 SYT1P21579 422 aa16.62■□□□□ 0.25
CNBP-208ENST00000504813 MRPS6P82932 125 aaKnown RBP16.62■□□□□ 0.25
CNBP-208ENST00000504813 LPIN1Q14693 890 aa16.62■□□□□ 0.25
CNBP-208ENST00000504813 INF2Q27J81 1249 aa16.62■□□□□ 0.25
CNBP-208ENST00000504813 FBXO47Q5MNV8 452 aa16.62■□□□□ 0.25
CNBP-208ENST00000504813 NSUN7Q8NE18 718 aaKnown RBP16.62■□□□□ 0.25
CNBP-208ENST00000504813 OXER1Q8TDS5 423 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms