RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 A0A0G2JMZ2 1700 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 MANSC4A6NHS7 340 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 F5H6K3 240 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 SH3BP5O60239 455 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 DDAH1O94760 285 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 NDUFB10O96000 172 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 IDO1P14902 403 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 PSMD7P51665 324 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 NEK4P51957 841 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 HMGCS2P54868 508 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 KLRC3Q07444 240 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 IFFO1Q0D2I5 559 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 NOGQ13253 232 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 CYP4F22Q6NT55 531 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 APOA5Q6Q788 366 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 DDX12PQ92771 950 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 CAPNS2Q96L46 248 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 CAPS2Q9BXY5 557 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 PREBQ9HCU5 417 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 TUBA8Q9NY65 449 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 ITGB1BP2Q9UKP3 347 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 RAB21Q9UL25 225 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 TMED5Q9Y3A6 229 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 LSM1O15116 133 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 WDR46O15213 610 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 EVI5O60447 810 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 CETPP11597 493 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 BDNFP23560 247 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 AK2P54819 239 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 OXCT1P55809 520 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 DGKZQ13574 1117 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 ANKRD1Q15327 319 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 TSR1Q2NL82 804 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 EMC10Q5UCC4 262 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 FASTKD5Q7L8L6 764 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 ZNF654Q8IZM8 581 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 FUKQ8N0W3 1084 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 RASSF8Q8NHQ8 419 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 BCAS4Q8TDM0 211 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 DCAF4Q8WV16 495 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 GIMAP1Q8WWP7 306 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 BRI3BPQ8WY22 251 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 LZICQ8WZA0 190 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 BRF1Q92994 677 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 NUP58Q9BVL2 599 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 ZFATQ9P243 1243 aa10.53□□□□□ -0.72
PDLIM5-207ENST00000503974 PALM3A6NDB9 673 aaPredicted RBP10.52□□□□□ -0.73
PDLIM5-207ENST00000503974 RNF40O75150 1001 aa10.52□□□□□ -0.73
PDLIM5-207ENST00000503974 CNGA1P29973 690 aa10.52□□□□□ -0.73
PDLIM5-207ENST00000503974 AARSP49588 968 aaKnown RBP eCLIP10.52□□□□□ -0.73
PDLIM5-207ENST00000503974 NEK2P51955 445 aa10.52□□□□□ -0.73
PDLIM5-207ENST00000503974 HTRA3P83110 453 aa10.52□□□□□ -0.73
PDLIM5-207ENST00000503974 DRP2Q13474 957 aa10.52□□□□□ -0.73
PDLIM5-207ENST00000503974 SLFN13Q68D06 897 aa10.52□□□□□ -0.73
PDLIM5-207ENST00000503974 GPAT2Q6NUI2 795 aa10.52□□□□□ -0.73
PDLIM5-207ENST00000503974 CCDC13Q8IYE1 715 aa10.52□□□□□ -0.73
PDLIM5-207ENST00000503974 GBP3Q9H0R5 595 aa10.52□□□□□ -0.73
PDLIM5-207ENST00000503974 CBX8Q9HC52 389 aa10.52□□□□□ -0.73
PDLIM5-207ENST00000503974 ZNHIT6Q9NWK9 470 aaKnown RBP10.52□□□□□ -0.73
PDLIM5-207ENST00000503974 DDX25Q9UHL0 483 aaKnown RBP10.52□□□□□ -0.73
PDLIM5-207ENST00000503974 TMCO1Q9UM00 188 aa10.52□□□□□ -0.73
PDLIM5-207ENST00000503974 AGTPBP1Q9UPW5 1226 aa10.52□□□□□ -0.73
PDLIM5-207ENST00000503974 C15orf41Q9Y2V0 281 aa10.52□□□□□ -0.73
PDLIM5-207ENST00000503974 SLC45A1Q9Y2W3 748 aa10.52□□□□□ -0.73
PDLIM5-207ENST00000503974 CCL15-CCL14A0A0B4J2E2 113 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 GOLGA8AA7E2F4 631 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 ST18O60284 1047 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 PLA2G6O60733 806 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 PHACTR2O75167 634 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 URI1O94763 535 aaPredicted RBP10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 BCRP11274 1271 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 FUT4P22083 530 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 HOXA7P31268 230 aaPredicted RBP10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 TM4SF4P48230 202 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 CTCFP49711 727 aaPredicted RBP10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 GNL2Q13823 731 aaKnown RBP10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 GRM4Q14833 912 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 ZYXQ15942 572 aaKnown RBP10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 CCL15Q16663 113 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 THOC7Q6I9Y2 204 aaKnown RBP10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 RASGRP2Q7LDG7 609 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 REM2Q8IYK8 340 aaPredicted RBP10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 SMARCC2Q8TAQ2 1214 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 IWS1Q96ST2 819 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 SEL1LQ9UBV2 794 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 ASB3Q9Y575 518 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 TIMM22Q9Y584 194 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 WDR33Q9C0J8 1336 aaKnown RBP10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 KLF18A0A0U1RQI7 1052 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 EIF3HO15372 352 aaKnown RBP eCLIP10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 P4HA2O15460 535 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 CALM1P0DP23 149 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 CALM2P0DP24 149 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 CALM3P0DP25 149 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 TGFB3P10600 412 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 HOXD12P35452 270 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 TCF7P36402 384 aaPredicted RBP10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 PSMC4P43686 418 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 VEGFBP49765 207 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 ZNF132P52740 706 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms