RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 GNA14O95837 355 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 SSBP05455 408 aaKnown RBP eCLIP12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 PLEKP08567 350 aaPredicted RBP12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 FGRP09769 529 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 TROAPQ12815 778 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 SLC18A3Q16572 532 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 BZW1Q7L1Q6 419 aaKnown RBP12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 BLIDQ8IZY5 108 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 DAGLBQ8NCG7 672 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 CFAP61Q8NHU2 1237 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 NLRP3Q96P20 1036 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 CRAMP1Q96RY5 1269 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 ZKSCAN3Q9BRR0 538 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 TRIM9Q9C026 710 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 RAB17Q9H0T7 212 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 ARMT1Q9H993 441 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 CPSF2Q9P2I0 782 aaKnown RBP12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 CNTNAP5Q8WYK1 1306 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 AHCYL1O43865 530 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 KLK7P49862 253 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 USP11P51784 963 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 MAGOHP61326 146 aaKnown RBP12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 TRAF1Q13077 416 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 QPCTQ16769 361 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 CMPK2Q5EBM0 449 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 CHADLQ6NUI6 762 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 TRPM8Q7Z2W7 1104 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 SYCE1Q8N0S2 351 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 CMTR1Q8N1G2 835 aaKnown RBP12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 GUF1Q8N442 669 aaKnown RBP12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 ENAHQ8N8S7 591 aaPredicted RBP12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 MAGOHBQ96A72 148 aaKnown RBP12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 SHISA4Q96DD7 197 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 RBM17Q96I25 401 aaKnown RBP12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 MS4A14Q96JA4 679 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 HINFPQ9BQA5 517 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 PCDHA4Q9UN74 947 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 UTP11Q9Y3A2 253 aaKnown RBP12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 ATP6V0A2Q9Y487 856 aa12.01□□□□□ -0.49
AC055717.1-201ENST00000502221 PCNTO95613 3336 aa12□□□□□ -0.49
AC055717.1-201ENST00000502221 CCDC194A0A1B0GVG4 234 aa12□□□□□ -0.49
AC055717.1-201ENST00000502221 ESYT3A0FGR9 886 aa12□□□□□ -0.49
AC055717.1-201ENST00000502221 NUDT17P0C025 328 aa12□□□□□ -0.49
AC055717.1-201ENST00000502221 ITGA6P23229 1130 aa12□□□□□ -0.49
AC055717.1-201ENST00000502221 ECHS1P30084 290 aa12□□□□□ -0.49
AC055717.1-201ENST00000502221 GNAQP50148 359 aa12□□□□□ -0.49
AC055717.1-201ENST00000502221 ERVK-9P63128 1117 aa12□□□□□ -0.49
AC055717.1-201ENST00000502221 UAP1Q16222 522 aaPredicted RBP12□□□□□ -0.49
AC055717.1-201ENST00000502221 KRT71Q3SY84 523 aa12□□□□□ -0.49
AC055717.1-201ENST00000502221 HGSNATQ68CP4 663 aa12□□□□□ -0.49
AC055717.1-201ENST00000502221 UBLCP1Q8WVY7 318 aaPredicted RBP12□□□□□ -0.49
AC055717.1-201ENST00000502221 ANKS1AQ92625 1134 aa12□□□□□ -0.49
AC055717.1-201ENST00000502221 ZNF317Q96PQ6 595 aaPredicted RBP12□□□□□ -0.49
AC055717.1-201ENST00000502221 PSMB7Q99436 277 aa12□□□□□ -0.49
AC055717.1-201ENST00000502221 INCENPQ9NQS7 918 aa12□□□□□ -0.49
AC055717.1-201ENST00000502221 ETAA1Q9NY74 926 aa12□□□□□ -0.49
AC055717.1-201ENST00000502221 CTNNAL1Q9UBT7 734 aa12□□□□□ -0.49
AC055717.1-201ENST00000502221 TTC7AQ9ULT0 858 aaPredicted RBP12□□□□□ -0.49
AC055717.1-201ENST00000502221 TACC3Q9Y6A5 838 aa12□□□□□ -0.49
AC055717.1-201ENST00000502221 O00370 1275 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 CTNND1O60716 968 aaKnown RBP11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 PPFIA2O75334 1257 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 SMNDC1O75940 238 aaKnown RBP eCLIP11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 FESP07332 822 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 RPSAP08865 295 aaKnown RBP11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 NQO1P15559 274 aaKnown RBP11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 FGFR2P21802 821 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 SLC1A4P43007 532 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 PDE6CP51160 858 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 CCNHP51946 323 aaPredicted RBP11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 ASIC1P78348 528 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 GFPT1Q06210 699 aaPredicted RBP11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 MYO1EQ12965 1108 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 SF3B3Q15393 1217 aaKnown RBP11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 TDRD12Q587J7 1177 aaKnown RBP11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 C6orf118Q5T5N4 469 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 MIS18BP1Q6P0N0 1132 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 TMC3Q7Z5M5 1100 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 CELF1Q92879 486 aaKnown RBP11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 NAP1L3Q99457 506 aaPredicted RBP11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 TMEM109Q9BVC6 243 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 TMX4Q9H1E5 349 aaPredicted RBP11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 FAM207AQ9NSI2 230 aaPredicted RBP11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 AIPL1Q9NZN9 384 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 STK17AQ9UEE5 414 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 CNOT7Q9UIV1 285 aaKnown RBP11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 SALL4Q9UJQ4 1053 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 FBXL5Q9UKA1 691 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 F8W031 263 aaPredicted RBP11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 STXBP3O00186 592 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 WNT7AO00755 349 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 BUB1O43683 1085 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 PPP1R12BO60237 982 aaPredicted RBP11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 PRDM1O75626 825 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 SNUPNO95149 360 aaKnown RBP11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 KIF4AO95239 1232 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 AGTP01019 485 aa11.99□□□□□ -0.49
AC055717.1-201ENST00000502221 NEFHP12036 1026 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms