RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 TAF2Q6P1X5 1199 aa13.34□□□□□ -0.27
TNPO1-202ENST00000503084 SECISBP2LQ93073 1101 aaKnown RBP13.34□□□□□ -0.27
TNPO1-202ENST00000503084 ACSF2Q96CM8 615 aaPredicted RBP13.34□□□□□ -0.27
TNPO1-202ENST00000503084 BCAS3Q9H6U6 928 aa13.34□□□□□ -0.27
TNPO1-202ENST00000503084 NGRNQ9NPE2 291 aaKnown RBP13.34□□□□□ -0.27
TNPO1-202ENST00000503084 WNT16Q9UBV4 365 aa13.34□□□□□ -0.27
TNPO1-202ENST00000503084 LRFN2Q9ULH4 789 aa13.34□□□□□ -0.27
TNPO1-202ENST00000503084 SMG1Q96Q15 3661 aaKnown RBP13.34□□□□□ -0.27
TNPO1-202ENST00000503084 HELZ2Q9BYK8 2649 aaKnown RBP13.33□□□□□ -0.28
TNPO1-202ENST00000503084 TBKBP1A7MCY6 615 aa13.33□□□□□ -0.28
TNPO1-202ENST00000503084 M0R2C6 588 aa13.33□□□□□ -0.28
TNPO1-202ENST00000503084 CLASP2O75122 1294 aaKnown RBP13.33□□□□□ -0.28
TNPO1-202ENST00000503084 SLC3A2P08195 630 aaKnown RBP13.33□□□□□ -0.28
TNPO1-202ENST00000503084 PDHBP11177 359 aa13.33□□□□□ -0.28
TNPO1-202ENST00000503084 ATAT1Q5SQI0 421 aa13.33□□□□□ -0.28
TNPO1-202ENST00000503084 IFNL3Q8IZI9 196 aa13.33□□□□□ -0.28
TNPO1-202ENST00000503084 NETO1Q8TDF5 533 aa13.33□□□□□ -0.28
TNPO1-202ENST00000503084 APPBP2Q92624 585 aa13.33□□□□□ -0.28
TNPO1-202ENST00000503084 FTHL17Q9BXU8 183 aa13.33□□□□□ -0.28
TNPO1-202ENST00000503084 MLXIPQ9HAP2 919 aa13.33□□□□□ -0.28
TNPO1-202ENST00000503084 SIT1Q9Y3P8 196 aa13.33□□□□□ -0.28
TNPO1-202ENST00000503084 ITPR1Q14643 2758 aa13.32□□□□□ -0.28
TNPO1-202ENST00000503084 NAV2Q8IVL1 2488 aa13.32□□□□□ -0.28
TNPO1-202ENST00000503084 NOP56O00567 594 aaKnown RBP13.32□□□□□ -0.28
TNPO1-202ENST00000503084 PROS1P07225 676 aa13.32□□□□□ -0.28
TNPO1-202ENST00000503084 GNAT2P19087 354 aa13.32□□□□□ -0.28
TNPO1-202ENST00000503084 MRPS6P82932 125 aaKnown RBP13.32□□□□□ -0.28
TNPO1-202ENST00000503084 SHC2P98077 582 aa13.32□□□□□ -0.28
TNPO1-202ENST00000503084 PLCB3Q01970 1234 aa13.32□□□□□ -0.28
TNPO1-202ENST00000503084 ZNF543Q08ER8 600 aa13.32□□□□□ -0.28
TNPO1-202ENST00000503084 HSP90AB4PQ58FF6 505 aa13.32□□□□□ -0.28
TNPO1-202ENST00000503084 CCDC149Q6ZUS6 474 aa13.32□□□□□ -0.28
TNPO1-202ENST00000503084 OTOP3Q7RTS5 596 aa13.32□□□□□ -0.28
TNPO1-202ENST00000503084 IL31RAQ8NI17 732 aa13.32□□□□□ -0.28
TNPO1-202ENST00000503084 DNAJB3Q8WWF6 145 aa13.32□□□□□ -0.28
TNPO1-202ENST00000503084 KIF1BPQ96EK5 621 aa13.32□□□□□ -0.28
TNPO1-202ENST00000503084 FOXQ1Q9C009 403 aa13.32□□□□□ -0.28
TNPO1-202ENST00000503084 EPC1Q9H2F5 836 aa13.32□□□□□ -0.28
TNPO1-202ENST00000503084 TYW1Q9NV66 732 aaKnown RBP13.32□□□□□ -0.28
TNPO1-202ENST00000503084 DZANK1Q9NVP4 752 aa13.32□□□□□ -0.28
TNPO1-202ENST00000503084 PUF60Q9UHX1 559 aaKnown RBP13.32□□□□□ -0.28
TNPO1-202ENST00000503084 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.32□□□□□ -0.28
TNPO1-202ENST00000503084 ABCB11O95342 1321 aa13.32□□□□□ -0.28
TNPO1-202ENST00000503084 NRCAMQ92823 1304 aa13.32□□□□□ -0.28
TNPO1-202ENST00000503084 BPTFQ12830 3046 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 KAT6AQ92794 2004 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 C2orf71A6NGG8 1288 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 LRRN2O75325 713 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 MYCLP12524 364 aaPredicted RBP13.31□□□□□ -0.28
TNPO1-202ENST00000503084 LAG3P18627 525 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 PBX3P40426 434 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 SARSP49591 514 aaKnown RBP13.31□□□□□ -0.28
TNPO1-202ENST00000503084 ZNF528Q3MIS6 628 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 KCNV1Q6PIU1 500 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 TMC5Q6UXY8 1006 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 TMC7Q7Z402 723 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 RSPH3Q86UC2 560 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 RSAD2Q8WXG1 361 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 TMEM47Q9BQJ4 181 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 PDCD2LQ9BRP1 358 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 USP26Q9BXU7 913 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 MAF1Q9H063 256 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 CPVLQ9H3G5 476 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 TMX1Q9H3N1 280 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 CWH43Q9H720 699 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 ZNF215Q9UL58 517 aaPredicted RBP13.31□□□□□ -0.28
TNPO1-202ENST00000503084 PADI3Q9ULW8 664 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 TELO2Q9Y4R8 837 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 PCDHGA2Q9Y5H1 932 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 PATJQ8NI35 1801 aa13.31□□□□□ -0.28
TNPO1-202ENST00000503084 DOCK5Q9H7D0 1870 aa13.3□□□□□ -0.28
TNPO1-202ENST00000503084 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.3□□□□□ -0.28
TNPO1-202ENST00000503084 RANBP6O60518 1105 aaKnown RBP13.3□□□□□ -0.28
TNPO1-202ENST00000503084 TOP1P11387 765 aaKnown RBP13.3□□□□□ -0.28
TNPO1-202ENST00000503084 EPCAMP16422 314 aa13.3□□□□□ -0.28
TNPO1-202ENST00000503084 PAK2Q13177 524 aa13.3□□□□□ -0.28
TNPO1-202ENST00000503084 SMC1AQ14683 1233 aaKnown RBP13.3□□□□□ -0.28
TNPO1-202ENST00000503084 CDC37Q16543 378 aaPredicted RBP13.3□□□□□ -0.28
TNPO1-202ENST00000503084 FAM102BQ5T8I3 360 aa13.3□□□□□ -0.28
TNPO1-202ENST00000503084 UTP14CQ5TAP6 766 aaKnown RBP13.3□□□□□ -0.28
TNPO1-202ENST00000503084 PHLDB3Q6NSJ2 640 aa13.3□□□□□ -0.28
TNPO1-202ENST00000503084 PJA1Q8NG27 643 aa13.3□□□□□ -0.28
TNPO1-202ENST00000503084 ZFP91Q96JP5 570 aaPredicted RBP13.3□□□□□ -0.28
TNPO1-202ENST00000503084 GPR20Q99678 358 aa13.3□□□□□ -0.28
TNPO1-202ENST00000503084 ARHGEF3Q9NR81 526 aa13.3□□□□□ -0.28
TNPO1-202ENST00000503084 IGSF9Q9P2J2 1179 aa13.3□□□□□ -0.28
TNPO1-202ENST00000503084 TUBE1Q9UJT0 475 aa13.3□□□□□ -0.28
TNPO1-202ENST00000503084 ZMIZ1Q9ULJ6 1067 aa13.3□□□□□ -0.28
TNPO1-202ENST00000503084 U3KPZ7 1027 aaPredicted RBP13.3□□□□□ -0.28
TNPO1-202ENST00000503084 UNC79Q9P2D8 2635 aa13.3□□□□□ -0.28
TNPO1-202ENST00000503084 PATL2C9JE40 543 aaKnown RBP13.29□□□□□ -0.28
TNPO1-202ENST00000503084 ZIC2O95409 532 aaPredicted RBP13.29□□□□□ -0.28
TNPO1-202ENST00000503084 HSPD1P10809 573 aaKnown RBP13.29□□□□□ -0.28
TNPO1-202ENST00000503084 PDE4AP27815 886 aa13.29□□□□□ -0.28
TNPO1-202ENST00000503084 CTDSPL2Q05D32 466 aa13.29□□□□□ -0.28
TNPO1-202ENST00000503084 PPFIA1Q13136 1202 aa13.29□□□□□ -0.28
TNPO1-202ENST00000503084 MCF2L2Q86YR7 1114 aa13.29□□□□□ -0.28
TNPO1-202ENST00000503084 MRPL43Q8N983 215 aaKnown RBP13.29□□□□□ -0.28
TNPO1-202ENST00000503084 GPR152Q8TDT2 470 aa13.29□□□□□ -0.28
TNPO1-202ENST00000503084 ATRIPQ8WXE1 791 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms