RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 ATAT1Q5SQI0 421 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 CDC37L1Q7L3B6 337 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 DHX32Q7L7V1 743 aaKnown RBP5.95□□□□□ -1.46
NIPBL-204ENST00000504430 CCDC144CPQ8IYA2 1237 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 ZNF687Q8N1G0 1237 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 TMEM102Q8N9M5 508 aaPredicted RBP5.95□□□□□ -1.46
NIPBL-204ENST00000504430 CCDC191Q8NCU4 936 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 C1orf159Q96HA4 380 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 UROC1Q96N76 676 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 NOL6Q9H6R4 1146 aaKnown RBP5.95□□□□□ -1.46
NIPBL-204ENST00000504430 GPRC5CQ9NQ84 441 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 ZKSCAN5Q9Y2L8 839 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 TK2O00142 265 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 GSTP1P09211 210 aaKnown RBP5.95□□□□□ -1.46
NIPBL-204ENST00000504430 CTSSP25774 331 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 EMP3P54852 163 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 INHBEP58166 350 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 CCT2P78371 535 aaKnown RBP5.95□□□□□ -1.46
NIPBL-204ENST00000504430 ATP2B3Q16720 1220 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 FKBP15Q5T1M5 1219 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 SLC22A25Q6T423 547 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 RNF217Q8TC41 542 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 HPS3Q969F9 1004 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 GMCL1Q96IK5 515 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 AOC2O75106 756 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 B3GALNT1O75752 331 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 SNRPB2P08579 225 aaKnown RBP5.94□□□□□ -1.46
NIPBL-204ENST00000504430 GRK2P25098 689 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 ELF1P32519 619 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 PBX2P40425 430 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 DNM2P50570 870 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 GFRA1P56159 465 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 ETF1P62495 437 aaKnown RBP5.94□□□□□ -1.46
NIPBL-204ENST00000504430 NPNTQ6UXI9 565 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 DSTYKQ6XUX3 929 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 GALNTL5Q7Z4T8 443 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 FAM13CQ8NE31 585 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 PBX4Q9BYU1 374 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 MKRN2Q9H000 416 aaKnown RBP5.94□□□□□ -1.46
NIPBL-204ENST00000504430 IL21Q9HBE4 155 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 ABCF3Q9NUQ8 709 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 IKBKGQ9Y6K9 419 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 ABCC9O60706 1549 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 K7ESF4 209 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 PMS1P54277 932 aaKnown RBP5.94□□□□□ -1.46
NIPBL-204ENST00000504430 SPARCL1Q14515 664 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 GTF2IRD2BQ6EKJ0 949 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 POTEGQ6S5H5 508 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 GTF2IRD2Q86UP8 949 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 NLRP14Q86W24 1093 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 RAB11FIP4Q86YS3 637 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 KCNG4Q8TDN1 519 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 SLF1Q9BQI6 1058 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 FAM204AQ9H8W3 233 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 ARMT1Q9H993 441 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 PLSCR4Q9NRQ2 329 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 CCDC39Q9UFE4 941 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 SAMM50Q9Y512 469 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 TRIM38O00635 465 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 SEMA3AQ14563 771 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 LRRC14Q15048 493 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 SMAD2Q15796 467 aaKnown RBP5.94□□□□□ -1.46
NIPBL-204ENST00000504430 TAF12Q16514 161 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 UBE3DQ7Z6J8 389 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 DAAM2Q86T65 1068 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 ANKRD18AQ8IVF6 992 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 TSGA13Q96PP4 275 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 FAM193BQ96PV7 902 aaPredicted RBP5.94□□□□□ -1.46
NIPBL-204ENST00000504430 MAGEH1Q9H213 219 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 OXSMQ9NWU1 459 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 CGGBP1Q9UFW8 167 aaPredicted RBP5.94□□□□□ -1.46
NIPBL-204ENST00000504430 TRIM33Q9UPN9 1127 aa5.94□□□□□ -1.46
NIPBL-204ENST00000504430 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.93□□□□□ -1.46
NIPBL-204ENST00000504430 CFBP00751 764 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 CLEC2LP0C7M8 214 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 JUPP14923 745 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 SSR1P43307 286 aaKnown RBP5.93□□□□□ -1.46
NIPBL-204ENST00000504430 ATXN1P54253 815 aaKnown RBP5.93□□□□□ -1.46
NIPBL-204ENST00000504430 DRG2P55039 364 aaKnown RBP5.93□□□□□ -1.46
NIPBL-204ENST00000504430 KIF23Q02241 960 aaPredicted RBP5.93□□□□□ -1.46
NIPBL-204ENST00000504430 SNW1Q13573 536 aaKnown RBP5.93□□□□□ -1.46
NIPBL-204ENST00000504430 PMS2P11Q13670 270 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 PPM1JQ5JR12 505 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 FAM26FQ5R3K3 315 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 CREB3L3Q68CJ9 461 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 LIN54Q6MZP7 749 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 CPOQ8IVL8 374 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 MIER2Q8N344 545 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 MSANTD4Q8NCY6 345 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 CHST13Q8NET6 341 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 NANOS1Q8WY41 292 aaKnown RBP5.93□□□□□ -1.46
NIPBL-204ENST00000504430 BSNDQ8WZ55 320 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 ELMO3Q96BJ8 720 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 MRGPRX3Q96LB0 322 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 GAS2L1Q99501 681 aaPredicted RBP5.93□□□□□ -1.46
NIPBL-204ENST00000504430 MPHOSPH8Q99549 860 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 NTPCRQ9BSD7 190 aaKnown RBP5.93□□□□□ -1.46
NIPBL-204ENST00000504430 PCDHGB4Q9UN71 923 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 PGPEP1LA6NFU8 196 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 STXBP3O00186 592 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms