RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 CAGE1Q8TC20 777 aa28.21■■■□□ 2.11
LSM6-202ENST00000502781 WNT8BQ93098 351 aa28.21■■■□□ 2.11
LSM6-202ENST00000502781 GDF15Q99988 308 aa28.21■■■□□ 2.11
LSM6-202ENST00000502781 WRAP73Q9P2S5 460 aaPredicted RBP28.21■■■□□ 2.11
LSM6-202ENST00000502781 UMODL1Q5DID0 1318 aa28.21■■■□□ 2.11
LSM6-202ENST00000502781 ZSCAN22P10073 491 aaPredicted RBP28.2■■■□□ 2.1
LSM6-202ENST00000502781 TECP42680 631 aa28.2■■■□□ 2.1
LSM6-202ENST00000502781 IL17AQ16552 155 aa28.2■■■□□ 2.1
LSM6-202ENST00000502781 XKR3Q5GH77 459 aa28.2■■■□□ 2.1
LSM6-202ENST00000502781 ZNF484Q5JVG2 852 aa28.2■■■□□ 2.1
LSM6-202ENST00000502781 IGSF22Q8N9C0 903 aa28.2■■■□□ 2.1
LSM6-202ENST00000502781 EIF2AK1Q9BQI3 630 aaKnown RBP28.2■■■□□ 2.1
LSM6-202ENST00000502781 PPP1R12CQ9BZL4 782 aa28.2■■■□□ 2.1
LSM6-202ENST00000502781 RGL1Q9NZL6 768 aa28.2■■■□□ 2.1
LSM6-202ENST00000502781 TUBE1Q9UJT0 475 aa28.2■■■□□ 2.1
LSM6-202ENST00000502781 WDR81Q562E7 1941 aa28.2■■■□□ 2.1
LSM6-202ENST00000502781 MYH9P35579 1960 aaKnown RBP28.2■■■□□ 2.1
LSM6-202ENST00000502781 TRIP12Q14669 1992 aaPredicted RBP28.2■■■□□ 2.1
LSM6-202ENST00000502781 LTBP2Q14767 1821 aa28.19■■■□□ 2.1
LSM6-202ENST00000502781 SLITRK3O94933 977 aa28.19■■■□□ 2.1
LSM6-202ENST00000502781 BMP15O95972 392 aa28.19■■■□□ 2.1
LSM6-202ENST00000502781 MAGEA10P43363 369 aaPredicted RBP28.19■■■□□ 2.1
LSM6-202ENST00000502781 BFSP2Q13515 415 aa28.19■■■□□ 2.1
LSM6-202ENST00000502781 PDIA5Q14554 519 aa28.19■■■□□ 2.1
LSM6-202ENST00000502781 ARL6IP4Q66PJ3 421 aaKnown RBP28.19■■■□□ 2.1
LSM6-202ENST00000502781 MFSD5Q6N075 450 aa28.19■■■□□ 2.1
LSM6-202ENST00000502781 C4orf19Q8IY42 314 aa28.19■■■□□ 2.1
LSM6-202ENST00000502781 NEK9Q8TD19 979 aa28.19■■■□□ 2.1
LSM6-202ENST00000502781 TRAPPC12Q8WVT3 735 aa28.19■■■□□ 2.1
LSM6-202ENST00000502781 BADQ92934 168 aa28.19■■■□□ 2.1
LSM6-202ENST00000502781 LXNQ9BS40 222 aa28.19■■■□□ 2.1
LSM6-202ENST00000502781 WNT8AQ9H1J5 351 aa28.19■■■□□ 2.1
LSM6-202ENST00000502781 NRBP2Q9NSY0 501 aa28.19■■■□□ 2.1
LSM6-202ENST00000502781 DKC1O60832 514 aaKnown RBP eCLIP28.18■■■□□ 2.1
LSM6-202ENST00000502781 CYP2C18P33260 490 aa28.18■■■□□ 2.1
LSM6-202ENST00000502781 SF3A1Q15459 793 aaKnown RBP28.18■■■□□ 2.1
LSM6-202ENST00000502781 RPAINQ86UA6 219 aa28.18■■■□□ 2.1
LSM6-202ENST00000502781 CCDC155Q8N6L0 562 aa28.18■■■□□ 2.1
LSM6-202ENST00000502781 DYDC2Q96IM9 177 aa28.18■■■□□ 2.1
LSM6-202ENST00000502781 NIFKQ9BYG3 293 aaKnown RBP28.18■■■□□ 2.1
LSM6-202ENST00000502781 LYPLA2O95372 231 aa28.17■■■□□ 2.1
LSM6-202ENST00000502781 F13A1P00488 732 aa28.17■■■□□ 2.1
LSM6-202ENST00000502781 IGBP1P78318 339 aa28.17■■■□□ 2.1
LSM6-202ENST00000502781 TARBP2Q15633 366 aaKnown RBP28.17■■■□□ 2.1
LSM6-202ENST00000502781 TMEM266Q2M3C6 531 aa28.17■■■□□ 2.1
LSM6-202ENST00000502781 TAF2Q6P1X5 1199 aa28.17■■■□□ 2.1
LSM6-202ENST00000502781 PRO3102Q9H379 93 aa28.17■■■□□ 2.1
LSM6-202ENST00000502781 ZSWIM4Q9H7M6 989 aa28.17■■■□□ 2.1
LSM6-202ENST00000502781 CEP131Q9UPN4 1083 aa28.17■■■□□ 2.1
LSM6-202ENST00000502781 KAT6AQ92794 2004 aa28.16■■■□□ 2.1
LSM6-202ENST00000502781 SPATA31C1P0DKV0 1188 aa28.16■■■□□ 2.1
LSM6-202ENST00000502781 MDM2Q00987 491 aaPredicted RBP28.16■■■□□ 2.1
LSM6-202ENST00000502781 PTPAQ15257 358 aa28.16■■■□□ 2.1
LSM6-202ENST00000502781 MTHFD1LQ6UB35 978 aa28.16■■■□□ 2.1
LSM6-202ENST00000502781 RUFY4Q6ZNE9 571 aa28.16■■■□□ 2.1
LSM6-202ENST00000502781 ANO5Q75V66 913 aa28.16■■■□□ 2.1
LSM6-202ENST00000502781 CEP89Q96ST8 783 aa28.16■■■□□ 2.1
LSM6-202ENST00000502781 LBHD1Q9BQE6 289 aaPredicted RBP28.16■■■□□ 2.1
LSM6-202ENST00000502781 PCDHA2Q9Y5H9 948 aa28.16■■■□□ 2.1
LSM6-202ENST00000502781 CAND2O75155 1236 aa28.15■■■□□ 2.1
LSM6-202ENST00000502781 BRD1O95696 1058 aa28.15■■■□□ 2.1
LSM6-202ENST00000502781 CKBP12277 381 aa28.15■■■□□ 2.1
LSM6-202ENST00000502781 CYP4A11Q02928 519 aa28.15■■■□□ 2.1
LSM6-202ENST00000502781 CTTNQ14247 550 aaKnown RBP28.15■■■□□ 2.1
LSM6-202ENST00000502781 TRAF7Q6Q0C0 670 aa28.15■■■□□ 2.1
LSM6-202ENST00000502781 DTHD1Q6ZMT9 781 aa28.15■■■□□ 2.1
LSM6-202ENST00000502781 TRMT1LQ7Z2T5 733 aaKnown RBP28.15■■■□□ 2.1
LSM6-202ENST00000502781 ZBTB10Q96DT7 871 aa28.15■■■□□ 2.1
LSM6-202ENST00000502781 POLR3CQ9BUI4 534 aaPredicted RBP28.15■■■□□ 2.1
LSM6-202ENST00000502781 FTOQ9C0B1 505 aaKnown RBP eCLIP28.15■■■□□ 2.1
LSM6-202ENST00000502781 CLIC4Q9Y696 253 aa28.15■■■□□ 2.1
LSM6-202ENST00000502781 C22orf31O95567 290 aa28.14■■■□□ 2.1
LSM6-202ENST00000502781 KLRC1P26715 233 aa28.14■■■□□ 2.1
LSM6-202ENST00000502781 USP28Q96RU2 1077 aa28.14■■■□□ 2.1
LSM6-202ENST00000502781 RAB34Q9BZG1 259 aa28.14■■■□□ 2.1
LSM6-202ENST00000502781 TUFT1Q9NNX1 390 aa28.14■■■□□ 2.1
LSM6-202ENST00000502781 LRWD1Q9UFC0 647 aa28.14■■■□□ 2.1
LSM6-202ENST00000502781 ZDHHC9Q9Y397 364 aa28.14■■■□□ 2.1
LSM6-202ENST00000502781 MORC2Q9Y6X9 1032 aaPredicted RBP28.14■■■□□ 2.1
LSM6-202ENST00000502781 IQCF3P0C7M6 154 aa28.13■■■□□ 2.09
LSM6-202ENST00000502781 SELPP16109 830 aa28.13■■■□□ 2.09
LSM6-202ENST00000502781 RPA1P27694 616 aa28.13■■■□□ 2.09
LSM6-202ENST00000502781 BMP8BP34820 402 aa28.13■■■□□ 2.09
LSM6-202ENST00000502781 CCL23P55773 120 aa28.13■■■□□ 2.09
LSM6-202ENST00000502781 CATSPER3Q86XQ3 398 aa28.13■■■□□ 2.09
LSM6-202ENST00000502781 TPH2Q8IWU9 490 aa28.13■■■□□ 2.09
LSM6-202ENST00000502781 TMEM199Q8N511 208 aa28.13■■■□□ 2.09
LSM6-202ENST00000502781 RETREG2Q8NC44 543 aa28.13■■■□□ 2.09
LSM6-202ENST00000502781 ERMNQ8TAM6 284 aa28.13■■■□□ 2.09
LSM6-202ENST00000502781 SMIM35A0A1B0GVV1 85 aa28.12■■■□□ 2.09
LSM6-202ENST00000502781 TMEM150BA6NC51 233 aa28.12■■■□□ 2.09
LSM6-202ENST00000502781 MED24O75448 989 aa28.12■■■□□ 2.09
LSM6-202ENST00000502781 FPGSQ05932 587 aa28.12■■■□□ 2.09
LSM6-202ENST00000502781 ZNF618Q5T7W0 954 aa28.12■■■□□ 2.09
LSM6-202ENST00000502781 FOXD4L5Q5VV16 416 aaPredicted RBP28.12■■■□□ 2.09
LSM6-202ENST00000502781 LINC01465Q8N7H1 131 aa28.12■■■□□ 2.09
LSM6-202ENST00000502781 FOXD4L4Q8WXT5 416 aaPredicted RBP28.12■■■□□ 2.09
LSM6-202ENST00000502781 VWCEQ96DN2 955 aa28.12■■■□□ 2.09
LSM6-202ENST00000502781 SEPT9Q9UHD8 586 aaPredicted RBP28.12■■■□□ 2.09
LSM6-202ENST00000502781 DDX11L8A8MPP1 907 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms