RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 PSTPIP2Q9H939 334 aa12.78□□□□□ -0.36
UBE2D3-211ENST00000502404 SENP2Q9HC62 589 aa12.78□□□□□ -0.36
UBE2D3-211ENST00000502404 FAM50BQ9Y247 325 aa12.78□□□□□ -0.36
UBE2D3-211ENST00000502404 BAZ2BQ9UIF8 2168 aaKnown RBP12.77□□□□□ -0.36
UBE2D3-211ENST00000502404 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 SPDYE3A6NKU9 549 aa12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 NCK2O43639 380 aa12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 PRC1O43663 620 aa12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 UPP2O95045 317 aa12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 CTSHP09668 335 aa12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 CLK2P49760 499 aaKnown RBP12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 PTPN5P54829 565 aa12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 SP4Q02446 784 aa12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 LEXMQ3ZCV2 418 aa12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 EPC2Q52LR7 807 aa12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 FAM26DQ5JW98 314 aa12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 TMEM31Q5JXX7 168 aa12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 USP17L6PQ6QN14 398 aa12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 SYNE3Q6ZMZ3 975 aa12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 SPRED2Q7Z698 418 aa12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 RPAINQ86UA6 219 aa12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 MB21D2Q8IYB1 491 aaPredicted RBP12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 IL17RAQ96F46 866 aa12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 C17orf80Q9BSJ5 609 aa12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 LY9Q9HBG7 655 aa12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 ERAP1Q9NZ08 941 aa12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 HCN4Q9Y3Q4 1203 aa12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 RWDD3Q9Y3V2 267 aa12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 SUPT16HQ9Y5B9 1047 aaKnown RBP12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 RBM8AQ9Y5S9 174 aaKnown RBP12.77□□□□□ -0.37
UBE2D3-211ENST00000502404 H3BNC9 293 aa12.76□□□□□ -0.37
UBE2D3-211ENST00000502404 MEIS2O14770 477 aa12.76□□□□□ -0.37
UBE2D3-211ENST00000502404 RB1P06400 928 aa12.76□□□□□ -0.37
UBE2D3-211ENST00000502404 TCF7P36402 384 aaPredicted RBP12.76□□□□□ -0.37
UBE2D3-211ENST00000502404 LIFRP42702 1097 aa12.76□□□□□ -0.37
UBE2D3-211ENST00000502404 ANTXR2P58335 489 aa12.76□□□□□ -0.37
UBE2D3-211ENST00000502404 MMRN1Q13201 1228 aa12.76□□□□□ -0.37
UBE2D3-211ENST00000502404 SEMA3FQ13275 785 aa12.76□□□□□ -0.37
UBE2D3-211ENST00000502404 GPM6BQ13491 265 aa12.76□□□□□ -0.37
UBE2D3-211ENST00000502404 TEX2Q8IWB9 1127 aa12.76□□□□□ -0.37
UBE2D3-211ENST00000502404 TMEM192Q8IY95 271 aa12.76□□□□□ -0.37
UBE2D3-211ENST00000502404 FIBCD1Q8N539 461 aa12.76□□□□□ -0.37
UBE2D3-211ENST00000502404 GLG1Q92896 1179 aa12.76□□□□□ -0.37
UBE2D3-211ENST00000502404 SMARCAD1Q9H4L7 1026 aa12.76□□□□□ -0.37
UBE2D3-211ENST00000502404 BCAS3Q9H6U6 928 aa12.76□□□□□ -0.37
UBE2D3-211ENST00000502404 SLC12A7Q9Y666 1083 aa12.76□□□□□ -0.37
UBE2D3-211ENST00000502404 RRN3P2A6NIE6 340 aa12.75□□□□□ -0.37
UBE2D3-211ENST00000502404 KCNA5P22460 613 aa12.75□□□□□ -0.37
UBE2D3-211ENST00000502404 ADAM17P78536 824 aa12.75□□□□□ -0.37
UBE2D3-211ENST00000502404 PPFIA1Q13136 1202 aa12.75□□□□□ -0.37
UBE2D3-211ENST00000502404 MTMR1Q13613 665 aa12.75□□□□□ -0.37
UBE2D3-211ENST00000502404 FAM43BQ6ZT52 329 aaPredicted RBP12.75□□□□□ -0.37
UBE2D3-211ENST00000502404 TRIM50Q86XT4 487 aa12.75□□□□□ -0.37
UBE2D3-211ENST00000502404 BANK1Q8NDB2 785 aa12.75□□□□□ -0.37
UBE2D3-211ENST00000502404 LMBR1Q8WVP7 490 aa12.75□□□□□ -0.37
UBE2D3-211ENST00000502404 PCMTD1Q96MG8 357 aaPredicted RBP12.75□□□□□ -0.37
UBE2D3-211ENST00000502404 EPHX3Q9H6B9 360 aa12.75□□□□□ -0.37
UBE2D3-211ENST00000502404 M0QZ92 97 aa12.74□□□□□ -0.37
UBE2D3-211ENST00000502404 SH2B2O14492 632 aaPredicted RBP12.74□□□□□ -0.37
UBE2D3-211ENST00000502404 GPR37L1O60883 481 aa12.74□□□□□ -0.37
UBE2D3-211ENST00000502404 PLA2G5P39877 138 aa12.74□□□□□ -0.37
UBE2D3-211ENST00000502404 RNF20Q5VTR2 975 aa12.74□□□□□ -0.37
UBE2D3-211ENST00000502404 IER5Q5VY09 327 aa12.74□□□□□ -0.37
UBE2D3-211ENST00000502404 PTCRAQ6ISU1 281 aaPredicted RBP12.74□□□□□ -0.37
UBE2D3-211ENST00000502404 GJD3Q8N144 294 aa12.74□□□□□ -0.37
UBE2D3-211ENST00000502404 SRBD1Q8N5C6 995 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-211ENST00000502404 C11orf84Q9BUA3 381 aaPredicted RBP12.74□□□□□ -0.37
UBE2D3-211ENST00000502404 MYL10Q9BUA6 226 aa12.74□□□□□ -0.37
UBE2D3-211ENST00000502404 LMAN2LQ9H0V9 348 aa12.74□□□□□ -0.37
UBE2D3-211ENST00000502404 NSUN3Q9H649 340 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-211ENST00000502404 AZI2Q9H6S1 392 aa12.74□□□□□ -0.37
UBE2D3-211ENST00000502404 LIMD1Q9UGP4 676 aa12.74□□□□□ -0.37
UBE2D3-211ENST00000502404 TUBE1Q9UJT0 475 aa12.74□□□□□ -0.37
UBE2D3-211ENST00000502404 TAF6LQ9Y6J9 622 aa12.74□□□□□ -0.37
UBE2D3-211ENST00000502404 MUC3AQ02505 3323 aa12.73□□□□□ -0.37
UBE2D3-211ENST00000502404 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-211ENST00000502404 PI4K2BG5E9Z4 385 aa12.73□□□□□ -0.37
UBE2D3-211ENST00000502404 FOSP01100 380 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-211ENST00000502404 CHRNA1P02708 482 aa12.73□□□□□ -0.37
UBE2D3-211ENST00000502404 ALADP13716 330 aa12.73□□□□□ -0.37
UBE2D3-211ENST00000502404 KCNA2P16389 499 aa12.73□□□□□ -0.37
UBE2D3-211ENST00000502404 NDUFV2P19404 249 aa12.73□□□□□ -0.37
UBE2D3-211ENST00000502404 GRIK4Q16099 956 aa12.73□□□□□ -0.37
UBE2D3-211ENST00000502404 EP400NLQ6ZTU2 488 aa12.73□□□□□ -0.37
UBE2D3-211ENST00000502404 FANCBQ8NB91 859 aa12.73□□□□□ -0.37
UBE2D3-211ENST00000502404 SDF4Q9BRK5 362 aa12.73□□□□□ -0.37
UBE2D3-211ENST00000502404 LRFN3Q9BTN0 628 aa12.73□□□□□ -0.37
UBE2D3-211ENST00000502404 FTHL17Q9BXU8 183 aa12.73□□□□□ -0.37
UBE2D3-211ENST00000502404 GLT8D2Q9H1C3 349 aa12.73□□□□□ -0.37
UBE2D3-211ENST00000502404 JADE2Q9NQC1 790 aa12.73□□□□□ -0.37
UBE2D3-211ENST00000502404 HCSTQ9UBK5 93 aa12.73□□□□□ -0.37
UBE2D3-211ENST00000502404 PCDHA6Q9UN73 950 aa12.73□□□□□ -0.37
UBE2D3-211ENST00000502404 PCDHB3Q9Y5E6 796 aa12.73□□□□□ -0.37
UBE2D3-211ENST00000502404 PCDHA8Q9Y5H6 950 aa12.73□□□□□ -0.37
UBE2D3-211ENST00000502404 UBIAD1Q9Y5Z9 338 aa12.73□□□□□ -0.37
UBE2D3-211ENST00000502404 GSTTP1A0A1W2PQM5 241 aa12.72□□□□□ -0.37
UBE2D3-211ENST00000502404 MBLAC1A4D2B0 266 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-211ENST00000502404 ATP9AO75110 1047 aa12.72□□□□□ -0.37
UBE2D3-211ENST00000502404 PLEKHA8P1O95397 391 aa12.72□□□□□ -0.37
UBE2D3-211ENST00000502404 GHRP10912 638 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms