RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 GABPAQ06546 454 aa26.77■■□□□ 1.88
DDX41-202ENST00000503078 MFSD14BQ5SR56 506 aa26.77■■□□□ 1.88
DDX41-202ENST00000503078 TTBK2Q6IQ55 1244 aa26.77■■□□□ 1.88
DDX41-202ENST00000503078 TRAF3IP3Q9Y228 551 aa26.77■■□□□ 1.88
DDX41-202ENST00000503078 ATF5Q9Y2D1 282 aaPredicted RBP26.77■■□□□ 1.88
DDX41-202ENST00000503078 SPATA31A6Q5VVP1 1343 aa26.77■■□□□ 1.88
DDX41-202ENST00000503078 MYO1FO00160 1098 aa26.77■■□□□ 1.88
DDX41-202ENST00000503078 FLOT1O75955 427 aa26.77■■□□□ 1.88
DDX41-202ENST00000503078 TTLL1O95922 423 aa26.77■■□□□ 1.88
DDX41-202ENST00000503078 PON1P27169 355 aa26.77■■□□□ 1.88
DDX41-202ENST00000503078 SLC12A3P55017 1021 aa26.77■■□□□ 1.88
DDX41-202ENST00000503078 ZNF844Q08AG5 666 aa26.77■■□□□ 1.88
DDX41-202ENST00000503078 EXOC3L4Q17RC7 722 aa26.77■■□□□ 1.88
DDX41-202ENST00000503078 RUFY4Q6ZNE9 571 aa26.77■■□□□ 1.88
DDX41-202ENST00000503078 OR2W6PQ8NHA6 318 aa26.77■■□□□ 1.88
DDX41-202ENST00000503078 UIMC1Q96RL1 719 aa26.77■■□□□ 1.88
DDX41-202ENST00000503078 NEUROG2Q9H2A3 272 aa26.77■■□□□ 1.88
DDX41-202ENST00000503078 CCNL1Q9UK58 526 aaPredicted RBP26.77■■□□□ 1.88
DDX41-202ENST00000503078 ATP8B3O60423 1300 aa26.76■■□□□ 1.88
DDX41-202ENST00000503078 ANXA13P27216 316 aa26.76■■□□□ 1.87
DDX41-202ENST00000503078 BIRC3Q13489 604 aa26.76■■□□□ 1.87
DDX41-202ENST00000503078 CABS1Q96KC9 395 aa26.76■■□□□ 1.87
DDX41-202ENST00000503078 DDX47Q9H0S4 455 aaKnown RBP26.76■■□□□ 1.87
DDX41-202ENST00000503078 DHX36Q9H2U1 1008 aaKnown RBP26.76■■□□□ 1.87
DDX41-202ENST00000503078 ZBTB5O15062 677 aa26.76■■□□□ 1.87
DDX41-202ENST00000503078 MED24O75448 989 aa26.76■■□□□ 1.87
DDX41-202ENST00000503078 UFL1O94874 794 aa26.76■■□□□ 1.87
DDX41-202ENST00000503078 CASP5P51878 434 aa26.76■■□□□ 1.87
DDX41-202ENST00000503078 RBM46Q8TBY0 533 aaKnown RBP26.76■■□□□ 1.87
DDX41-202ENST00000503078 KCNMB3Q9NPA1 279 aa26.76■■□□□ 1.87
DDX41-202ENST00000503078 PPANQ9NQ55 473 aaKnown RBP26.76■■□□□ 1.87
DDX41-202ENST00000503078 NENFQ9UMX5 172 aa26.76■■□□□ 1.87
DDX41-202ENST00000503078 TMCO5BA8MYB1 307 aa26.75■■□□□ 1.87
DDX41-202ENST00000503078 KRIT1O00522 736 aa26.75■■□□□ 1.87
DDX41-202ENST00000503078 MTMR3Q13615 1198 aa26.75■■□□□ 1.87
DDX41-202ENST00000503078 PTPROQ16827 1216 aa26.75■■□□□ 1.87
DDX41-202ENST00000503078 RNF187Q5TA31 235 aaPredicted RBP26.75■■□□□ 1.87
DDX41-202ENST00000503078 PEX26Q7Z412 305 aa26.75■■□□□ 1.87
DDX41-202ENST00000503078 AMIGO3Q86WK7 504 aa26.75■■□□□ 1.87
DDX41-202ENST00000503078 DNAAF5Q86Y56 855 aa26.75■■□□□ 1.87
DDX41-202ENST00000503078 LMBR1Q8WVP7 490 aa26.75■■□□□ 1.87
DDX41-202ENST00000503078 SLC12A6Q9UHW9 1150 aa26.75■■□□□ 1.87
DDX41-202ENST00000503078 RTCBQ9Y3I0 505 aaKnown RBP26.75■■□□□ 1.87
DDX41-202ENST00000503078 FOCADQ5VW36 1801 aa26.75■■□□□ 1.87
DDX41-202ENST00000503078 SLFN11Q7Z7L1 901 aa26.75■■□□□ 1.87
DDX41-202ENST00000503078 RASGEF1CQ8N431 466 aa26.75■■□□□ 1.87
DDX41-202ENST00000503078 ARHGEF1Q92888 912 aaKnown RBP26.75■■□□□ 1.87
DDX41-202ENST00000503078 USP17L10C9JJH3 530 aa26.74■■□□□ 1.87
DDX41-202ENST00000503078 XRCC5P13010 732 aaKnown RBP26.74■■□□□ 1.87
DDX41-202ENST00000503078 SLC16A2P36021 539 aa26.74■■□□□ 1.87
DDX41-202ENST00000503078 IRX3P78415 501 aaPredicted RBP26.74■■□□□ 1.87
DDX41-202ENST00000503078 KNOP1Q1ED39 458 aaKnown RBP26.74■■□□□ 1.87
DDX41-202ENST00000503078 C6orf89Q6UWU4 347 aa26.74■■□□□ 1.87
DDX41-202ENST00000503078 CYFIP2Q96F07 1278 aa26.74■■□□□ 1.87
DDX41-202ENST00000503078 SUCLA2Q9P2R7 463 aaPredicted RBP26.74■■□□□ 1.87
DDX41-202ENST00000503078 FBXL5Q9UKA1 691 aa26.74■■□□□ 1.87
DDX41-202ENST00000503078 STXBP5LQ9Y2K9 1186 aa26.74■■□□□ 1.87
DDX41-202ENST00000503078 IFT88Q13099 833 aa26.73■■□□□ 1.87
DDX41-202ENST00000503078 PICALMQ13492 652 aa26.73■■□□□ 1.87
DDX41-202ENST00000503078 GPATCH4Q5T3I0 446 aaKnown RBP26.73■■□□□ 1.87
DDX41-202ENST00000503078 PROCA1Q8NCQ7 364 aaPredicted RBP26.73■■□□□ 1.87
DDX41-202ENST00000503078 C3orf20Q8ND61 904 aa26.73■■□□□ 1.87
DDX41-202ENST00000503078 SLITRK6Q9H5Y7 841 aa26.73■■□□□ 1.87
DDX41-202ENST00000503078 A0A0A6YYK5 440 aaPredicted RBP26.73■■□□□ 1.87
DDX41-202ENST00000503078 POTEFA5A3E0 1075 aa26.73■■□□□ 1.87
DDX41-202ENST00000503078 GMNCA6NCL1 334 aa26.73■■□□□ 1.87
DDX41-202ENST00000503078 H2AFZP0C0S5 128 aa26.73■■□□□ 1.87
DDX41-202ENST00000503078 POTEIP0CG38 1075 aa26.73■■□□□ 1.87
DDX41-202ENST00000503078 STAT3P40763 770 aa26.73■■□□□ 1.87
DDX41-202ENST00000503078 EPHA7Q15375 998 aa26.73■■□□□ 1.87
DDX41-202ENST00000503078 AGBL2Q5U5Z8 902 aa26.73■■□□□ 1.87
DDX41-202ENST00000503078 POTEGQ6S5H5 508 aa26.73■■□□□ 1.87
DDX41-202ENST00000503078 POTEEQ6S8J3 1075 aa26.73■■□□□ 1.87
DDX41-202ENST00000503078 H2AFVQ71UI9 128 aa26.73■■□□□ 1.87
DDX41-202ENST00000503078 VPS36Q86VN1 386 aa26.73■■□□□ 1.87
DDX41-202ENST00000503078 UBLCP1Q8WVY7 318 aaPredicted RBP26.73■■□□□ 1.87
DDX41-202ENST00000503078 VCPKMTQ9H867 229 aa26.73■■□□□ 1.87
DDX41-202ENST00000503078 ATP2B4P23634 1241 aa26.72■■□□□ 1.87
DDX41-202ENST00000503078 ACTN3Q08043 901 aaPredicted RBP26.72■■□□□ 1.87
DDX41-202ENST00000503078 GIT2Q14161 759 aa26.72■■□□□ 1.87
DDX41-202ENST00000503078 SYCE1Q8N0S2 351 aa26.72■■□□□ 1.87
DDX41-202ENST00000503078 AMACRQ9UHK6 382 aa26.72■■□□□ 1.87
DDX41-202ENST00000503078 CALUO43852 315 aaPredicted RBP26.72■■□□□ 1.87
DDX41-202ENST00000503078 EPM2AIP1Q7L775 607 aaPredicted RBP26.72■■□□□ 1.87
DDX41-202ENST00000503078 CCDC26Q8TAB7 109 aa26.72■■□□□ 1.87
DDX41-202ENST00000503078 TBC1D22AQ8WUA7 517 aa26.72■■□□□ 1.87
DDX41-202ENST00000503078 INTUQ9ULD6 942 aa26.72■■□□□ 1.87
DDX41-202ENST00000503078 DAGLAQ9Y4D2 1042 aa26.72■■□□□ 1.87
DDX41-202ENST00000503078 TAF1LQ8IZX4 1826 aa26.72■■□□□ 1.87
DDX41-202ENST00000503078 USP17L15C9J2P7 530 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 USP17L13C9JLJ4 530 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 USP17L11C9JVI0 530 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 USP17L18D6R9N7 530 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 USP17L22D6RA61 530 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 USP17L17D6RBQ6 530 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 USP17L19D6RCP7 530 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 USP17L20D6RJB6 530 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 PDXKO00764 312 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 DAPK3O43293 454 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 ITGA4P13612 1032 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms