RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 RLBP1P12271 317 aa14.62□□□□□ -0.07
LSM6-204ENST00000504181 CDC37Q16543 378 aaPredicted RBP14.62□□□□□ -0.07
LSM6-204ENST00000504181 VARS2Q5ST30 1063 aaKnown RBP14.62□□□□□ -0.07
LSM6-204ENST00000504181 KIAA1841Q6NSI8 718 aa14.62□□□□□ -0.07
LSM6-204ENST00000504181 KANK3Q6NY19 840 aa14.62□□□□□ -0.07
LSM6-204ENST00000504181 RSPH3Q86UC2 560 aa14.62□□□□□ -0.07
LSM6-204ENST00000504181 MCF2L2Q86YR7 1114 aa14.62□□□□□ -0.07
LSM6-204ENST00000504181 C12orf76Q8N812 135 aaPredicted RBP14.62□□□□□ -0.07
LSM6-204ENST00000504181 DNAJB3Q8WWF6 145 aa14.62□□□□□ -0.07
LSM6-204ENST00000504181 SEC62Q99442 399 aaKnown RBP14.62□□□□□ -0.07
LSM6-204ENST00000504181 USP26Q9BXU7 913 aa14.62□□□□□ -0.07
LSM6-204ENST00000504181 FTHL17Q9BXU8 183 aa14.62□□□□□ -0.07
LSM6-204ENST00000504181 USTQ9Y2C2 406 aa14.62□□□□□ -0.07
LSM6-204ENST00000504181 LAMA4Q16363 1823 aa14.62□□□□□ -0.07
LSM6-204ENST00000504181 KRBA1A5PL33 1030 aa14.61□□□□□ -0.07
LSM6-204ENST00000504181 TBKBP1A7MCY6 615 aa14.61□□□□□ -0.07
LSM6-204ENST00000504181 PRR5-ARHGAP8B1AHC4 643 aa14.61□□□□□ -0.07
LSM6-204ENST00000504181 NARSO43776 548 aaKnown RBP14.61□□□□□ -0.07
LSM6-204ENST00000504181 CFBP00751 764 aa14.61□□□□□ -0.07
LSM6-204ENST00000504181 DCNP07585 359 aaKnown RBP14.61□□□□□ -0.07
LSM6-204ENST00000504181 CFHP08603 1231 aa14.61□□□□□ -0.07
LSM6-204ENST00000504181 GOLGA8HP0CJ92 632 aa14.61□□□□□ -0.07
LSM6-204ENST00000504181 HSPD1P10809 573 aaKnown RBP14.61□□□□□ -0.07
LSM6-204ENST00000504181 ARHGAP8P85298 464 aa14.61□□□□□ -0.07
LSM6-204ENST00000504181 UTP14CQ5TAP6 766 aaKnown RBP14.61□□□□□ -0.07
LSM6-204ENST00000504181 IL31RAQ8NI17 732 aa14.61□□□□□ -0.07
LSM6-204ENST00000504181 MRPS27Q92552 414 aaKnown RBP14.61□□□□□ -0.07
LSM6-204ENST00000504181 PDCD2LQ9BRP1 358 aa14.61□□□□□ -0.07
LSM6-204ENST00000504181 UBA5Q9GZZ9 404 aa14.61□□□□□ -0.07
LSM6-204ENST00000504181 MAF1Q9H063 256 aa14.61□□□□□ -0.07
LSM6-204ENST00000504181 ZNF215Q9UL58 517 aaPredicted RBP14.61□□□□□ -0.07
LSM6-204ENST00000504181 SPEGQ15772 3267 aa14.61□□□□□ -0.07
LSM6-204ENST00000504181 LMNB2Q03252 620 aa14.6□□□□□ -0.07
LSM6-204ENST00000504181 DMWDQ09019 674 aa14.6□□□□□ -0.07
LSM6-204ENST00000504181 TBC1D8BQ0IIM8 1120 aa14.6□□□□□ -0.07
LSM6-204ENST00000504181 PPM1JQ5JR12 505 aa14.6□□□□□ -0.07
LSM6-204ENST00000504181 TAF2Q6P1X5 1199 aa14.6□□□□□ -0.07
LSM6-204ENST00000504181 TMC7Q7Z402 723 aa14.6□□□□□ -0.07
LSM6-204ENST00000504181 C1orf210Q8IVY1 113 aa14.6□□□□□ -0.07
LSM6-204ENST00000504181 GPR161Q8N6U8 529 aaKnown RBP14.6□□□□□ -0.07
LSM6-204ENST00000504181 TBC1D17Q9HA65 648 aa14.6□□□□□ -0.07
LSM6-204ENST00000504181 NGRNQ9NPE2 291 aaKnown RBP14.6□□□□□ -0.07
LSM6-204ENST00000504181 TOMM22Q9NS69 142 aa14.6□□□□□ -0.07
LSM6-204ENST00000504181 TYW1Q9NV66 732 aaKnown RBP14.6□□□□□ -0.07
LSM6-204ENST00000504181 CA14Q9ULX7 337 aa14.6□□□□□ -0.07
LSM6-204ENST00000504181 LZTS1Q9Y250 596 aa14.6□□□□□ -0.07
LSM6-204ENST00000504181 NRCAMQ92823 1304 aa14.6□□□□□ -0.07
LSM6-204ENST00000504181 GCN1Q92616 2671 aaKnown RBP14.59□□□□□ -0.07
LSM6-204ENST00000504181 TGFB3P10600 412 aa14.59□□□□□ -0.07
LSM6-204ENST00000504181 MRPS6P82932 125 aaKnown RBP14.59□□□□□ -0.07
LSM6-204ENST00000504181 PGM5Q15124 567 aa14.59□□□□□ -0.07
LSM6-204ENST00000504181 ATAT1Q5SQI0 421 aa14.59□□□□□ -0.07
LSM6-204ENST00000504181 FAM102BQ5T8I3 360 aa14.59□□□□□ -0.07
LSM6-204ENST00000504181 XRRA1Q6P2D8 792 aa14.59□□□□□ -0.07
LSM6-204ENST00000504181 FEZF2Q8TBJ5 459 aa14.59□□□□□ -0.07
LSM6-204ENST00000504181 ACSF2Q96CM8 615 aaPredicted RBP14.59□□□□□ -0.07
LSM6-204ENST00000504181 GPR20Q99678 358 aa14.59□□□□□ -0.07
LSM6-204ENST00000504181 KCNK12Q9HB15 430 aa14.59□□□□□ -0.07
LSM6-204ENST00000504181 PUF60Q9UHX1 559 aaKnown RBP14.59□□□□□ -0.07
LSM6-204ENST00000504181 PADI3Q9ULW8 664 aa14.59□□□□□ -0.07
LSM6-204ENST00000504181 USP18Q9UMW8 372 aa14.59□□□□□ -0.07
LSM6-204ENST00000504181 TELO2Q9Y4R8 837 aa14.59□□□□□ -0.07
LSM6-204ENST00000504181 PCDHB7Q9Y5E2 793 aa14.59□□□□□ -0.07
LSM6-204ENST00000504181 CEP295Q9C0D2 2601 aa14.59□□□□□ -0.07
LSM6-204ENST00000504181 POTEMA6NI47 508 aa14.58□□□□□ -0.08
LSM6-204ENST00000504181 RAB11FIP3O75154 756 aa14.58□□□□□ -0.08
LSM6-204ENST00000504181 ZFYP08048 801 aaPredicted RBP14.58□□□□□ -0.08
LSM6-204ENST00000504181 SNHG28P0DPA3 235 aa14.58□□□□□ -0.08
LSM6-204ENST00000504181 CA8P35219 290 aa14.58□□□□□ -0.08
LSM6-204ENST00000504181 SARSP49591 514 aaKnown RBP14.58□□□□□ -0.08
LSM6-204ENST00000504181 PAK2Q13177 524 aa14.58□□□□□ -0.08
LSM6-204ENST00000504181 RRP12Q5JTH9 1297 aaKnown RBP14.58□□□□□ -0.08
LSM6-204ENST00000504181 POTEGQ6S5H5 508 aa14.58□□□□□ -0.08
LSM6-204ENST00000504181 CYFIP1Q7L576 1253 aa14.58□□□□□ -0.08
LSM6-204ENST00000504181 CWH43Q9H720 699 aa14.58□□□□□ -0.08
LSM6-204ENST00000504181 TUBE1Q9UJT0 475 aa14.58□□□□□ -0.08
LSM6-204ENST00000504181 MRPL11Q9Y3B7 192 aaKnown RBP14.58□□□□□ -0.08
LSM6-204ENST00000504181 CLASP2O75122 1294 aaKnown RBP14.57□□□□□ -0.08
LSM6-204ENST00000504181 LAG3P18627 525 aa14.57□□□□□ -0.08
LSM6-204ENST00000504181 PLCB3Q01970 1234 aa14.57□□□□□ -0.08
LSM6-204ENST00000504181 SP4Q02446 784 aa14.57□□□□□ -0.08
LSM6-204ENST00000504181 TMEM62Q0P6H9 643 aa14.57□□□□□ -0.08
LSM6-204ENST00000504181 VSIG10LQ86VR7 867 aa14.57□□□□□ -0.08
LSM6-204ENST00000504181 ZBTB10Q96DT7 871 aa14.57□□□□□ -0.08
LSM6-204ENST00000504181 FAM49AQ9H0Q0 323 aaPredicted RBP14.57□□□□□ -0.08
LSM6-204ENST00000504181 DLGAP2Q9P1A6 1054 aa14.57□□□□□ -0.08
LSM6-204ENST00000504181 WNT16Q9UBV4 365 aa14.57□□□□□ -0.08
LSM6-204ENST00000504181 COL4A3Q01955 1670 aa14.57□□□□□ -0.08
LSM6-204ENST00000504181 BAZ2BQ9UIF8 2168 aaKnown RBP14.57□□□□□ -0.08
LSM6-204ENST00000504181 CNOT1A5YKK6 2376 aaKnown RBP14.56□□□□□ -0.08
LSM6-204ENST00000504181 NBEAQ8NFP9 2946 aa14.56□□□□□ -0.08
LSM6-204ENST00000504181 C2orf71A6NGG8 1288 aa14.56□□□□□ -0.08
LSM6-204ENST00000504181 ORC4O43929 436 aa14.56□□□□□ -0.08
LSM6-204ENST00000504181 CCND2P30279 289 aa14.56□□□□□ -0.08
LSM6-204ENST00000504181 PBX3P40426 434 aa14.56□□□□□ -0.08
LSM6-204ENST00000504181 HSD17B4P51659 736 aa14.56□□□□□ -0.08
LSM6-204ENST00000504181 PPFIA1Q13136 1202 aa14.56□□□□□ -0.08
LSM6-204ENST00000504181 SMC1AQ14683 1233 aaKnown RBP14.56□□□□□ -0.08
LSM6-204ENST00000504181 GRIK4Q16099 956 aa14.56□□□□□ -0.08
LSM6-204ENST00000504181 QRICH1Q2TAL8 776 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms