RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 CACTINQ8WUQ7 758 aaKnown RBP14.73□□□□□ -0.05
LMNA-220ENST00000504687 TMEM174Q8WUU8 243 aa14.73□□□□□ -0.05
LMNA-220ENST00000504687 SCFD1Q8WVM8 642 aa14.73□□□□□ -0.05
LMNA-220ENST00000504687 BRI3BPQ8WY22 251 aa14.73□□□□□ -0.05
LMNA-220ENST00000504687 ATP6V0A1Q93050 837 aa14.73□□□□□ -0.05
LMNA-220ENST00000504687 ZFP91Q96JP5 570 aaPredicted RBP14.73□□□□□ -0.05
LMNA-220ENST00000504687 CEP63Q96MT8 703 aa14.73□□□□□ -0.05
LMNA-220ENST00000504687 PAGR1Q9BTK6 254 aa14.73□□□□□ -0.05
LMNA-220ENST00000504687 SRRTQ9BXP5 876 aaKnown RBP14.73□□□□□ -0.05
LMNA-220ENST00000504687 KCTD10Q9H3F6 313 aa14.73□□□□□ -0.05
LMNA-220ENST00000504687 JPH1Q9HDC5 661 aaPredicted RBP14.73□□□□□ -0.05
LMNA-220ENST00000504687 MAGEC2Q9UBF1 373 aaPredicted RBP14.73□□□□□ -0.05
LMNA-220ENST00000504687 SLC9A2Q9UBY0 812 aa14.73□□□□□ -0.05
LMNA-220ENST00000504687 TRAF3IP3Q9Y228 551 aa14.73□□□□□ -0.05
LMNA-220ENST00000504687 PLXNA1Q9UIW2 1896 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 IGKV6D-21A0A0A0MT36 114 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 ARHGEF35A5YM69 484 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 BTBD19C9JJ37 291 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 PDHXO00330 501 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 PDXKO00764 312 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 STRNO43815 780 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 TBCAO75347 108 aaKnown RBP14.72□□□□□ -0.05
LMNA-220ENST00000504687 GNA14O95837 355 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 PSAPP07602 524 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 RARRES1P49788 294 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 FKBP3Q00688 224 aaKnown RBP14.72□□□□□ -0.05
LMNA-220ENST00000504687 CNTN2Q02246 1040 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 CST9Q5W186 159 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 ABHD15Q6UXT9 468 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 LRRC55Q6ZSA7 311 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 ZNF467Q7Z7K2 595 aaPredicted RBP14.72□□□□□ -0.05
LMNA-220ENST00000504687 BANK1Q8NDB2 785 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 SLC17A8Q8NDX2 589 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 CCDC112Q8NEF3 446 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 GPRC5AQ8NFJ5 357 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 KIAA1524Q8TCG1 905 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 KCNN1Q92952 543 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 HPS3Q969F9 1004 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 FGD4Q96M96 766 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 MMP19Q99542 508 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 PARVGQ9HBI0 331 aa14.72□□□□□ -0.05
LMNA-220ENST00000504687 IGSF9BQ9UPX0 1349 aa14.71□□□□□ -0.05
LMNA-220ENST00000504687 NPHP3-ACAD11A0A0J9YXS1 232 aa14.71□□□□□ -0.05
LMNA-220ENST00000504687 LGALS16A8MUM7 142 aa14.71□□□□□ -0.05
LMNA-220ENST00000504687 DDX39AO00148 427 aaKnown RBP14.71□□□□□ -0.05
LMNA-220ENST00000504687 YWHABP31946 246 aaKnown RBP14.71□□□□□ -0.05
LMNA-220ENST00000504687 DNM2P50570 870 aa14.71□□□□□ -0.05
LMNA-220ENST00000504687 TRIM14Q14142 442 aa14.71□□□□□ -0.05
LMNA-220ENST00000504687 NEDD9Q14511 834 aa14.71□□□□□ -0.05
LMNA-220ENST00000504687 STXBP4Q6ZWJ1 553 aa14.71□□□□□ -0.05
LMNA-220ENST00000504687 OTUD6AQ7L8S5 288 aa14.71□□□□□ -0.05
LMNA-220ENST00000504687 FILIP1Q7Z7B0 1213 aa14.71□□□□□ -0.05
LMNA-220ENST00000504687 SFR1Q86XK3 245 aa14.71□□□□□ -0.05
LMNA-220ENST00000504687 IQCDQ96DY2 449 aa14.71□□□□□ -0.05
LMNA-220ENST00000504687 FIZ1Q96SL8 496 aa14.71□□□□□ -0.05
LMNA-220ENST00000504687 STRA6Q9BX79 667 aa14.71□□□□□ -0.05
LMNA-220ENST00000504687 TMX1Q9H3N1 280 aa14.71□□□□□ -0.05
LMNA-220ENST00000504687 ST6GALNAC4Q9H4F1 302 aa14.71□□□□□ -0.05
LMNA-220ENST00000504687 ZNF408Q9H9D4 720 aa14.71□□□□□ -0.05
LMNA-220ENST00000504687 SAMM50Q9Y512 469 aa14.71□□□□□ -0.05
LMNA-220ENST00000504687 DOCK5Q9H7D0 1870 aa14.71□□□□□ -0.05
LMNA-220ENST00000504687 ASB14A6NK59 587 aa14.7□□□□□ -0.06
LMNA-220ENST00000504687 N4BP3O15049 544 aa14.7□□□□□ -0.06
LMNA-220ENST00000504687 FAM13AO94988 1023 aa14.7□□□□□ -0.06
LMNA-220ENST00000504687 STBD1O95210 358 aa14.7□□□□□ -0.06
LMNA-220ENST00000504687 TPM2P07951 284 aa14.7□□□□□ -0.06
LMNA-220ENST00000504687 SFPQP23246 707 aaKnown RBP eCLIP14.7□□□□□ -0.06
LMNA-220ENST00000504687 ACTR2P61160 394 aa14.7□□□□□ -0.06
LMNA-220ENST00000504687 CCZ1BP86790 482 aa14.7□□□□□ -0.06
LMNA-220ENST00000504687 CCZ1P86791 482 aaPredicted RBP14.7□□□□□ -0.06
LMNA-220ENST00000504687 MAPK7Q13164 816 aa14.7□□□□□ -0.06
LMNA-220ENST00000504687 KNOP1Q1ED39 458 aaKnown RBP14.7□□□□□ -0.06
LMNA-220ENST00000504687 MIS18BP1Q6P0N0 1132 aa14.7□□□□□ -0.06
LMNA-220ENST00000504687 ARMCX5Q6P1M9 558 aa14.7□□□□□ -0.06
LMNA-220ENST00000504687 PADI6Q6TGC4 694 aa14.7□□□□□ -0.06
LMNA-220ENST00000504687 CNOT6LQ96LI5 555 aaKnown RBP14.7□□□□□ -0.06
LMNA-220ENST00000504687 PARK7Q99497 189 aaKnown RBP14.7□□□□□ -0.06
LMNA-220ENST00000504687 C17orf75Q9HAS0 396 aa14.7□□□□□ -0.06
LMNA-220ENST00000504687 RRAGDQ9NQL2 400 aaPredicted RBP14.7□□□□□ -0.06
LMNA-220ENST00000504687 SPTLC3Q9NUV7 552 aa14.7□□□□□ -0.06
LMNA-220ENST00000504687 DIS3Q9Y2L1 958 aaKnown RBP14.7□□□□□ -0.06
LMNA-220ENST00000504687 PPME1Q9Y570 386 aa14.7□□□□□ -0.06
LMNA-220ENST00000504687 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.7□□□□□ -0.069e-28■■□□□ 11.6
LMNA-220ENST00000504687 MYH9P35579 1960 aaKnown RBP14.7□□□□□ -0.06
LMNA-220ENST00000504687 NRDCO43847 1150 aa14.69□□□□□ -0.06
LMNA-220ENST00000504687 PPP1R37O75864 691 aa14.69□□□□□ -0.06
LMNA-220ENST00000504687 SUPT20HL2P0C7V6 817 aa14.69□□□□□ -0.06
LMNA-220ENST00000504687 SCP2P22307 547 aa14.69□□□□□ -0.06
LMNA-220ENST00000504687 RTP1P59025 263 aa14.69□□□□□ -0.06
LMNA-220ENST00000504687 SNRPFP62306 86 aaKnown RBP14.69□□□□□ -0.06
LMNA-220ENST00000504687 IRF5Q13568 498 aa14.69□□□□□ -0.06
LMNA-220ENST00000504687 MYBPC2Q14324 1141 aa14.69□□□□□ -0.06
LMNA-220ENST00000504687 FAM110CQ1W6H9 321 aa14.69□□□□□ -0.06
LMNA-220ENST00000504687 ZNF720Q7Z2F6 126 aa14.69□□□□□ -0.06
LMNA-220ENST00000504687 DAW1Q8N136 415 aa14.69□□□□□ -0.06
LMNA-220ENST00000504687 SMC1BQ8NDV3 1235 aa14.69□□□□□ -0.06
LMNA-220ENST00000504687 GLIS3Q8NEA6 775 aa14.69□□□□□ -0.06
LMNA-220ENST00000504687 SMCR8Q8TEV9 937 aaPredicted RBP14.69□□□□□ -0.06
LMNA-220ENST00000504687 CCDC51Q96ER9 411 aa14.69□□□□□ -0.06
LMNA-220ENST00000504687 TUBGCP2Q9BSJ2 902 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms