RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 KRTAP9-2Q9BYQ4 174 aa6.65□□□□□ -1.34
TRAPPC13-205ENST00000504243 TRIM8Q9BZR9 551 aa6.65□□□□□ -1.34
TRAPPC13-205ENST00000504243 KCTD3Q9Y597 815 aa6.65□□□□□ -1.34
TRAPPC13-205ENST00000504243 WASHC2AQ641Q2 1341 aa6.65□□□□□ -1.35
TRAPPC13-205ENST00000504243 ASGR2P07307 311 aa6.64□□□□□ -1.35
TRAPPC13-205ENST00000504243 FBLN1P23142 703 aa6.64□□□□□ -1.35
TRAPPC13-205ENST00000504243 CCND1P24385 295 aa6.64□□□□□ -1.35
TRAPPC13-205ENST00000504243 CD40P25942 277 aa6.64□□□□□ -1.35
TRAPPC13-205ENST00000504243 NCKAP1LP55160 1127 aa6.64□□□□□ -1.35
TRAPPC13-205ENST00000504243 TERF2Q15554 542 aa6.64□□□□□ -1.35
TRAPPC13-205ENST00000504243 RGL3Q3MIN7 710 aa6.64□□□□□ -1.35
TRAPPC13-205ENST00000504243 SYDE2Q5VT97 1194 aa6.64□□□□□ -1.35
TRAPPC13-205ENST00000504243 CIAPIN1Q6FI81 312 aa6.64□□□□□ -1.35
TRAPPC13-205ENST00000504243 CPA5Q8WXQ8 436 aa6.64□□□□□ -1.35
TRAPPC13-205ENST00000504243 DLG3Q92796 817 aa6.64□□□□□ -1.35
TRAPPC13-205ENST00000504243 ASPSCR1Q9BZE9 553 aa6.64□□□□□ -1.35
TRAPPC13-205ENST00000504243 VTA1Q9NP79 307 aa6.64□□□□□ -1.35
TRAPPC13-205ENST00000504243 AASDHPPTQ9NRN7 309 aa6.64□□□□□ -1.35
TRAPPC13-205ENST00000504243 ARHGAP28Q9P2N2 729 aa6.64□□□□□ -1.35
TRAPPC13-205ENST00000504243 FAN1Q9Y2M0 1017 aa6.64□□□□□ -1.35
TRAPPC13-205ENST00000504243 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.63□□□□□ -1.35
TRAPPC13-205ENST00000504243 GOLGA8AA7E2F4 631 aa6.63□□□□□ -1.35
TRAPPC13-205ENST00000504243 GOLGA8BA8MQT2 603 aa6.63□□□□□ -1.35
TRAPPC13-205ENST00000504243 C4BPAP04003 597 aaKnown RBP6.63□□□□□ -1.35
TRAPPC13-205ENST00000504243 MMEP08473 750 aa6.63□□□□□ -1.35
TRAPPC13-205ENST00000504243 MYBL2P10244 700 aa6.63□□□□□ -1.35
TRAPPC13-205ENST00000504243 SCAND1P57086 179 aa6.63□□□□□ -1.35
TRAPPC13-205ENST00000504243 SMAD3P84022 425 aaKnown RBP6.63□□□□□ -1.35
TRAPPC13-205ENST00000504243 TTF1Q15361 905 aaPredicted RBP6.63□□□□□ -1.35
TRAPPC13-205ENST00000504243 SMAD2Q15796 467 aaKnown RBP6.63□□□□□ -1.35
TRAPPC13-205ENST00000504243 ABCB5Q2M3G0 1257 aa6.63□□□□□ -1.35
TRAPPC13-205ENST00000504243 ZBTB46Q86UZ6 589 aa6.63□□□□□ -1.35
TRAPPC13-205ENST00000504243 AMIGO3Q86WK7 504 aa6.63□□□□□ -1.35
TRAPPC13-205ENST00000504243 TMEM151BQ8IW70 566 aa6.63□□□□□ -1.35
TRAPPC13-205ENST00000504243 ZZZ3Q8IYH5 903 aa6.63□□□□□ -1.35
TRAPPC13-205ENST00000504243 RTF1Q92541 710 aaKnown RBP6.63□□□□□ -1.35
TRAPPC13-205ENST00000504243 TOE1Q96GM8 510 aaKnown RBP6.63□□□□□ -1.35
TRAPPC13-205ENST00000504243 GBP4Q96PP9 640 aa6.63□□□□□ -1.35
TRAPPC13-205ENST00000504243 MS4A5Q9H3V2 200 aa6.63□□□□□ -1.35
TRAPPC13-205ENST00000504243 C14orf119Q9NWQ9 140 aa6.63□□□□□ -1.35
TRAPPC13-205ENST00000504243 KDM1AO60341 852 aa6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 APOL3O95236 402 aa6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 MT-CO1P00395 513 aa6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 FAHP16930 419 aa6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 IGFBP6P24592 240 aaPredicted RBP6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 STAT5AP42229 794 aa6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 CACNB2Q08289 660 aaPredicted RBP6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 KRTAP19-4Q3LI73 84 aa6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 CNKSR3Q6P9H4 555 aa6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 PGM2L1Q6PCE3 622 aa6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 CD300LDQ6UXZ3 194 aa6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 ETV3LQ6ZN32 361 aa6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 RASSF3Q86WH2 238 aa6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 KRTAP19-1Q8IUB9 90 aa6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 CILP2Q8IUL8 1156 aa6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 TMEFF1Q8IYR6 380 aa6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 ZNF610Q8N9Z0 462 aa6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 PCDH18Q9HCL0 1135 aa6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 NGRNQ9NPE2 291 aaKnown RBP6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 DTLQ9NZJ0 730 aa6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 KCNG1Q9UIX4 513 aa6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 MSRAQ9UJ68 235 aa6.62□□□□□ -1.35
TRAPPC13-205ENST00000504243 PRAMEF22A3QJZ6 481 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 LCHNA4D1U4 455 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 ACOT7O00154 380 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 NUAK1O60285 661 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 PI3P19957 117 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 CFPP27918 469 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 NEK2P51955 445 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 NKX3-2P78367 333 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 FOXO4P98177 505 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 SSPNQ14714 243 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 CLUL1Q15846 466 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 PTPN21Q16825 1174 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 CATSPEREQ5SY80 951 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 PRAMEF18Q5VWM3 479 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 FRMD7Q6ZUT3 714 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 B3GNT8Q7Z7M8 397 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 ZC3H18Q86VM9 953 aaKnown RBP6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 FAM129CQ86XR2 697 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 MIB1Q86YT6 1006 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 AMOTL1Q8IY63 956 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 LRRC56Q8IYG6 542 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 C7orf31Q8N865 590 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 TUBGCP5Q96RT8 1024 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 ZMAT4Q9H898 229 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 TOPORSQ9NS56 1045 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 EID1Q9Y6B2 187 aa6.61□□□□□ -1.35
TRAPPC13-205ENST00000504243 KRTAP9-6A0A140TA67 174 aa6.6□□□□□ -1.35
TRAPPC13-205ENST00000504243 GABRDO14764 452 aa6.6□□□□□ -1.35
TRAPPC13-205ENST00000504243 FBXO21O94952 628 aa6.6□□□□□ -1.35
TRAPPC13-205ENST00000504243 PARNO95453 639 aaKnown RBP6.6□□□□□ -1.35
TRAPPC13-205ENST00000504243 ATF2P15336 505 aa6.6□□□□□ -1.35
TRAPPC13-205ENST00000504243 SDHAP31040 664 aa6.6□□□□□ -1.35
TRAPPC13-205ENST00000504243 IARSP41252 1262 aaKnown RBP6.6□□□□□ -1.35
TRAPPC13-205ENST00000504243 FNTBP49356 437 aa6.6□□□□□ -1.35
TRAPPC13-205ENST00000504243 HERVK_113P62684 666 aa6.6□□□□□ -1.35
TRAPPC13-205ENST00000504243 PHC1P78364 1004 aa6.6□□□□□ -1.35
TRAPPC13-205ENST00000504243 CAP1Q01518 475 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms