RNA–Protein interactions for RNA: ENST00000502254.5

PTPN20-212, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-212ENST00000502254 CCDC12Q8WUD4 166 aaPredicted RBP6.37□□□□□ -1.39
PTPN20-212ENST00000502254 ATG4CQ96DT6 458 aa6.37□□□□□ -1.39
PTPN20-212ENST00000502254 MTMR8Q96EF0 704 aa6.37□□□□□ -1.39
PTPN20-212ENST00000502254 ZNF837Q96EG3 531 aaPredicted RBP6.37□□□□□ -1.39
PTPN20-212ENST00000502254 SLC30A3Q99726 388 aa6.37□□□□□ -1.39
PTPN20-212ENST00000502254 PHF20Q9BVI0 1012 aa6.37□□□□□ -1.39
PTPN20-212ENST00000502254 AMNQ9BXJ7 453 aa6.37□□□□□ -1.39
PTPN20-212ENST00000502254 BCO2Q9BYV7 579 aa6.37□□□□□ -1.39
PTPN20-212ENST00000502254 RANBP17Q9H2T7 1088 aaKnown RBP6.37□□□□□ -1.39
PTPN20-212ENST00000502254 ZSCAN16Q9H4T2 348 aaPredicted RBP6.37□□□□□ -1.39
PTPN20-212ENST00000502254 RAVER2Q9HCJ3 691 aaKnown RBP6.37□□□□□ -1.39
PTPN20-212ENST00000502254 C6orf50Q9HD87 102 aa6.37□□□□□ -1.39
PTPN20-212ENST00000502254 SH3GLB2Q9NR46 395 aa6.37□□□□□ -1.39
PTPN20-212ENST00000502254 PPP1R9AQ9ULJ8 1098 aa6.37□□□□□ -1.39
PTPN20-212ENST00000502254 ATXN7L1Q9ULK2 861 aaPredicted RBP6.37□□□□□ -1.39
PTPN20-212ENST00000502254 ABT1Q9ULW3 272 aaKnown RBP6.37□□□□□ -1.39
PTPN20-212ENST00000502254 PCDHA1Q9Y5I3 950 aa6.37□□□□□ -1.39
PTPN20-212ENST00000502254 ATP6V1DQ9Y5K8 247 aa6.37□□□□□ -1.39
PTPN20-212ENST00000502254 PASKQ96RG2 1323 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 CCL15-CCL14A0A0B4J2E2 113 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 hCG_1984214I3L0E3 225 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 ADAMTS3O15072 1205 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 BAG4O95429 457 aaKnown RBP6.36□□□□□ -1.39
PTPN20-212ENST00000502254 CETPP11597 493 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 EDN3P14138 238 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 ADCY7P51828 1080 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 GTF2A2P52657 109 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 IRX3P78415 501 aaPredicted RBP6.36□□□□□ -1.39
PTPN20-212ENST00000502254 CEBPZQ03701 1054 aaKnown RBP6.36□□□□□ -1.39
PTPN20-212ENST00000502254 GRM1Q13255 1194 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 PLS1Q14651 629 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 COG2Q14746 738 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 CCL15Q16663 113 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 UBE2SQ16763 222 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 JAKMIP3Q5VZ66 844 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 GPAT2Q6NUI2 795 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 ZNF713Q8N859 430 aaPredicted RBP6.36□□□□□ -1.39
PTPN20-212ENST00000502254 RASGRP4Q8TDF6 673 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 ABHD17AQ96GS6 310 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 ZNF396Q96N95 335 aaPredicted RBP6.36□□□□□ -1.39
PTPN20-212ENST00000502254 GBP4Q96PP9 640 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 P2RX7Q99572 595 aaKnown RBP6.36□□□□□ -1.39
PTPN20-212ENST00000502254 TGIF2Q9GZN2 237 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 PSTPIP2Q9H939 334 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 HOXC10Q9NYD6 342 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 GMPR2Q9P2T1 348 aaKnown RBP6.36□□□□□ -1.39
PTPN20-212ENST00000502254 CCPG1Q9ULG6 757 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 PCDHA4Q9UN74 947 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.36□□□□□ -1.39
PTPN20-212ENST00000502254 POLR2AP24928 1970 aaKnown RBP6.36□□□□□ -1.39
PTPN20-212ENST00000502254 MYH8P13535 1937 aa6.36□□□□□ -1.39
PTPN20-212ENST00000502254 DOCK1Q14185 1865 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 UTRNP46939 3433 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 CCDC194A0A1B0GVG4 234 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 BTBD19C9JJ37 291 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 VWA5AO00534 786 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 USP17L7P0C7H9 530 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 RARAP10276 462 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 ALAS1P13196 640 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 SNRPBP14678 240 aaKnown RBP6.35□□□□□ -1.39
PTPN20-212ENST00000502254 NFKB1P19838 968 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 U2AF2P26368 475 aaKnown RBP eCLIP6.35□□□□□ -1.39
PTPN20-212ENST00000502254 GNA11P29992 359 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 MRPL12P52815 198 aaKnown RBP6.35□□□□□ -1.39
PTPN20-212ENST00000502254 KRT85P78386 507 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 FSTL1Q12841 308 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 TRAF1Q13077 416 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 PABPC4Q13310 644 aaKnown RBP eCLIP6.35□□□□□ -1.39
PTPN20-212ENST00000502254 MOGSQ13724 837 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 TAF1CQ15572 869 aaPredicted RBP6.35□□□□□ -1.39
PTPN20-212ENST00000502254 NPY5RQ15761 445 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 NAALADL2Q58DX5 795 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 COL13A1Q5TAT6 717 aaPredicted RBP6.35□□□□□ -1.39
PTPN20-212ENST00000502254 GALNT17Q6IS24 598 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 RGMBQ6NW40 437 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 PIK3AP1Q6ZUJ8 805 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 KRT25Q7Z3Z0 450 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 BRAPQ7Z569 592 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 SAPCD2Q86UD0 394 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 RASAL3Q86YV0 1011 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 NOSTRINQ8IVI9 506 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 C3orf58Q8NDZ4 430 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 BICD2Q8TD16 824 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 BRI3BPQ8WY22 251 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 CUL5Q93034 780 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 GTPBP3Q969Y2 492 aaKnown RBP6.35□□□□□ -1.39
PTPN20-212ENST00000502254 PGBD1Q96JS3 809 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 PAGR1Q9BTK6 254 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 FTOQ9C0B1 505 aaKnown RBP eCLIP6.35□□□□□ -1.39
PTPN20-212ENST00000502254 ZMYND12Q9H0C1 365 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 ASCC2Q9H1I8 757 aaPredicted RBP6.35□□□□□ -1.39
PTPN20-212ENST00000502254 FOXP1Q9H334 677 aaPredicted RBP6.35□□□□□ -1.39
PTPN20-212ENST00000502254 SLC38A10Q9HBR0 1119 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 RIC8AQ9NPQ8 531 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 LATS2Q9NRM7 1088 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 HOMER2Q9NSB8 354 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 TMEM260Q9NX78 707 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 KANSL3Q9P2N6 904 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 AGTPBP1Q9UPW5 1226 aa6.35□□□□□ -1.39
PTPN20-212ENST00000502254 CNPY2Q9Y2B0 182 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms