RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 GBP4Q96PP9 640 aa8.18□□□□□ -1.1
NIPBL-203ENST00000503274 OXSMQ9NWU1 459 aa8.18□□□□□ -1.1
NIPBL-203ENST00000503274 BTBD7Q9P203 1132 aa8.18□□□□□ -1.1
NIPBL-203ENST00000503274 ARHGAP20Q9P2F6 1191 aa8.18□□□□□ -1.1
NIPBL-203ENST00000503274 RASSF10A6NK89 507 aa8.17□□□□□ -1.1
NIPBL-203ENST00000503274 GLRBP48167 497 aa8.17□□□□□ -1.1
NIPBL-203ENST00000503274 PRR31Q5SQ13 230 aa8.17□□□□□ -1.1
NIPBL-203ENST00000503274 PHF19Q5T6S3 580 aa8.17□□□□□ -1.1
NIPBL-203ENST00000503274 CREB3L3Q68CJ9 461 aa8.17□□□□□ -1.1
NIPBL-203ENST00000503274 DDX46Q7L014 1031 aaKnown RBP8.17□□□□□ -1.1
NIPBL-203ENST00000503274 KRT26Q7Z3Y9 468 aa8.17□□□□□ -1.1
NIPBL-203ENST00000503274 ADGRG2Q8IZP9 1017 aa8.17□□□□□ -1.1
NIPBL-203ENST00000503274 UBR7Q8N806 425 aa8.17□□□□□ -1.1
NIPBL-203ENST00000503274 TP53I13Q8NBR0 393 aaPredicted RBP8.17□□□□□ -1.1
NIPBL-203ENST00000503274 SMC1BQ8NDV3 1235 aa8.17□□□□□ -1.1
NIPBL-203ENST00000503274 CHTF18Q8WVB6 975 aa8.17□□□□□ -1.1
NIPBL-203ENST00000503274 THG1LQ9NWX6 298 aaKnown RBP8.17□□□□□ -1.1
NIPBL-203ENST00000503274 ASB1Q9Y576 335 aa8.17□□□□□ -1.1
NIPBL-203ENST00000503274 A0A1B0GTL3 188 aa8.16□□□□□ -1.1
NIPBL-203ENST00000503274 FBXO21O94952 628 aa8.16□□□□□ -1.1
NIPBL-203ENST00000503274 CYP17A1P05093 508 aa8.16□□□□□ -1.1
NIPBL-203ENST00000503274 VIL1P09327 827 aaKnown RBP8.16□□□□□ -1.1
NIPBL-203ENST00000503274 ZSCAN22P10073 491 aaPredicted RBP8.16□□□□□ -1.1
NIPBL-203ENST00000503274 SLC9A1P19634 815 aa8.16□□□□□ -1.1
NIPBL-203ENST00000503274 FNTBP49356 437 aa8.16□□□□□ -1.1
NIPBL-203ENST00000503274 SARSP49591 514 aaKnown RBP8.16□□□□□ -1.1
NIPBL-203ENST00000503274 ZNF662Q6ZS27 426 aa8.16□□□□□ -1.1
NIPBL-203ENST00000503274 HIPK4Q8NE63 616 aa8.16□□□□□ -1.1
NIPBL-203ENST00000503274 ELF4Q99607 663 aaPredicted RBP8.16□□□□□ -1.1
NIPBL-203ENST00000503274 KRTAP4-9Q9BYQ8 210 aa8.16□□□□□ -1.1
NIPBL-203ENST00000503274 INCENPQ9NQS7 918 aa8.16□□□□□ -1.1
NIPBL-203ENST00000503274 ZFP69BQ9UJL9 534 aa8.16□□□□□ -1.1
NIPBL-203ENST00000503274 SPO11Q9Y5K1 396 aa8.16□□□□□ -1.1
NIPBL-203ENST00000503274 MC4RP32245 332 aa8.15□□□□□ -1.1
NIPBL-203ENST00000503274 IL13P35225 146 aa8.15□□□□□ -1.1
NIPBL-203ENST00000503274 KPNA1P52294 538 aaPredicted RBP8.15□□□□□ -1.1
NIPBL-203ENST00000503274 MLLT6P55198 1093 aaPredicted RBP8.15□□□□□ -1.1
NIPBL-203ENST00000503274 OCRLQ01968 901 aa8.15□□□□□ -1.1
NIPBL-203ENST00000503274 DHCR24Q15392 516 aa8.15□□□□□ -1.1
NIPBL-203ENST00000503274 KRTAP19-4Q3LI73 84 aa8.15□□□□□ -1.1
NIPBL-203ENST00000503274 RNF187Q5TA31 235 aaPredicted RBP8.15□□□□□ -1.1
NIPBL-203ENST00000503274 PRAMEF18Q5VWM3 479 aa8.15□□□□□ -1.1
NIPBL-203ENST00000503274 SIAH1Q8IUQ4 282 aa8.15□□□□□ -1.1
NIPBL-203ENST00000503274 CARFQ8N187 725 aa8.15□□□□□ -1.1
NIPBL-203ENST00000503274 EFHBQ8N7U6 833 aa8.15□□□□□ -1.1
NIPBL-203ENST00000503274 GPR101Q96P66 508 aaPredicted RBP8.15□□□□□ -1.1
NIPBL-203ENST00000503274 SPC25Q9HBM1 224 aa8.15□□□□□ -1.1
NIPBL-203ENST00000503274 UCKL1Q9NWZ5 548 aa8.15□□□□□ -1.1
NIPBL-203ENST00000503274 GALNT8Q9NY28 637 aa8.15□□□□□ -1.1
NIPBL-203ENST00000503274 H2AFY2Q9P0M6 372 aaPredicted RBP8.15□□□□□ -1.1
NIPBL-203ENST00000503274 LOC105371045A0A1W2PR82 267 aa8.14□□□□□ -1.11
NIPBL-203ENST00000503274 PRAMEF22A3QJZ6 481 aa8.14□□□□□ -1.11
NIPBL-203ENST00000503274 GOLGA6L22H0YM25 854 aa8.14□□□□□ -1.11
NIPBL-203ENST00000503274 DDX3XO00571 662 aaKnown RBP eCLIP8.14□□□□□ -1.11
NIPBL-203ENST00000503274 IL18BPO95998 194 aa8.14□□□□□ -1.11
NIPBL-203ENST00000503274 ZNF28P17035 718 aa8.14□□□□□ -1.11
NIPBL-203ENST00000503274 IL2P60568 153 aa8.14□□□□□ -1.11
NIPBL-203ENST00000503274 SMAD2Q15796 467 aaKnown RBP8.14□□□□□ -1.11
NIPBL-203ENST00000503274 CT47A1Q5JQC4 288 aaPredicted RBP8.14□□□□□ -1.11
NIPBL-203ENST00000503274 SPOCD1Q6ZMY3 1216 aa8.14□□□□□ -1.11
NIPBL-203ENST00000503274 STPG3Q8N7X2 389 aa8.14□□□□□ -1.11
NIPBL-203ENST00000503274 ERCC4Q92889 916 aaPredicted RBP8.14□□□□□ -1.11
NIPBL-203ENST00000503274 USP7Q93009 1102 aa8.14□□□□□ -1.11
NIPBL-203ENST00000503274 TACO1Q9BSH4 297 aaKnown RBP8.14□□□□□ -1.11
NIPBL-203ENST00000503274 KCND1Q9NSA2 647 aa8.14□□□□□ -1.11
NIPBL-203ENST00000503274 DNAJC6O75061 913 aa8.13□□□□□ -1.11
NIPBL-203ENST00000503274 FKBP9O95302 570 aa8.13□□□□□ -1.11
NIPBL-203ENST00000503274 MPIG6BO95866 241 aa8.13□□□□□ -1.11
NIPBL-203ENST00000503274 CHGBP05060 677 aa8.13□□□□□ -1.11
NIPBL-203ENST00000503274 PTX3P26022 381 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-203ENST00000503274 CANXP27824 592 aaKnown RBP8.13□□□□□ -1.11
NIPBL-203ENST00000503274 CNGA1P29973 690 aa8.13□□□□□ -1.11
NIPBL-203ENST00000503274 ADCYAP1R1P41586 468 aa8.13□□□□□ -1.11
NIPBL-203ENST00000503274 LSSP48449 732 aa8.13□□□□□ -1.11
NIPBL-203ENST00000503274 SLURP1P55000 103 aa8.13□□□□□ -1.11
NIPBL-203ENST00000503274 TRMT10BQ6PF06 316 aaKnown RBP8.13□□□□□ -1.11
NIPBL-203ENST00000503274 DPP8Q6V1X1 898 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-203ENST00000503274 LCNL1Q6ZST4 164 aa8.13□□□□□ -1.11
NIPBL-203ENST00000503274 FKBP9P1Q75LS8 142 aa8.13□□□□□ -1.11
NIPBL-203ENST00000503274 FILIP1Q7Z7B0 1213 aa8.13□□□□□ -1.11
NIPBL-203ENST00000503274 STRA8Q7Z7C7 330 aa8.13□□□□□ -1.11
NIPBL-203ENST00000503274 PASD1Q8IV76 773 aa8.13□□□□□ -1.11
NIPBL-203ENST00000503274 FOXRED1Q96CU9 486 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-203ENST00000503274 SCYL1Q96KG9 808 aa8.13□□□□□ -1.11
NIPBL-203ENST00000503274 AMNQ9BXJ7 453 aa8.13□□□□□ -1.11
NIPBL-203ENST00000503274 L2HGDHQ9H9P8 463 aa8.13□□□□□ -1.11
NIPBL-203ENST00000503274 TOMM22Q9NS69 142 aa8.13□□□□□ -1.11
NIPBL-203ENST00000503274 BPIP17213 487 aa8.12□□□□□ -1.11
NIPBL-203ENST00000503274 STRN3Q13033 797 aa8.12□□□□□ -1.11
NIPBL-203ENST00000503274 RTN4RL1Q86UN2 441 aaPredicted RBP8.12□□□□□ -1.11
NIPBL-203ENST00000503274 C11orf74Q86VG3 221 aa8.12□□□□□ -1.11
NIPBL-203ENST00000503274 NME9Q86XW9 330 aa8.12□□□□□ -1.11
NIPBL-203ENST00000503274 ZCCHC14Q8WYQ9 949 aaKnown RBP8.12□□□□□ -1.11
NIPBL-203ENST00000503274 E2F7Q96AV8 911 aa8.12□□□□□ -1.11
NIPBL-203ENST00000503274 C16orf92Q96LL3 132 aa8.12□□□□□ -1.11
NIPBL-203ENST00000503274 SPATA25Q9BR10 227 aa8.12□□□□□ -1.11
NIPBL-203ENST00000503274 SPTLC3Q9NUV7 552 aa8.12□□□□□ -1.11
NIPBL-203ENST00000503274 TRIM13O60858 407 aa8.11□□□□□ -1.11
NIPBL-203ENST00000503274 KNG1P01042 644 aa8.11□□□□□ -1.11
NIPBL-203ENST00000503274 COL6A1P12109 1028 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms